RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 CCZ1BP86790 482 aa18.35■□□□□ 0.53
CNKSR1-207ENST00000482227 CCZ1P86791 482 aaPredicted RBP18.35■□□□□ 0.53
CNKSR1-207ENST00000482227 MRFAP1L1Q96HT8 127 aa18.35■□□□□ 0.53
CNKSR1-207ENST00000482227 STAG3Q9UJ98 1225 aa18.35■□□□□ 0.53
CNKSR1-207ENST00000482227 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
CNKSR1-207ENST00000482227 TULP2O00295 520 aa18.35■□□□□ 0.53
CNKSR1-207ENST00000482227 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
CNKSR1-207ENST00000482227 NEMFO60524 1076 aa18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 PDIA4P13667 645 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 TRMT1Q9NXH9 659 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 CAPN2P17655 700 aa18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 PDCP20941 246 aa18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 LARP1Q6PKG0 1096 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 C11orf57Q6ZUT1 292 aaPredicted RBP18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 USP16Q9Y5T5 823 aa18.34■□□□□ 0.53
CNKSR1-207ENST00000482227 SRGAP3O43295 1099 aa18.33■□□□□ 0.53
CNKSR1-207ENST00000482227 SLU7O95391 586 aaKnown RBP18.33■□□□□ 0.53
CNKSR1-207ENST00000482227 CCAR2Q8N163 923 aaKnown RBP18.33■□□□□ 0.53
CNKSR1-207ENST00000482227 C3P01024 1663 aa18.33■□□□□ 0.52
CNKSR1-207ENST00000482227 FAM193AP78312 1265 aa18.33■□□□□ 0.52
CNKSR1-207ENST00000482227 CRYBG1Q9Y4K1 1723 aa18.33■□□□□ 0.52
CNKSR1-207ENST00000482227 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 CCDC69A6NI79 296 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 CAVIN2O95810 425 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 H2AFXP16104 143 aaPredicted RBP18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 SLC20A2Q08357 652 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 CALCOCO1Q9P1Z2 691 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 CDK11BP21127 795 aaKnown RBP18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 CREB3L3Q68CJ9 461 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 ADCY9O60503 1353 aa18.32■□□□□ 0.52
CNKSR1-207ENST00000482227 CYP2C19P33261 490 aa18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 KCND1Q9NSA2 647 aa18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 RBM8AQ9Y5S9 174 aaKnown RBP18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 RGPD1P0DJD0 1748 aa18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 NPHP1O15259 732 aa18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 ZKSCAN1P17029 563 aaPredicted RBP18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 TCEANC2Q96MN5 208 aa18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 FHOD1Q9Y613 1164 aa18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 PXDNLA1KZ92 1463 aa18.31■□□□□ 0.52
CNKSR1-207ENST00000482227 GOLGA6L19H0YKK7 550 aa18.3■□□□□ 0.52
CNKSR1-207ENST00000482227 FILIP1Q7Z7B0 1213 aa18.3■□□□□ 0.52
CNKSR1-207ENST00000482227 CREBRFQ8IUR6 639 aa18.3■□□□□ 0.52
CNKSR1-207ENST00000482227 IPO4Q8TEX9 1081 aaKnown RBP18.3■□□□□ 0.52
CNKSR1-207ENST00000482227 NBPF7P0C2Y1 421 aaPredicted RBP18.3■□□□□ 0.52
CNKSR1-207ENST00000482227 LRRN4CLQ8ND94 238 aa18.3■□□□□ 0.52
CNKSR1-207ENST00000482227 PRR36Q9H6K5 1346 aa18.3■□□□□ 0.52
CNKSR1-207ENST00000482227 ERCC6LQ2NKX8 1250 aa18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 NOL10Q9BSC4 688 aaKnown RBP18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 PHAXQ9H814 394 aaKnown RBP18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 L2HGDHQ9H9P8 463 aa18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 PEAK1Q9H792 1746 aa18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 KIF13AQ9H1H9 1805 aa18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 MAP4K1Q92918 833 aa18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 TAF6LQ9Y6J9 622 aa18.29■□□□□ 0.52
CNKSR1-207ENST00000482227 TOB2Q14106 344 aaPredicted RBP18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 BMS1Q14692 1282 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 TXNDC2Q86VQ3 553 aa18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 FAM208AQ9UK61 1670 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 OVOS2A0A0J9YW53 1432 aa18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 OVOS2Q6IE36 1432 aa18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 SLC27A2O14975 620 aa18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 GIGYF1O75420 1035 aaPredicted RBP18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 DHX40Q8IX18 779 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 GTF3C6Q969F1 213 aa18.28■□□□□ 0.52
CNKSR1-207ENST00000482227 A0A087WWV3 80 aa18.27■□□□□ 0.52
CNKSR1-207ENST00000482227 CLCN6P51797 869 aa18.27■□□□□ 0.52
CNKSR1-207ENST00000482227 HNRNPH2P55795 449 aaKnown RBP18.27■□□□□ 0.52
CNKSR1-207ENST00000482227 RESTQ13127 1097 aa18.27■□□□□ 0.52
CNKSR1-207ENST00000482227 CCDC93Q567U6 631 aa18.27■□□□□ 0.52
CNKSR1-207ENST00000482227 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
CNKSR1-207ENST00000482227 DNAJC2Q99543 621 aaKnown RBP18.27■□□□□ 0.52
CNKSR1-207ENST00000482227 RNF20Q5VTR2 975 aa18.26■□□□□ 0.51
CNKSR1-207ENST00000482227 E4F1Q66K89 784 aaPredicted RBP18.26■□□□□ 0.51
CNKSR1-207ENST00000482227 PLA2G4AP47712 749 aa18.26■□□□□ 0.51
CNKSR1-207ENST00000482227 STX1AQ16623 288 aa18.26■□□□□ 0.51
CNKSR1-207ENST00000482227 ECHDC1Q9NTX5 307 aa18.26■□□□□ 0.51
CNKSR1-207ENST00000482227 KDRP35968 1356 aa18.26■□□□□ 0.51
CNKSR1-207ENST00000482227 JAK2O60674 1132 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 PSMA5P28066 241 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 STK3Q13188 491 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 METP08581 1390 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 KIF2AO00139 706 aaPredicted RBP18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 SOX12O15370 315 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 PNMA6AP0CW24 399 aaPredicted RBP18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 RPS6KB1P23443 525 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 NBPF11Q86T75 865 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 DDX11Q96FC9 970 aa18.25■□□□□ 0.51
CNKSR1-207ENST00000482227 BLOC1S2Q6QNY1 142 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms