RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 NLRP10Q86W26 655 aa24.15■■□□□ 1.46
HSPG2-210ENST00000481644 ZNF526Q8TF50 670 aaPredicted RBP24.15■■□□□ 1.46
HSPG2-210ENST00000481644 PHAXQ9H814 394 aaKnown RBP24.15■■□□□ 1.46
HSPG2-210ENST00000481644 RNF181Q9P0P0 153 aa24.15■■□□□ 1.46
HSPG2-210ENST00000481644 GOLGA2Q08379 1002 aa24.14■■□□□ 1.45
HSPG2-210ENST00000481644 FER1L6Q2WGJ9 1857 aa24.14■■□□□ 1.45
HSPG2-210ENST00000481644 RNF123Q5XPI4 1314 aa24.13■■□□□ 1.45
HSPG2-210ENST00000481644 CCDC88AQ3V6T2 1871 aa24.13■■□□□ 1.45
HSPG2-210ENST00000481644 CRY2Q49AN0 593 aa24.13■■□□□ 1.45
HSPG2-210ENST00000481644 GPBP1L1Q9HC44 474 aaPredicted RBP24.13■■□□□ 1.45
HSPG2-210ENST00000481644 CCER2I3L3R5 266 aa24.12■■□□□ 1.45
HSPG2-210ENST00000481644 RIC3Q7Z5B4 369 aa24.12■■□□□ 1.45
HSPG2-210ENST00000481644 STK31Q9BXU1 1019 aa24.12■■□□□ 1.45
HSPG2-210ENST00000481644 NFKBIEO00221 500 aa24.11■■□□□ 1.45
HSPG2-210ENST00000481644 ALDH1B1P30837 517 aa24.11■■□□□ 1.45
HSPG2-210ENST00000481644 SOGA3Q5TF21 947 aa24.11■■□□□ 1.45
HSPG2-210ENST00000481644 RPGRQ92834 1020 aaKnown RBP24.11■■□□□ 1.45
HSPG2-210ENST00000481644 TRMT112Q9UI30 125 aaKnown RBP24.11■■□□□ 1.45
HSPG2-210ENST00000481644 ATP5J2-PTCD1G3V325 749 aa24.1■■□□□ 1.45
HSPG2-210ENST00000481644 LMNB1P20700 586 aa24.1■■□□□ 1.45
HSPG2-210ENST00000481644 ISCA1Q9BUE6 129 aa24.1■■□□□ 1.45
HSPG2-210ENST00000481644 LAMB2P55268 1798 aa24.09■■□□□ 1.45
HSPG2-210ENST00000481644 TCERG1O14776 1098 aaKnown RBP24.09■■□□□ 1.45
HSPG2-210ENST00000481644 DDX58O95786 925 aaKnown RBP24.09■■□□□ 1.45
HSPG2-210ENST00000481644 SLC10A5Q5PT55 438 aa24.09■■□□□ 1.45
HSPG2-210ENST00000481644 NLRP3Q96P20 1036 aa24.09■■□□□ 1.45
HSPG2-210ENST00000481644 MYH16Q9H6N6 1097 aa24.09■■□□□ 1.45
HSPG2-210ENST00000481644 SPINK5Q9NQ38 1064 aaPredicted RBP24.09■■□□□ 1.45
HSPG2-210ENST00000481644 SH3TC1Q8TE82 1336 aa24.09■■□□□ 1.45
HSPG2-210ENST00000481644 TIAM2Q8IVF5 1701 aa24.08■■□□□ 1.45
HSPG2-210ENST00000481644 EXOSC9Q06265 439 aaKnown RBP24.08■■□□□ 1.45
HSPG2-210ENST00000481644 C3orf67Q6ZVT6 689 aa24.08■■□□□ 1.45
HSPG2-210ENST00000481644 C7orf43Q8WVR3 580 aa24.08■■□□□ 1.45
HSPG2-210ENST00000481644 ZNF428Q96B54 188 aa24.08■■□□□ 1.45
HSPG2-210ENST00000481644 HOXA10P31260 410 aaPredicted RBP24.07■■□□□ 1.44
HSPG2-210ENST00000481644 PRELPP51888 382 aa24.07■■□□□ 1.44
HSPG2-210ENST00000481644 CCDC93Q567U6 631 aa24.07■■□□□ 1.44
HSPG2-210ENST00000481644 RBM17Q96I25 401 aaKnown RBP24.07■■□□□ 1.44
HSPG2-210ENST00000481644 TAOK3Q9H2K8 898 aa24.07■■□□□ 1.44
HSPG2-210ENST00000481644 CACNA1FO60840 1977 aa24.06■■□□□ 1.44
HSPG2-210ENST00000481644 HCLS1P14317 486 aaPredicted RBP24.06■■□□□ 1.44
HSPG2-210ENST00000481644 SYNE4Q8N205 404 aa24.06■■□□□ 1.44
HSPG2-210ENST00000481644 ZNF521Q96K83 1311 aa24.06■■□□□ 1.44
HSPG2-210ENST00000481644 LTBP3Q9NS15 1303 aa24.06■■□□□ 1.44
HSPG2-210ENST00000481644 DICER1Q9UPY3 1922 aaKnown RBP24.06■■□□□ 1.44
HSPG2-210ENST00000481644 DDX60Q8IY21 1712 aaKnown RBP24.05■■□□□ 1.44
HSPG2-210ENST00000481644 TRIM28Q13263 835 aaKnown RBP24.05■■□□□ 1.44
HSPG2-210ENST00000481644 MYD88Q99836 296 aa24.05■■□□□ 1.44
HSPG2-210ENST00000481644 VAMP4O75379 141 aa24.04■■□□□ 1.44
HSPG2-210ENST00000481644 SLC4A2P04920 1241 aa24.04■■□□□ 1.44
HSPG2-210ENST00000481644 CRAMP1Q96RY5 1269 aa24.04■■□□□ 1.44
HSPG2-210ENST00000481644 ZC3H4Q9UPT8 1303 aaKnown RBP24.04■■□□□ 1.44
HSPG2-210ENST00000481644 OLFM4Q6UX06 510 aa24.03■■□□□ 1.44
HSPG2-210ENST00000481644 FAM89AQ96GI7 184 aa24.03■■□□□ 1.44
HSPG2-210ENST00000481644 MAP3K2Q9Y2U5 619 aa24.03■■□□□ 1.44
HSPG2-210ENST00000481644 DIEXFQ68CQ4 756 aaKnown RBP24.02■■□□□ 1.44
HSPG2-210ENST00000481644 KSR2Q6VAB6 950 aa24.02■■□□□ 1.44
HSPG2-210ENST00000481644 RTKN2Q8IZC4 609 aa24.02■■□□□ 1.44
HSPG2-210ENST00000481644 METTL22Q9BUU2 404 aaPredicted RBP24.02■■□□□ 1.44
HSPG2-210ENST00000481644 PI4KAP2A4QPH2 592 aa24.01■■□□□ 1.43
HSPG2-210ENST00000481644 G2E3Q7L622 706 aa24.01■■□□□ 1.43
HSPG2-210ENST00000481644 PI4KAP1Q8N8J0 262 aa24.01■■□□□ 1.43
HSPG2-210ENST00000481644 PPEF1O14829 653 aaPredicted RBP24■■□□□ 1.43
HSPG2-210ENST00000481644 C1QTNF8P60827 252 aa24■■□□□ 1.43
HSPG2-210ENST00000481644 FKBP4Q02790 459 aaKnown RBP eCLIP24■■□□□ 1.43
HSPG2-210ENST00000481644 RTL5Q5HYW3 569 aaPredicted RBP24■■□□□ 1.43
HSPG2-210ENST00000481644 CCDC191Q8NCU4 936 aa24■■□□□ 1.43
HSPG2-210ENST00000481644 KDM2BQ8NHM5 1336 aa24■■□□□ 1.43
HSPG2-210ENST00000481644 CC2D2BQ6DHV5 1058 aa23.99■■□□□ 1.43
HSPG2-210ENST00000481644 ZBTB38Q8NAP3 1195 aaPredicted RBP23.99■■□□□ 1.43
HSPG2-210ENST00000481644 CWC25Q9NXE8 425 aaPredicted RBP23.99■■□□□ 1.43
HSPG2-210ENST00000481644 ABCC4O15439 1325 aa23.99■■□□□ 1.43
HSPG2-210ENST00000481644 FLIIQ13045 1269 aa23.98■■□□□ 1.43
HSPG2-210ENST00000481644 DDX46Q7L014 1031 aaKnown RBP23.98■■□□□ 1.43
HSPG2-210ENST00000481644 NMRK2Q9NPI5 230 aa23.98■■□□□ 1.43
HSPG2-210ENST00000481644 IRS4O14654 1257 aaPredicted RBP23.97■■□□□ 1.43
HSPG2-210ENST00000481644 KIF3CO14782 793 aa23.97■■□□□ 1.43
HSPG2-210ENST00000481644 NEXNQ0ZGT2 675 aa23.97■■□□□ 1.43
HSPG2-210ENST00000481644 SNED1Q8TER0 1413 aa23.97■■□□□ 1.43
HSPG2-210ENST00000481644 TAF1P21675 1872 aa23.96■■□□□ 1.43
HSPG2-210ENST00000481644 FKBP5Q13451 457 aaPredicted RBP23.96■■□□□ 1.43
HSPG2-210ENST00000481644 ZNF277Q9NRM2 450 aaPredicted RBP23.96■■□□□ 1.43
HSPG2-210ENST00000481644 E9PSI1 815 aa23.95■■□□□ 1.42
HSPG2-210ENST00000481644 PCCAP05165 728 aaPredicted RBP23.95■■□□□ 1.42
HSPG2-210ENST00000481644 GRIPAP1Q4V328 841 aa23.95■■□□□ 1.42
HSPG2-210ENST00000481644 TMX4Q9H1E5 349 aaPredicted RBP23.95■■□□□ 1.42
HSPG2-210ENST00000481644 GLTPD2A6NH11 291 aa23.94■■□□□ 1.42
HSPG2-210ENST00000481644 BBOX1O75936 387 aa23.94■■□□□ 1.42
HSPG2-210ENST00000481644 IGKV5-2P06315 115 aa23.94■■□□□ 1.42
HSPG2-210ENST00000481644 HSP90B1P14625 803 aaKnown RBP23.94■■□□□ 1.42
HSPG2-210ENST00000481644 GRAPQ13588 217 aa23.94■■□□□ 1.42
HSPG2-210ENST00000481644 SF3B3Q15393 1217 aaKnown RBP23.94■■□□□ 1.42
HSPG2-210ENST00000481644 MIER1Q8N108 512 aa23.94■■□□□ 1.42
HSPG2-210ENST00000481644 GRAPLQ8TC17 118 aaPredicted RBP23.94■■□□□ 1.42
HSPG2-210ENST00000481644 PSMD1Q99460 953 aa23.94■■□□□ 1.42
HSPG2-210ENST00000481644 ATP6V0A2Q9Y487 856 aa23.94■■□□□ 1.42
HSPG2-210ENST00000481644 SLC51AQ86UW1 340 aa23.93■■□□□ 1.42
HSPG2-210ENST00000481644 IARSP41252 1262 aaKnown RBP23.92■■□□□ 1.42
HSPG2-210ENST00000481644 DPY19L2Q6NUT2 758 aa23.92■■□□□ 1.42
HSPG2-210ENST00000481644 JARID2Q92833 1246 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms