RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 INTS5Q6P9B9 1019 aaKnown RBP19.3■□□□□ 0.68
RXRA-202ENST00000481739 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
RXRA-202ENST00000481739 USP42Q9H9J4 1324 aaKnown RBP19.29■□□□□ 0.68
RXRA-202ENST00000481739 AFDNP55196 1824 aaKnown RBP19.29■□□□□ 0.68
RXRA-202ENST00000481739 ERC2O15083 957 aa19.29■□□□□ 0.68
RXRA-202ENST00000481739 EPB41L2O43491 1005 aaKnown RBP19.29■□□□□ 0.68
RXRA-202ENST00000481739 TRIM37O94972 964 aa19.29■□□□□ 0.68
RXRA-202ENST00000481739 CCNL1Q9UK58 526 aaPredicted RBP19.29■□□□□ 0.68
RXRA-202ENST00000481739 NUP188Q5SRE5 1749 aa19.28■□□□□ 0.68
RXRA-202ENST00000481739 TTC41PQ6P2S7 1318 aa19.28■□□□□ 0.68
RXRA-202ENST00000481739 TUBGCP6Q96RT7 1819 aa19.28■□□□□ 0.68
RXRA-202ENST00000481739 CICQ96RK0 1608 aaPredicted RBP19.28■□□□□ 0.68
RXRA-202ENST00000481739 OS9Q13438 667 aaPredicted RBP19.28■□□□□ 0.68
RXRA-202ENST00000481739 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
RXRA-202ENST00000481739 LINC00116Q8NCU8 138 aa19.28■□□□□ 0.68
RXRA-202ENST00000481739 SUCLG2Q96I99 432 aa19.28■□□□□ 0.68
RXRA-202ENST00000481739 ZNF831Q5JPB2 1677 aa19.27■□□□□ 0.68
RXRA-202ENST00000481739 USP26Q9BXU7 913 aa19.27■□□□□ 0.68
RXRA-202ENST00000481739 BCL11AQ9H165 835 aa19.27■□□□□ 0.68
RXRA-202ENST00000481739 COL5A3P25940 1745 aaPredicted RBP19.27■□□□□ 0.67
RXRA-202ENST00000481739 RABEP1Q15276 862 aa19.26■□□□□ 0.67
RXRA-202ENST00000481739 DZIP3Q86Y13 1208 aaKnown RBP19.26■□□□□ 0.67
RXRA-202ENST00000481739 GPATCH3Q96I76 525 aa19.26■□□□□ 0.67
RXRA-202ENST00000481739 KIF2CQ99661 725 aa19.26■□□□□ 0.67
RXRA-202ENST00000481739 TBC1D2BQ9UPU7 963 aa19.26■□□□□ 0.67
RXRA-202ENST00000481739 MAP3K15Q6ZN16 1313 aa19.26■□□□□ 0.67
RXRA-202ENST00000481739 MYH14Q7Z406 1995 aaKnown RBP19.26■□□□□ 0.67
RXRA-202ENST00000481739 EIF5P55010 431 aaKnown RBP19.25■□□□□ 0.67
RXRA-202ENST00000481739 IL27Q8NEV9 243 aa19.25■□□□□ 0.67
RXRA-202ENST00000481739 BICC1Q9H694 974 aaKnown RBP19.25■□□□□ 0.67
RXRA-202ENST00000481739 ANTXR1Q9H6X2 564 aa19.25■□□□□ 0.67
RXRA-202ENST00000481739 IL1RAPL2Q9NP60 686 aa19.25■□□□□ 0.67
RXRA-202ENST00000481739 KAZALD1Q96I82 304 aa19.25■□□□□ 0.67
RXRA-202ENST00000481739 LY75O60449 1722 aa19.24■□□□□ 0.67
RXRA-202ENST00000481739 EP400Q96L91 3159 aa19.24■□□□□ 0.67
RXRA-202ENST00000481739 GLRX3O76003 335 aaKnown RBP19.23■□□□□ 0.67
RXRA-202ENST00000481739 G3BP1Q13283 466 aaKnown RBP eCLIP19.23■□□□□ 0.673e-8■□□□□ 8
RXRA-202ENST00000481739 TCIRG1Q13488 830 aa19.23■□□□□ 0.67
RXRA-202ENST00000481739 NFKBIBQ15653 356 aa19.23■□□□□ 0.67
RXRA-202ENST00000481739 CWC25Q9NXE8 425 aaPredicted RBP19.23■□□□□ 0.67
RXRA-202ENST00000481739 RREB1Q92766 1687 aa19.23■□□□□ 0.67
RXRA-202ENST00000481739 A0A087WZG4 1122 aa19.23■□□□□ 0.67
RXRA-202ENST00000481739 TRIM6-TRIM34B2RNG4 842 aa19.23■□□□□ 0.67
RXRA-202ENST00000481739 HLFQ16534 295 aa19.23■□□□□ 0.67
RXRA-202ENST00000481739 RABL6Q3YEC7 729 aaPredicted RBP19.23■□□□□ 0.67
RXRA-202ENST00000481739 PI4K2BQ8TCG2 481 aa19.23■□□□□ 0.67
RXRA-202ENST00000481739 JARID2Q92833 1246 aaPredicted RBP19.23■□□□□ 0.67
RXRA-202ENST00000481739 GIGYF2Q6Y7W6 1299 aaKnown RBP19.22■□□□□ 0.67
RXRA-202ENST00000481739 CNTROBQ8N137 903 aa19.22■□□□□ 0.67
RXRA-202ENST00000481739 ESYT1Q9BSJ8 1104 aa19.22■□□□□ 0.67
RXRA-202ENST00000481739 CNTNAP4Q9C0A0 1308 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 CHMLP26374 656 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 HSP90AB3PQ58FF7 597 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 UBE3BQ7Z3V4 1068 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 CCDC191Q8NCU4 936 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 ERVV-1B6SEH8 477 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 MCCP23508 829 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 NUTM1Q86Y26 1132 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 RILPL2Q969X0 211 aa19.21■□□□□ 0.67
RXRA-202ENST00000481739 IFIT2P09913 472 aaKnown RBP19.2■□□□□ 0.66
RXRA-202ENST00000481739 RC3H1Q5TC82 1133 aaKnown RBP19.2■□□□□ 0.66
RXRA-202ENST00000481739 TSHZ3Q63HK5 1081 aa19.2■□□□□ 0.66
RXRA-202ENST00000481739 ISCA1Q9BUE6 129 aa19.2■□□□□ 0.66
RXRA-202ENST00000481739 SLKQ9H2G2 1235 aaPredicted RBP19.2■□□□□ 0.66
RXRA-202ENST00000481739 COPRSQ9NQ92 184 aa19.2■□□□□ 0.66
RXRA-202ENST00000481739 CHMP5Q9NZZ3 219 aa19.2■□□□□ 0.66
RXRA-202ENST00000481739 NUP98P52948 1817 aa19.2■□□□□ 0.66
RXRA-202ENST00000481739 TAF1LQ8IZX4 1826 aa19.19■□□□□ 0.66
RXRA-202ENST00000481739 K7ELQ4 463 aaPredicted RBP19.19■□□□□ 0.66
RXRA-202ENST00000481739 GNPATO15228 680 aa19.19■□□□□ 0.66
RXRA-202ENST00000481739 GPTP24298 496 aa19.19■□□□□ 0.66
RXRA-202ENST00000481739 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
RXRA-202ENST00000481739 CIZ1Q9ULV3 898 aaPredicted RBP19.19■□□□□ 0.66
RXRA-202ENST00000481739 ANAPC15P60006 121 aa19.18■□□□□ 0.66
RXRA-202ENST00000481739 APBA3O96018 575 aa19.18■□□□□ 0.66
RXRA-202ENST00000481739 H7C1W4 665 aa19.17■□□□□ 0.66
RXRA-202ENST00000481739 RPS6KA4O75676 772 aa19.17■□□□□ 0.66
RXRA-202ENST00000481739 CASP7P55210 303 aa19.17■□□□□ 0.66
RXRA-202ENST00000481739 AK7Q96M32 723 aa19.17■□□□□ 0.66
RXRA-202ENST00000481739 LRRC4BQ9NT99 713 aa19.17■□□□□ 0.66
RXRA-202ENST00000481739 PA2G4Q9UQ80 394 aaKnown RBP19.17■□□□□ 0.66
RXRA-202ENST00000481739 ANKRD36CQ5JPF3 1778 aa19.17■□□□□ 0.66
RXRA-202ENST00000481739 ST18O60284 1047 aa19.16■□□□□ 0.66
RXRA-202ENST00000481739 CAMTA2O94983 1202 aa19.16■□□□□ 0.66
RXRA-202ENST00000481739 TRIM28Q13263 835 aaKnown RBP19.16■□□□□ 0.66
RXRA-202ENST00000481739 SLC27A3Q5K4L6 730 aa19.16■□□□□ 0.66
RXRA-202ENST00000481739 SMIM5Q71RC9 77 aa19.16■□□□□ 0.66
RXRA-202ENST00000481739 IL17RAQ96F46 866 aa19.16■□□□□ 0.66
RXRA-202ENST00000481739 RTCBQ9Y3I0 505 aaKnown RBP19.16■□□□□ 0.66
RXRA-202ENST00000481739 C4BP0C0L5 1744 aa19.15■□□□□ 0.66
RXRA-202ENST00000481739 SASH1O94885 1247 aa19.15■□□□□ 0.66
RXRA-202ENST00000481739 AACSQ86V21 672 aa19.15■□□□□ 0.66
RXRA-202ENST00000481739 NLRP10Q86W26 655 aa19.15■□□□□ 0.66
RXRA-202ENST00000481739 TXNRD1Q16881 649 aa19.14■□□□□ 0.65
RXRA-202ENST00000481739 EPHA10Q5JZY3 1008 aa19.14■□□□□ 0.65
RXRA-202ENST00000481739 RUFY2Q8WXA3 655 aa19.14■□□□□ 0.65
RXRA-202ENST00000481739 ZNF652Q9Y2D9 606 aa19.14■□□□□ 0.65
RXRA-202ENST00000481739 HIP1O00291 1037 aa19.14■□□□□ 0.65
RXRA-202ENST00000481739 RFX5P48382 616 aaPredicted RBP19.14■□□□□ 0.65
RXRA-202ENST00000481739 EVI5LQ96CN4 794 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms