RNA–Protein interactions for RNA: ENST00000481631.1

DHFR2-204, Transcript of dihydrofolate reductase 2, humanhuman

TSL 3

Gene DHFR2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-204ENST00000481631 PSEN2P49810 448 aa12.26□□□□□ -0.45
DHFR2-204ENST00000481631 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
DHFR2-204ENST00000481631 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
DHFR2-204ENST00000481631 CST9Q5W186 159 aa12.26□□□□□ -0.45
DHFR2-204ENST00000481631 NME9Q86XW9 330 aa12.26□□□□□ -0.45
DHFR2-204ENST00000481631 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
DHFR2-204ENST00000481631 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
DHFR2-204ENST00000481631 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
DHFR2-204ENST00000481631 CYP27B1O15528 508 aa12.25□□□□□ -0.45
DHFR2-204ENST00000481631 C21orf2O43822 256 aa12.25□□□□□ -0.45
DHFR2-204ENST00000481631 C2CD5Q86YS7 1000 aa12.25□□□□□ -0.45
DHFR2-204ENST00000481631 STAC3Q96MF2 364 aa12.25□□□□□ -0.45
DHFR2-204ENST00000481631 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
DHFR2-204ENST00000481631 USP42Q9H9J4 1324 aaKnown RBP12.25□□□□□ -0.45
DHFR2-204ENST00000481631 KDRP35968 1356 aa12.25□□□□□ -0.45
DHFR2-204ENST00000481631 NRXN2Q9P2S2 1712 aa12.25□□□□□ -0.45
DHFR2-204ENST00000481631 HRO43593 1189 aa12.24□□□□□ -0.45
DHFR2-204ENST00000481631 MFSD10Q14728 455 aa12.24□□□□□ -0.45
DHFR2-204ENST00000481631 MAP3K19Q56UN5 1328 aa12.24□□□□□ -0.45
DHFR2-204ENST00000481631 MYH14Q7Z406 1995 aaKnown RBP12.24□□□□□ -0.45
DHFR2-204ENST00000481631 SAPCD2Q86UD0 394 aa12.24□□□□□ -0.45
DHFR2-204ENST00000481631 HHIPL1Q96JK4 782 aa12.24□□□□□ -0.45
DHFR2-204ENST00000481631 SAGE1Q9NXZ1 904 aa12.24□□□□□ -0.45
DHFR2-204ENST00000481631 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
DHFR2-204ENST00000481631 INSRP06213 1382 aa12.23□□□□□ -0.45
DHFR2-204ENST00000481631 ZNF541Q9H0D2 1346 aa12.23□□□□□ -0.45
DHFR2-204ENST00000481631 H0YIN7 160 aa12.23□□□□□ -0.45
DHFR2-204ENST00000481631 NOGQ13253 232 aa12.23□□□□□ -0.45
DHFR2-204ENST00000481631 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
DHFR2-204ENST00000481631 DDX27Q96GQ7 796 aaKnown RBP12.23□□□□□ -0.45
DHFR2-204ENST00000481631 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
DHFR2-204ENST00000481631 TRAF5O00463 557 aa12.22□□□□□ -0.45
DHFR2-204ENST00000481631 TM4SF1P30408 202 aa12.22□□□□□ -0.45
DHFR2-204ENST00000481631 AKAP4Q5JQC9 854 aa12.22□□□□□ -0.45
DHFR2-204ENST00000481631 MPNDQ8N594 471 aa12.22□□□□□ -0.45
DHFR2-204ENST00000481631 COL6A3P12111 3177 aa12.22□□□□□ -0.45
DHFR2-204ENST00000481631 MKI67P46013 3256 aaKnown RBP12.22□□□□□ -0.45
DHFR2-204ENST00000481631 EVC2Q86UK5 1308 aa12.21□□□□□ -0.45
DHFR2-204ENST00000481631 HOXC9P31274 260 aa12.21□□□□□ -0.45
DHFR2-204ENST00000481631 PKN2Q16513 984 aaKnown RBP12.21□□□□□ -0.45
DHFR2-204ENST00000481631 AMER1Q5JTC6 1135 aaPredicted RBP12.21□□□□□ -0.45
DHFR2-204ENST00000481631 NBPF6Q5VWK0 638 aa12.21□□□□□ -0.45
DHFR2-204ENST00000481631 NBPF4Q96M43 638 aa12.21□□□□□ -0.45
DHFR2-204ENST00000481631 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
DHFR2-204ENST00000481631 AKAP11Q9UKA4 1901 aa12.2□□□□□ -0.46
DHFR2-204ENST00000481631 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
DHFR2-204ENST00000481631 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
DHFR2-204ENST00000481631 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
DHFR2-204ENST00000481631 FOSBP53539 338 aa12.19□□□□□ -0.46
DHFR2-204ENST00000481631 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
DHFR2-204ENST00000481631 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
DHFR2-204ENST00000481631 ZIC5Q96T25 663 aa12.19□□□□□ -0.46
DHFR2-204ENST00000481631 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
DHFR2-204ENST00000481631 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
DHFR2-204ENST00000481631 COL11A2P13942 1736 aaPredicted RBP12.18□□□□□ -0.46
DHFR2-204ENST00000481631 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
DHFR2-204ENST00000481631 AMPHP49418 695 aa12.18□□□□□ -0.46
DHFR2-204ENST00000481631 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
DHFR2-204ENST00000481631 CARMIL3Q8ND23 1372 aa12.18□□□□□ -0.46
DHFR2-204ENST00000481631 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
DHFR2-204ENST00000481631 TRPA1O75762 1119 aa12.17□□□□□ -0.46
DHFR2-204ENST00000481631 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
DHFR2-204ENST00000481631 EVI5O60447 810 aa12.16□□□□□ -0.46
DHFR2-204ENST00000481631 SOGA3Q5TF21 947 aa12.16□□□□□ -0.46
DHFR2-204ENST00000481631 COL25A1Q9BXS0 654 aaPredicted RBP12.16□□□□□ -0.46
DHFR2-204ENST00000481631 RNF186Q9NXI6 227 aa12.16□□□□□ -0.46
DHFR2-204ENST00000481631 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
DHFR2-204ENST00000481631 ANKRD31Q8N7Z5 1873 aa12.16□□□□□ -0.46
DHFR2-204ENST00000481631 CEP290O15078 2479 aa12.16□□□□□ -0.46
DHFR2-204ENST00000481631 ZPR1O75312 459 aa12.15□□□□□ -0.46
DHFR2-204ENST00000481631 SERPINB2P05120 415 aa12.15□□□□□ -0.46
DHFR2-204ENST00000481631 LMOD1P29536 600 aaPredicted RBP12.15□□□□□ -0.46
DHFR2-204ENST00000481631 NFIXQ14938 502 aa12.15□□□□□ -0.46
DHFR2-204ENST00000481631 GPC2Q8N158 579 aa12.15□□□□□ -0.46
DHFR2-204ENST00000481631 SLC4A5Q9BY07 1137 aa12.15□□□□□ -0.46
DHFR2-204ENST00000481631 SLX4Q8IY92 1834 aa12.15□□□□□ -0.46
DHFR2-204ENST00000481631 ARFGEF2Q9Y6D5 1785 aa12.15□□□□□ -0.46
DHFR2-204ENST00000481631 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
DHFR2-204ENST00000481631 USPL1Q5W0Q7 1092 aa12.14□□□□□ -0.47
DHFR2-204ENST00000481631 HDAC9Q9UKV0 1011 aa12.14□□□□□ -0.47
DHFR2-204ENST00000481631 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
DHFR2-204ENST00000481631 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
DHFR2-204ENST00000481631 RBBP6Q7Z6E9 1792 aaKnown RBP12.13□□□□□ -0.47
DHFR2-204ENST00000481631 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
DHFR2-204ENST00000481631 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
DHFR2-204ENST00000481631 FBXO46Q6PJ61 603 aaPredicted RBP12.12□□□□□ -0.47
DHFR2-204ENST00000481631 SYNE4Q8N205 404 aa12.12□□□□□ -0.47
DHFR2-204ENST00000481631 ZNF408Q9H9D4 720 aa12.12□□□□□ -0.47
DHFR2-204ENST00000481631 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
DHFR2-204ENST00000481631 PAPPA2Q9BXP8 1791 aa12.12□□□□□ -0.47
DHFR2-204ENST00000481631 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
DHFR2-204ENST00000481631 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
DHFR2-204ENST00000481631 USP50Q70EL3 339 aaPredicted RBP12.11□□□□□ -0.47
DHFR2-204ENST00000481631 FZD9O00144 591 aa12.1□□□□□ -0.47
DHFR2-204ENST00000481631 PTPREP23469 700 aa12.1□□□□□ -0.47
DHFR2-204ENST00000481631 PDE6BP35913 854 aa12.1□□□□□ -0.47
DHFR2-204ENST00000481631 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
DHFR2-204ENST00000481631 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
DHFR2-204ENST00000481631 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
DHFR2-204ENST00000481631 PRDM6Q9NQX0 595 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms