RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ALDH1B1P30837 517 aa15.35■□□□□ 0.05
HMGN1-213ENST00000482192 CCDC30Q5VVM6 783 aa15.35■□□□□ 0.05
HMGN1-213ENST00000482192 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
HMGN1-213ENST00000482192 WDR63Q8IWG1 891 aa15.35■□□□□ 0.05
HMGN1-213ENST00000482192 ZC3H4Q9UPT8 1303 aaKnown RBP15.35■□□□□ 0.05
HMGN1-213ENST00000482192 C1QTNF8P60827 252 aa15.34■□□□□ 0.05
HMGN1-213ENST00000482192 RPGRQ92834 1020 aaKnown RBP15.34■□□□□ 0.05
HMGN1-213ENST00000482192 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-213ENST00000482192 LTBP3Q9NS15 1303 aa15.34■□□□□ 0.05
HMGN1-213ENST00000482192 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
HMGN1-213ENST00000482192 CCDC93Q567U6 631 aa15.33■□□□□ 0.04
HMGN1-213ENST00000482192 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.04
HMGN1-213ENST00000482192 TSPYL6Q8N831 410 aa15.33■□□□□ 0.04
HMGN1-213ENST00000482192 C7orf43Q8WVR3 580 aa15.33■□□□□ 0.04
HMGN1-213ENST00000482192 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
HMGN1-213ENST00000482192 SLX4Q8IY92 1834 aa15.32■□□□□ 0.04
HMGN1-213ENST00000482192 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-213ENST00000482192 PRELPP51888 382 aa15.32■□□□□ 0.04
HMGN1-213ENST00000482192 TWISTNBQ3B726 338 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-213ENST00000482192 RIC3Q7Z5B4 369 aa15.32■□□□□ 0.04
HMGN1-213ENST00000482192 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
HMGN1-213ENST00000482192 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
HMGN1-213ENST00000482192 TRMT112Q9UI30 125 aaKnown RBP15.32■□□□□ 0.04
HMGN1-213ENST00000482192 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
HMGN1-213ENST00000482192 SH3TC1Q8TE82 1336 aa15.32■□□□□ 0.04
HMGN1-213ENST00000482192 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
HMGN1-213ENST00000482192 RBM17Q96I25 401 aaKnown RBP15.31■□□□□ 0.04
HMGN1-213ENST00000482192 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
HMGN1-213ENST00000482192 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
HMGN1-213ENST00000482192 SBF1O95248 1867 aa15.31■□□□□ 0.04
HMGN1-213ENST00000482192 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
HMGN1-213ENST00000482192 DDX58O95786 925 aaKnown RBP15.3■□□□□ 0.04
HMGN1-213ENST00000482192 FER1L6Q2WGJ9 1857 aa15.3■□□□□ 0.04
HMGN1-213ENST00000482192 C3orf67Q6ZVT6 689 aa15.3■□□□□ 0.04
HMGN1-213ENST00000482192 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
HMGN1-213ENST00000482192 CRAMP1Q96RY5 1269 aa15.3■□□□□ 0.04
HMGN1-213ENST00000482192 TIAM2Q8IVF5 1701 aa15.29■□□□□ 0.04
HMGN1-213ENST00000482192 ATP5J2-PTCD1G3V325 749 aa15.29■□□□□ 0.04
HMGN1-213ENST00000482192 KIF3CO14782 793 aa15.29■□□□□ 0.04
HMGN1-213ENST00000482192 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
HMGN1-213ENST00000482192 PIAS4Q8N2W9 510 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-213ENST00000482192 HCLS1P14317 486 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-213ENST00000482192 FKBP4Q02790 459 aaKnown RBP eCLIP15.28■□□□□ 0.04
HMGN1-213ENST00000482192 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
HMGN1-213ENST00000482192 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
HMGN1-213ENST00000482192 NMRK2Q9NPI5 230 aa15.28■□□□□ 0.04
HMGN1-213ENST00000482192 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-213ENST00000482192 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.04
HMGN1-213ENST00000482192 OLFM4Q6UX06 510 aa15.27■□□□□ 0.04
HMGN1-213ENST00000482192 SYNE4Q8N205 404 aa15.27■□□□□ 0.04
HMGN1-213ENST00000482192 GLTPD2A6NH11 291 aa15.26■□□□□ 0.03
HMGN1-213ENST00000482192 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
HMGN1-213ENST00000482192 TCERG1O14776 1098 aaKnown RBP15.26■□□□□ 0.03
HMGN1-213ENST00000482192 ZNF428Q96B54 188 aa15.26■□□□□ 0.03
HMGN1-213ENST00000482192 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
HMGN1-213ENST00000482192 MYD88Q99836 296 aa15.26■□□□□ 0.03
HMGN1-213ENST00000482192 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
HMGN1-213ENST00000482192 ABCC4O15439 1325 aa15.25■□□□□ 0.03
HMGN1-213ENST00000482192 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
HMGN1-213ENST00000482192 EXOSC9Q06265 439 aaKnown RBP15.25■□□□□ 0.03
HMGN1-213ENST00000482192 DPY19L2Q6NUT2 758 aa15.25■□□□□ 0.03
HMGN1-213ENST00000482192 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
HMGN1-213ENST00000482192 CCDC191Q8NCU4 936 aa15.25■□□□□ 0.03
HMGN1-213ENST00000482192 PSMD1Q99460 953 aa15.25■□□□□ 0.03
HMGN1-213ENST00000482192 METTL22Q9BUU2 404 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-213ENST00000482192 TMX4Q9H1E5 349 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-213ENST00000482192 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-213ENST00000482192 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
HMGN1-213ENST00000482192 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
HMGN1-213ENST00000482192 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
HMGN1-213ENST00000482192 VAMP4O75379 141 aa15.24■□□□□ 0.03
HMGN1-213ENST00000482192 TOMM70O94826 608 aa15.24■□□□□ 0.03
HMGN1-213ENST00000482192 HSP90B1P14625 803 aaKnown RBP15.24■□□□□ 0.03
HMGN1-213ENST00000482192 DDX46Q7L014 1031 aaKnown RBP15.24■□□□□ 0.03
HMGN1-213ENST00000482192 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
HMGN1-213ENST00000482192 ZBTB38Q8NAP3 1195 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-213ENST00000482192 ZNF277Q9NRM2 450 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-213ENST00000482192 CWC25Q9NXE8 425 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-213ENST00000482192 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
HMGN1-213ENST00000482192 LAMB2P55268 1798 aa15.24■□□□□ 0.03
HMGN1-213ENST00000482192 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
HMGN1-213ENST00000482192 IRS4O14654 1257 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-213ENST00000482192 BBOX1O75936 387 aa15.23■□□□□ 0.03
HMGN1-213ENST00000482192 NEXNQ0ZGT2 675 aa15.23■□□□□ 0.03
HMGN1-213ENST00000482192 RTL5Q5HYW3 569 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-213ENST00000482192 C16orf71Q8IYS4 520 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-213ENST00000482192 RRAGCQ9HB90 399 aa15.23■□□□□ 0.03
HMGN1-213ENST00000482192 DICER1Q9UPY3 1922 aaKnown RBP15.22■□□□□ 0.03
HMGN1-213ENST00000482192 IARSP41252 1262 aaKnown RBP15.22■□□□□ 0.03
HMGN1-213ENST00000482192 FLIIQ13045 1269 aa15.22■□□□□ 0.03
HMGN1-213ENST00000482192 GRAPQ13588 217 aa15.22■□□□□ 0.03
HMGN1-213ENST00000482192 SF3B3Q15393 1217 aaKnown RBP15.22■□□□□ 0.03
HMGN1-213ENST00000482192 G2E3Q7L622 706 aa15.22■□□□□ 0.03
HMGN1-213ENST00000482192 GRAPLQ8TC17 118 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-213ENST00000482192 CCDC88AQ3V6T2 1871 aa15.21■□□□□ 0.03
HMGN1-213ENST00000482192 PCCAP05165 728 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-213ENST00000482192 VEGFAP15692 232 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-213ENST00000482192 TMC4Q7Z404 712 aa15.21■□□□□ 0.03
HMGN1-213ENST00000482192 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-213ENST00000482192 SP8Q8IXZ3 490 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms