RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 LARGE2Q8N3Y3 721 aa17.25■□□□□ 0.35
TSPAN1-207ENST00000482143 PSMD1Q99460 953 aa17.25■□□□□ 0.35
TSPAN1-207ENST00000482143 TLL2Q9Y6L7 1015 aa17.25■□□□□ 0.35
TSPAN1-207ENST00000482143 KLRG2A4D1S0 409 aaPredicted RBP17.24■□□□□ 0.35
TSPAN1-207ENST00000482143 EPS15P42566 896 aa17.24■□□□□ 0.35
TSPAN1-207ENST00000482143 DGKZQ13574 1117 aa17.24■□□□□ 0.35
TSPAN1-207ENST00000482143 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
TSPAN1-207ENST00000482143 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
TSPAN1-207ENST00000482143 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
TSPAN1-207ENST00000482143 CST9Q5W186 159 aa17.23■□□□□ 0.35
TSPAN1-207ENST00000482143 CC2D2BQ6DHV5 1058 aa17.23■□□□□ 0.35
TSPAN1-207ENST00000482143 RPGRQ92834 1020 aaKnown RBP17.23■□□□□ 0.35
TSPAN1-207ENST00000482143 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
TSPAN1-207ENST00000482143 KCNQ3O43525 872 aa17.22■□□□□ 0.35
TSPAN1-207ENST00000482143 SCNN1DP51172 638 aa17.22■□□□□ 0.35
TSPAN1-207ENST00000482143 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
TSPAN1-207ENST00000482143 COL4A5P29400 1685 aa17.22■□□□□ 0.35
TSPAN1-207ENST00000482143 NUP98P52948 1817 aa17.21■□□□□ 0.35
TSPAN1-207ENST00000482143 CELF2O95319 508 aaKnown RBP17.21■□□□□ 0.35
TSPAN1-207ENST00000482143 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
TSPAN1-207ENST00000482143 NYXQ9GZU5 481 aa17.21■□□□□ 0.35
TSPAN1-207ENST00000482143 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
TSPAN1-207ENST00000482143 ZNF408Q9H9D4 720 aa17.21■□□□□ 0.35
TSPAN1-207ENST00000482143 TCERG1O14776 1098 aaKnown RBP17.2■□□□□ 0.34
TSPAN1-207ENST00000482143 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
TSPAN1-207ENST00000482143 BRPF1P55201 1214 aaPredicted RBP17.2■□□□□ 0.34
TSPAN1-207ENST00000482143 TNRC18O15417 2968 aaPredicted RBP17.2■□□□□ 0.34
TSPAN1-207ENST00000482143 KDM3BQ7LBC6 1761 aa17.2■□□□□ 0.34
TSPAN1-207ENST00000482143 PDE4DIPQ5VU43 2346 aa17.19■□□□□ 0.34
TSPAN1-207ENST00000482143 PRAMEF22A3QJZ6 481 aa17.19■□□□□ 0.34
TSPAN1-207ENST00000482143 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
TSPAN1-207ENST00000482143 SAPCD2Q86UD0 394 aa17.19■□□□□ 0.34
TSPAN1-207ENST00000482143 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
TSPAN1-207ENST00000482143 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
TSPAN1-207ENST00000482143 CIAPIN1Q6FI81 312 aa17.18■□□□□ 0.34
TSPAN1-207ENST00000482143 NUTM1Q86Y26 1132 aa17.18■□□□□ 0.34
TSPAN1-207ENST00000482143 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
TSPAN1-207ENST00000482143 RGL2O15211 777 aa17.17■□□□□ 0.34
TSPAN1-207ENST00000482143 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
TSPAN1-207ENST00000482143 HLFQ16534 295 aa17.17■□□□□ 0.34
TSPAN1-207ENST00000482143 SNED1Q8TER0 1413 aa17.17■□□□□ 0.34
TSPAN1-207ENST00000482143 ABCC12Q96J65 1359 aa17.16■□□□□ 0.34
TSPAN1-207ENST00000482143 AKAP11Q9UKA4 1901 aa17.16■□□□□ 0.34
TSPAN1-207ENST00000482143 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
TSPAN1-207ENST00000482143 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
TSPAN1-207ENST00000482143 RBM17Q96I25 401 aaKnown RBP17.16■□□□□ 0.34
TSPAN1-207ENST00000482143 HHIPL1Q96JK4 782 aa17.16■□□□□ 0.34
TSPAN1-207ENST00000482143 GLIS2Q9BZE0 524 aaPredicted RBP17.16■□□□□ 0.34
TSPAN1-207ENST00000482143 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
TSPAN1-207ENST00000482143 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
TSPAN1-207ENST00000482143 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
TSPAN1-207ENST00000482143 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
TSPAN1-207ENST00000482143 NBPF26B4DH59 902 aa17.14■□□□□ 0.33
TSPAN1-207ENST00000482143 NOGQ13253 232 aa17.14■□□□□ 0.33
TSPAN1-207ENST00000482143 AOC3Q16853 763 aa17.14■□□□□ 0.33
TSPAN1-207ENST00000482143 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
TSPAN1-207ENST00000482143 NBPF15Q8N660 670 aa17.14■□□□□ 0.33
TSPAN1-207ENST00000482143 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
TSPAN1-207ENST00000482143 SOX10P56693 466 aa17.13■□□□□ 0.33
TSPAN1-207ENST00000482143 KIF6Q6ZMV9 814 aa17.13■□□□□ 0.33
TSPAN1-207ENST00000482143 HTATSF1O43719 755 aaKnown RBP17.12■□□□□ 0.33
TSPAN1-207ENST00000482143 GPTP24298 496 aa17.12■□□□□ 0.33
TSPAN1-207ENST00000482143 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
TSPAN1-207ENST00000482143 MCM10Q7L590 875 aa17.12■□□□□ 0.33
TSPAN1-207ENST00000482143 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
TSPAN1-207ENST00000482143 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
TSPAN1-207ENST00000482143 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
TSPAN1-207ENST00000482143 HUNKP57058 714 aa17.11■□□□□ 0.33
TSPAN1-207ENST00000482143 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
TSPAN1-207ENST00000482143 SUPT20HQ8NEM7 779 aa17.11■□□□□ 0.33
TSPAN1-207ENST00000482143 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
TSPAN1-207ENST00000482143 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
TSPAN1-207ENST00000482143 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
TSPAN1-207ENST00000482143 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
TSPAN1-207ENST00000482143 CXCL9Q07325 125 aa17.1■□□□□ 0.33
TSPAN1-207ENST00000482143 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
TSPAN1-207ENST00000482143 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
TSPAN1-207ENST00000482143 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
TSPAN1-207ENST00000482143 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
TSPAN1-207ENST00000482143 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.32
TSPAN1-207ENST00000482143 MAP3K15Q6ZN16 1313 aa17.08■□□□□ 0.32
TSPAN1-207ENST00000482143 TNIP1Q15025 636 aa17.08■□□□□ 0.32
TSPAN1-207ENST00000482143 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
TSPAN1-207ENST00000482143 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
TSPAN1-207ENST00000482143 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.32
TSPAN1-207ENST00000482143 RRP7AQ9Y3A4 280 aaKnown RBP17.08■□□□□ 0.32
TSPAN1-207ENST00000482143 POLR2AP24928 1970 aaKnown RBP17.08■□□□□ 0.32
TSPAN1-207ENST00000482143 LAMB2P55268 1798 aa17.07■□□□□ 0.32
TSPAN1-207ENST00000482143 RAD17O75943 681 aa17.07■□□□□ 0.32
TSPAN1-207ENST00000482143 MYL6BP14649 208 aa17.07■□□□□ 0.32
TSPAN1-207ENST00000482143 PRPF38BQ5VTL8 546 aaKnown RBP17.07■□□□□ 0.32
TSPAN1-207ENST00000482143 DPP8Q6V1X1 898 aaPredicted RBP17.07■□□□□ 0.32
TSPAN1-207ENST00000482143 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
TSPAN1-207ENST00000482143 ZIC5Q96T25 663 aa17.07■□□□□ 0.32
TSPAN1-207ENST00000482143 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
TSPAN1-207ENST00000482143 H7C1D1 291 aa17.06■□□□□ 0.32
TSPAN1-207ENST00000482143 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
TSPAN1-207ENST00000482143 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
TSPAN1-207ENST00000482143 PPP1R42Q7Z4L9 355 aa17.06■□□□□ 0.32
TSPAN1-207ENST00000482143 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms