RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 CCDC88AQ3V6T2 1871 aa11.62□□□□□ -0.55
LINC00544-202ENST00000481738 ALDH1B1P30837 517 aa11.62□□□□□ -0.55
LINC00544-202ENST00000481738 C1QTNF8P60827 252 aa11.62□□□□□ -0.55
LINC00544-202ENST00000481738 CRY2Q49AN0 593 aa11.62□□□□□ -0.55
LINC00544-202ENST00000481738 CCDC30Q5VVM6 783 aa11.62□□□□□ -0.55
LINC00544-202ENST00000481738 RPGRQ92834 1020 aaKnown RBP11.62□□□□□ -0.55
LINC00544-202ENST00000481738 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
LINC00544-202ENST00000481738 PHAXQ9H814 394 aaKnown RBP11.62□□□□□ -0.55
LINC00544-202ENST00000481738 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
LINC00544-202ENST00000481738 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
LINC00544-202ENST00000481738 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
LINC00544-202ENST00000481738 SOGA3Q5TF21 947 aa11.61□□□□□ -0.55
LINC00544-202ENST00000481738 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
LINC00544-202ENST00000481738 C7orf43Q8WVR3 580 aa11.61□□□□□ -0.55
LINC00544-202ENST00000481738 TAOK3Q9H2K8 898 aa11.61□□□□□ -0.55
LINC00544-202ENST00000481738 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 ATP5J2-PTCD1G3V325 749 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 KIF3CO14782 793 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 TWISTNBQ3B726 338 aaPredicted RBP11.6□□□□□ -0.55
LINC00544-202ENST00000481738 CCDC93Q567U6 631 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 SLC10A5Q5PT55 438 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 WDR63Q8IWG1 891 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 SYNE4Q8N205 404 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 NLRP3Q96P20 1036 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 ISCA1Q9BUE6 129 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 NMRK2Q9NPI5 230 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
LINC00544-202ENST00000481738 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 FANCIQ9NVI1 1328 aa11.6□□□□□ -0.55
LINC00544-202ENST00000481738 HCLS1P14317 486 aaPredicted RBP11.59□□□□□ -0.55
LINC00544-202ENST00000481738 HOXA10P31260 410 aaPredicted RBP11.59□□□□□ -0.55
LINC00544-202ENST00000481738 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
LINC00544-202ENST00000481738 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
LINC00544-202ENST00000481738 KDM2BQ8NHM5 1336 aa11.59□□□□□ -0.55
LINC00544-202ENST00000481738 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
LINC00544-202ENST00000481738 UTRNP46939 3433 aa11.58□□□□□ -0.56
LINC00544-202ENST00000481738 CRAMP1Q96RY5 1269 aa11.58□□□□□ -0.56
LINC00544-202ENST00000481738 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
LINC00544-202ENST00000481738 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
LINC00544-202ENST00000481738 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
LINC00544-202ENST00000481738 LAMB2P55268 1798 aa11.57□□□□□ -0.56
LINC00544-202ENST00000481738 DICER1Q9UPY3 1922 aaKnown RBP11.57□□□□□ -0.56
LINC00544-202ENST00000481738 DDX58O95786 925 aaKnown RBP11.57□□□□□ -0.56
LINC00544-202ENST00000481738 FKBP4Q02790 459 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC00544-202ENST00000481738 EXOSC9Q06265 439 aaKnown RBP11.57□□□□□ -0.56
LINC00544-202ENST00000481738 RTKN2Q8IZC4 609 aa11.57□□□□□ -0.56
LINC00544-202ENST00000481738 FAM89AQ96GI7 184 aa11.57□□□□□ -0.56
LINC00544-202ENST00000481738 MYD88Q99836 296 aa11.57□□□□□ -0.56
LINC00544-202ENST00000481738 RRAGCQ9HB90 399 aa11.57□□□□□ -0.56
LINC00544-202ENST00000481738 GLTPD2A6NH11 291 aa11.56□□□□□ -0.56
LINC00544-202ENST00000481738 PPEF1O14829 653 aaPredicted RBP11.56□□□□□ -0.56
LINC00544-202ENST00000481738 TRIM28Q13263 835 aaKnown RBP11.56□□□□□ -0.56
LINC00544-202ENST00000481738 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
LINC00544-202ENST00000481738 SLC51AQ86UW1 340 aa11.56□□□□□ -0.56
LINC00544-202ENST00000481738 METTL22Q9BUU2 404 aaPredicted RBP11.56□□□□□ -0.56
LINC00544-202ENST00000481738 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
LINC00544-202ENST00000481738 ZNF277Q9NRM2 450 aaPredicted RBP11.56□□□□□ -0.56
LINC00544-202ENST00000481738 MAP3K2Q9Y2U5 619 aa11.56□□□□□ -0.56
LINC00544-202ENST00000481738 ABCC4O15439 1325 aa11.56□□□□□ -0.56
LINC00544-202ENST00000481738 DDX60Q8IY21 1712 aaKnown RBP11.55□□□□□ -0.56
LINC00544-202ENST00000481738 GOLGB1Q14789 3259 aaKnown RBP11.55□□□□□ -0.56
LINC00544-202ENST00000481738 VAMP4O75379 141 aa11.55□□□□□ -0.56
LINC00544-202ENST00000481738 SLC4A2P04920 1241 aa11.55□□□□□ -0.56
LINC00544-202ENST00000481738 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
LINC00544-202ENST00000481738 DPY19L2Q6NUT2 758 aa11.55□□□□□ -0.56
LINC00544-202ENST00000481738 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
LINC00544-202ENST00000481738 DDX46Q7L014 1031 aaKnown RBP11.55□□□□□ -0.56
LINC00544-202ENST00000481738 G2E3Q7L622 706 aa11.55□□□□□ -0.56
LINC00544-202ENST00000481738 SNED1Q8TER0 1413 aa11.54□□□□□ -0.56
LINC00544-202ENST00000481738 PI4KAP2A4QPH2 592 aa11.54□□□□□ -0.56
LINC00544-202ENST00000481738 CCER2I3L3R5 266 aa11.54□□□□□ -0.56
LINC00544-202ENST00000481738 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
LINC00544-202ENST00000481738 TOMM70O94826 608 aa11.54□□□□□ -0.56
LINC00544-202ENST00000481738 IARSP41252 1262 aaKnown RBP11.54□□□□□ -0.56
LINC00544-202ENST00000481738 C16orf71Q8IYS4 520 aaPredicted RBP11.54□□□□□ -0.56
LINC00544-202ENST00000481738 PI4KAP1Q8N8J0 262 aa11.54□□□□□ -0.56
LINC00544-202ENST00000481738 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
LINC00544-202ENST00000481738 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
LINC00544-202ENST00000481738 FLIIQ13045 1269 aa11.53□□□□□ -0.56
LINC00544-202ENST00000481738 GRAPQ13588 217 aa11.53□□□□□ -0.56
LINC00544-202ENST00000481738 ZBTB38Q8NAP3 1195 aaPredicted RBP11.53□□□□□ -0.56
LINC00544-202ENST00000481738 GRAPLQ8TC17 118 aaPredicted RBP11.53□□□□□ -0.56
LINC00544-202ENST00000481738 JARID2Q92833 1246 aaPredicted RBP11.53□□□□□ -0.56
LINC00544-202ENST00000481738 PSMD1Q99460 953 aa11.53□□□□□ -0.56
LINC00544-202ENST00000481738 TMX4Q9H1E5 349 aaPredicted RBP11.53□□□□□ -0.56
LINC00544-202ENST00000481738 CWC25Q9NXE8 425 aaPredicted RBP11.53□□□□□ -0.56
LINC00544-202ENST00000481738 ATP6V0A2Q9Y487 856 aa11.53□□□□□ -0.56
LINC00544-202ENST00000481738 BBOX1O75936 387 aa11.52□□□□□ -0.57
LINC00544-202ENST00000481738 DDNO94850 711 aaPredicted RBP11.52□□□□□ -0.57
LINC00544-202ENST00000481738 PCCAP05165 728 aaPredicted RBP11.52□□□□□ -0.57
LINC00544-202ENST00000481738 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
LINC00544-202ENST00000481738 NEXNQ0ZGT2 675 aa11.52□□□□□ -0.57
LINC00544-202ENST00000481738 SF3B3Q15393 1217 aaKnown RBP11.52□□□□□ -0.57
LINC00544-202ENST00000481738 GRIPAP1Q4V328 841 aa11.52□□□□□ -0.57
LINC00544-202ENST00000481738 SP8Q8IXZ3 490 aa11.52□□□□□ -0.57
LINC00544-202ENST00000481738 TAF1P21675 1872 aa11.52□□□□□ -0.57
LINC00544-202ENST00000481738 VEGFAP15692 232 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms