RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 COL22A1Q8NFW1 1626 aaPredicted RBP8.32□□□□□ -1.08
NCK1-208ENST00000482071 RGPD2P0DJD1 1756 aa8.31□□□□□ -1.08
NCK1-208ENST00000482071 TMPOP42166 694 aaKnown RBP8.31□□□□□ -1.08
NCK1-208ENST00000482071 RETREG3Q86VR2 466 aa8.31□□□□□ -1.08
NCK1-208ENST00000482071 CCDC146Q8IYE0 955 aa8.31□□□□□ -1.08
NCK1-208ENST00000482071 CCDC24Q8N4L8 307 aa8.31□□□□□ -1.08
NCK1-208ENST00000482071 PLEKHG2Q9H7P9 1386 aa8.31□□□□□ -1.08
NCK1-208ENST00000482071 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
NCK1-208ENST00000482071 IL16Q14005 1332 aa8.3□□□□□ -1.08
NCK1-208ENST00000482071 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
NCK1-208ENST00000482071 PCDHGC3Q9UN70 934 aa8.3□□□□□ -1.08
NCK1-208ENST00000482071 ROBO1Q9Y6N7 1651 aa8.3□□□□□ -1.08
NCK1-208ENST00000482071 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
NCK1-208ENST00000482071 NUTM1Q86Y26 1132 aa8.29□□□□□ -1.08
NCK1-208ENST00000482071 PHACTR3Q96KR7 559 aa8.29□□□□□ -1.08
NCK1-208ENST00000482071 ATP13A2Q9NQ11 1180 aa8.29□□□□□ -1.08
NCK1-208ENST00000482071 E9PSI1 815 aa8.28□□□□□ -1.08
NCK1-208ENST00000482071 PRKAR2BP31323 418 aa8.28□□□□□ -1.08
NCK1-208ENST00000482071 NFE2L2Q16236 605 aa8.28□□□□□ -1.08
NCK1-208ENST00000482071 DDX17Q92841 729 aaKnown RBP8.28□□□□□ -1.08
NCK1-208ENST00000482071 HPS1Q92902 700 aa8.28□□□□□ -1.08
NCK1-208ENST00000482071 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
NCK1-208ENST00000482071 ADAMTS7Q9UKP4 1686 aa8.27□□□□□ -1.08
NCK1-208ENST00000482071 PPM1GO15355 546 aaPredicted RBP8.27□□□□□ -1.09
NCK1-208ENST00000482071 ZNF853P0CG23 659 aa8.27□□□□□ -1.09
NCK1-208ENST00000482071 FDX1P10109 184 aa8.27□□□□□ -1.09
NCK1-208ENST00000482071 AMPHP49418 695 aa8.27□□□□□ -1.09
NCK1-208ENST00000482071 XPCQ01831 940 aaPredicted RBP8.27□□□□□ -1.09
NCK1-208ENST00000482071 NUTM2GQ5VZR2 741 aa8.27□□□□□ -1.09
NCK1-208ENST00000482071 ERICH6BQ5W0A0 696 aa8.27□□□□□ -1.09
NCK1-208ENST00000482071 GTF3C3Q9Y5Q9 886 aa8.27□□□□□ -1.09
NCK1-208ENST00000482071 COL16A1Q07092 1604 aaPredicted RBP8.27□□□□□ -1.09
NCK1-208ENST00000482071 LRRC37A3O60309 1634 aa8.26□□□□□ -1.09
NCK1-208ENST00000482071 HTATSF1O43719 755 aaKnown RBP8.26□□□□□ -1.09
NCK1-208ENST00000482071 SSTR3P32745 418 aaPredicted RBP8.26□□□□□ -1.09
NCK1-208ENST00000482071 NFX1Q12986 1120 aaKnown RBP8.26□□□□□ -1.09
NCK1-208ENST00000482071 AMHR2Q16671 573 aa8.26□□□□□ -1.09
NCK1-208ENST00000482071 SULT6B1Q6IMI4 303 aa8.26□□□□□ -1.09
NCK1-208ENST00000482071 PTCRAQ6ISU1 281 aaPredicted RBP8.26□□□□□ -1.09
NCK1-208ENST00000482071 AEBP1Q8IUX7 1158 aa8.26□□□□□ -1.09
NCK1-208ENST00000482071 KRI1Q8N9T8 703 aaKnown RBP8.26□□□□□ -1.09
NCK1-208ENST00000482071 TRIM47Q96LD4 638 aa8.26□□□□□ -1.09
NCK1-208ENST00000482071 SUPT16HQ9Y5B9 1047 aaKnown RBP8.26□□□□□ -1.09
NCK1-208ENST00000482071 VIRMAQ69YN4 1812 aaKnown RBP8.25□□□□□ -1.09
NCK1-208ENST00000482071 SIAH2O43255 324 aa8.25□□□□□ -1.09
NCK1-208ENST00000482071 HMOX1P09601 288 aa8.25□□□□□ -1.09
NCK1-208ENST00000482071 RIPK4P57078 832 aa8.25□□□□□ -1.09
NCK1-208ENST00000482071 BARGINQ6ZT62 677 aa8.25□□□□□ -1.09
NCK1-208ENST00000482071 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
NCK1-208ENST00000482071 MAPK8IP3Q9UPT6 1336 aa8.25□□□□□ -1.09
NCK1-208ENST00000482071 ZMYND10O75800 440 aa8.24□□□□□ -1.09
NCK1-208ENST00000482071 WFS1O76024 890 aa8.24□□□□□ -1.09
NCK1-208ENST00000482071 CT47B1P0C2W7 299 aaPredicted RBP8.24□□□□□ -1.09
NCK1-208ENST00000482071 SNRPBP14678 240 aaKnown RBP8.24□□□□□ -1.09
NCK1-208ENST00000482071 NBPF6Q5VWK0 638 aa8.24□□□□□ -1.09
NCK1-208ENST00000482071 LRRC59Q96AG4 307 aaKnown RBP8.24□□□□□ -1.09
NCK1-208ENST00000482071 NBPF4Q96M43 638 aa8.24□□□□□ -1.09
NCK1-208ENST00000482071 RCAN3Q9UKA8 241 aa8.24□□□□□ -1.09
NCK1-208ENST00000482071 PHLPP1O60346 1717 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 PKD1L3Q7Z443 1732 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 CRB1P82279 1406 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 SENP3-EIF4A1A0A087X0R7 540 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 C6orf229H3BNL8 230 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 CCNYL3P0C7X3 344 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 MS4A1P11836 297 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 PTPRNQ16849 979 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 SENP2Q9HC62 589 aa8.23□□□□□ -1.09
NCK1-208ENST00000482071 RRP7AQ9Y3A4 280 aaKnown RBP8.23□□□□□ -1.09
NCK1-208ENST00000482071 SIPA1L3O60292 1781 aaPredicted RBP8.22□□□□□ -1.09
NCK1-208ENST00000482071 COL14A1Q05707 1796 aaKnown RBP8.22□□□□□ -1.09
NCK1-208ENST00000482071 MOXD2PA6NHM9 499 aa8.22□□□□□ -1.09
NCK1-208ENST00000482071 ALDH1A1P00352 501 aa8.22□□□□□ -1.09
NCK1-208ENST00000482071 BRPF1P55201 1214 aaPredicted RBP8.22□□□□□ -1.09
NCK1-208ENST00000482071 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
NCK1-208ENST00000482071 MTHFSDQ2M296 383 aaKnown RBP8.22□□□□□ -1.09
NCK1-208ENST00000482071 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
NCK1-208ENST00000482071 ANKRD24Q8TF21 1146 aa8.22□□□□□ -1.09
NCK1-208ENST00000482071 KIAA0232Q92628 1395 aa8.22□□□□□ -1.09
NCK1-208ENST00000482071 OVOS2A0A0G2JMS6 1433 aa8.21□□□□□ -1.09
NCK1-208ENST00000482071 CHL1O00533 1208 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 TOM1O60784 492 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 NEFMP07197 916 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 NDUFV2P19404 249 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 SH3BP2P78314 561 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 CALD1Q05682 793 aaKnown RBP8.21□□□□□ -1.1
NCK1-208ENST00000482071 NEUROD2Q15784 382 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 GAS2L2Q8NHY3 880 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 CABLES1Q8TDN4 633 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 MYH16Q9H6N6 1097 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 IFT57Q9NWB7 429 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 BABAM1Q9NWV8 329 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 CEMIPQ8WUJ3 1361 aa8.21□□□□□ -1.1
NCK1-208ENST00000482071 COL5A2P05997 1499 aaPredicted RBP8.2□□□□□ -1.1
NCK1-208ENST00000482071 SCN11AQ9UI33 1791 aa8.2□□□□□ -1.1
NCK1-208ENST00000482071 WIPF1O43516 503 aa8.2□□□□□ -1.1
NCK1-208ENST00000482071 RRP1P56182 461 aaKnown RBP8.2□□□□□ -1.1
NCK1-208ENST00000482071 ZC3H6P61129 1189 aaKnown RBP8.2□□□□□ -1.1
NCK1-208ENST00000482071 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
NCK1-208ENST00000482071 AMOTQ4VCS5 1084 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms