RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 TCIRG1Q13488 830 aa22.01■■□□□ 1.11
HSPG2-209ENST00000480900 C8orf58Q8NAV2 365 aa22.01■■□□□ 1.11
HSPG2-209ENST00000480900 PLBD2Q8NHP8 589 aa22.01■■□□□ 1.11
HSPG2-209ENST00000480900 ZNF219Q9P2Y4 722 aaPredicted RBP22.01■■□□□ 1.11
HSPG2-209ENST00000480900 LTBP3Q9NS15 1303 aa22.01■■□□□ 1.11
HSPG2-209ENST00000480900 SENP3-EIF4A1A0A087X0R7 540 aa22■■□□□ 1.11
HSPG2-209ENST00000480900 ELL2O00472 640 aaPredicted RBP22■■□□□ 1.11
HSPG2-209ENST00000480900 UTP14AQ9BVJ6 771 aaKnown RBP22■■□□□ 1.11
HSPG2-209ENST00000480900 ALDH1B1P30837 517 aa21.99■■□□□ 1.11
HSPG2-209ENST00000480900 ANKRD13DQ6ZTN6 518 aa21.99■■□□□ 1.11
HSPG2-209ENST00000480900 NLRP10Q86W26 655 aa21.99■■□□□ 1.11
HSPG2-209ENST00000480900 C7orf43Q8WVR3 580 aa21.99■■□□□ 1.11
HSPG2-209ENST00000480900 PRELPP51888 382 aa21.98■■□□□ 1.11
HSPG2-209ENST00000480900 FAM9BQ8IZU0 186 aa21.98■■□□□ 1.11
HSPG2-209ENST00000480900 TSR2Q969E8 191 aaKnown RBP21.98■■□□□ 1.11
HSPG2-209ENST00000480900 TAOK3Q9H2K8 898 aa21.98■■□□□ 1.11
HSPG2-209ENST00000480900 SLC10A5Q5PT55 438 aa21.97■■□□□ 1.11
HSPG2-209ENST00000480900 CCDC30Q5VVM6 783 aa21.97■■□□□ 1.11
HSPG2-209ENST00000480900 RPGRQ92834 1020 aaKnown RBP21.97■■□□□ 1.11
HSPG2-209ENST00000480900 KIF3CO14782 793 aa21.96■■□□□ 1.11
HSPG2-209ENST00000480900 HOXA10P31260 410 aaPredicted RBP21.96■■□□□ 1.11
HSPG2-209ENST00000480900 CCDC93Q567U6 631 aa21.96■■□□□ 1.11
HSPG2-209ENST00000480900 WDR63Q8IWG1 891 aa21.96■■□□□ 1.11
HSPG2-209ENST00000480900 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
HSPG2-209ENST00000480900 DDX60Q8IY21 1712 aaKnown RBP21.95■■□□□ 1.1
HSPG2-209ENST00000480900 KDM2BQ8NHM5 1336 aa21.95■■□□□ 1.1
HSPG2-209ENST00000480900 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
HSPG2-209ENST00000480900 NLRP3Q96P20 1036 aa21.94■■□□□ 1.1
HSPG2-209ENST00000480900 ISCA1Q9BUE6 129 aa21.94■■□□□ 1.1
HSPG2-209ENST00000480900 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
HSPG2-209ENST00000480900 SH3TC1Q8TE82 1336 aa21.94■■□□□ 1.1
HSPG2-209ENST00000480900 C3orf67Q6ZVT6 689 aa21.93■■□□□ 1.1
HSPG2-209ENST00000480900 RBM17Q96I25 401 aaKnown RBP21.93■■□□□ 1.1
HSPG2-209ENST00000480900 CRAMP1Q96RY5 1269 aa21.93■■□□□ 1.1
HSPG2-209ENST00000480900 PHAXQ9H814 394 aaKnown RBP21.93■■□□□ 1.1
HSPG2-209ENST00000480900 NMRK2Q9NPI5 230 aa21.93■■□□□ 1.1
HSPG2-209ENST00000480900 FANCIQ9NVI1 1328 aa21.92■■□□□ 1.1
HSPG2-209ENST00000480900 TRIM28Q13263 835 aaKnown RBP21.92■■□□□ 1.1
HSPG2-209ENST00000480900 RIC3Q7Z5B4 369 aa21.92■■□□□ 1.1
HSPG2-209ENST00000480900 RTKN2Q8IZC4 609 aa21.92■■□□□ 1.1
HSPG2-209ENST00000480900 SALL2Q9Y467 1007 aaPredicted RBP21.92■■□□□ 1.1
HSPG2-209ENST00000480900 TWISTNBQ3B726 338 aaPredicted RBP21.91■■□□□ 1.1
HSPG2-209ENST00000480900 SNED1Q8TER0 1413 aa21.9■■□□□ 1.1
HSPG2-209ENST00000480900 TAF1P21675 1872 aa21.9■■□□□ 1.1
HSPG2-209ENST00000480900 ATP5J2-PTCD1G3V325 749 aa21.9■■□□□ 1.1
HSPG2-209ENST00000480900 DDX58O95786 925 aaKnown RBP21.9■■□□□ 1.1
HSPG2-209ENST00000480900 FKBP4Q02790 459 aaKnown RBP eCLIP21.9■■□□□ 1.1
HSPG2-209ENST00000480900 CC2D2BQ6DHV5 1058 aa21.9■■□□□ 1.1
HSPG2-209ENST00000480900 STK31Q9BXU1 1019 aa21.9■■□□□ 1.1
HSPG2-209ENST00000480900 GLTPD2A6NH11 291 aa21.89■■□□□ 1.09
HSPG2-209ENST00000480900 HCLS1P14317 486 aaPredicted RBP21.89■■□□□ 1.09
HSPG2-209ENST00000480900 OLFM4Q6UX06 510 aa21.89■■□□□ 1.09
HSPG2-209ENST00000480900 SYNE4Q8N205 404 aa21.89■■□□□ 1.09
HSPG2-209ENST00000480900 GRIPAP1Q4V328 841 aa21.88■■□□□ 1.09
HSPG2-209ENST00000480900 WDR90Q96KV7 1748 aa21.88■■□□□ 1.09
HSPG2-209ENST00000480900 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
HSPG2-209ENST00000480900 TOMM70O94826 608 aa21.86■■□□□ 1.09
HSPG2-209ENST00000480900 PSMD1Q99460 953 aa21.86■■□□□ 1.09
HSPG2-209ENST00000480900 ABCC4O15439 1325 aa21.85■■□□□ 1.09
HSPG2-209ENST00000480900 DPY19L2Q6NUT2 758 aa21.85■■□□□ 1.09
HSPG2-209ENST00000480900 ZNF428Q96B54 188 aa21.85■■□□□ 1.09
HSPG2-209ENST00000480900 FAM89AQ96GI7 184 aa21.85■■□□□ 1.09
HSPG2-209ENST00000480900 MYD88Q99836 296 aa21.85■■□□□ 1.09
HSPG2-209ENST00000480900 METTL22Q9BUU2 404 aaPredicted RBP21.85■■□□□ 1.09
HSPG2-209ENST00000480900 MYH16Q9H6N6 1097 aa21.85■■□□□ 1.09
HSPG2-209ENST00000480900 RRAGCQ9HB90 399 aa21.85■■□□□ 1.09
HSPG2-209ENST00000480900 ZNF277Q9NRM2 450 aaPredicted RBP21.85■■□□□ 1.09
HSPG2-209ENST00000480900 MYH3P11055 1940 aa21.84■■□□□ 1.09
HSPG2-209ENST00000480900 KSR2Q6VAB6 950 aa21.84■■□□□ 1.09
HSPG2-209ENST00000480900 CCDC191Q8NCU4 936 aa21.84■■□□□ 1.09
HSPG2-209ENST00000480900 SPINK5Q9NQ38 1064 aaPredicted RBP21.84■■□□□ 1.09
HSPG2-209ENST00000480900 ZNF521Q96K83 1311 aa21.83■■□□□ 1.09
HSPG2-209ENST00000480900 TCERG1O14776 1098 aaKnown RBP21.83■■□□□ 1.09
HSPG2-209ENST00000480900 VAMP4O75379 141 aa21.83■■□□□ 1.09
HSPG2-209ENST00000480900 EXOSC9Q06265 439 aaKnown RBP21.83■■□□□ 1.09
HSPG2-209ENST00000480900 DDX46Q7L014 1031 aaKnown RBP21.83■■□□□ 1.09
HSPG2-209ENST00000480900 C16orf71Q8IYS4 520 aaPredicted RBP21.83■■□□□ 1.09
HSPG2-209ENST00000480900 ZBTB38Q8NAP3 1195 aaPredicted RBP21.83■■□□□ 1.09
HSPG2-209ENST00000480900 MAP3K2Q9Y2U5 619 aa21.83■■□□□ 1.09
HSPG2-209ENST00000480900 ATP6V0A2Q9Y487 856 aa21.83■■□□□ 1.09
HSPG2-209ENST00000480900 LRRC37AA6NMS7 1700 aa21.83■■□□□ 1.08
HSPG2-209ENST00000480900 BBOX1O75936 387 aa21.82■■□□□ 1.08
HSPG2-209ENST00000480900 SLC4A2P04920 1241 aa21.82■■□□□ 1.08
HSPG2-209ENST00000480900 HSP90B1P14625 803 aaKnown RBP21.82■■□□□ 1.08
HSPG2-209ENST00000480900 IARSP41252 1262 aaKnown RBP21.82■■□□□ 1.08
HSPG2-209ENST00000480900 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
HSPG2-209ENST00000480900 RBM46Q8TBY0 533 aaKnown RBP21.82■■□□□ 1.08
HSPG2-209ENST00000480900 SCN4AP35499 1836 aa21.82■■□□□ 1.08
HSPG2-209ENST00000480900 PI4KAP2A4QPH2 592 aa21.81■■□□□ 1.08
HSPG2-209ENST00000480900 CCER2I3L3R5 266 aa21.81■■□□□ 1.08
HSPG2-209ENST00000480900 IRS4O14654 1257 aaPredicted RBP21.81■■□□□ 1.08
HSPG2-209ENST00000480900 VEGFAP15692 232 aaPredicted RBP21.81■■□□□ 1.08
HSPG2-209ENST00000480900 GRAPQ13588 217 aa21.81■■□□□ 1.08
HSPG2-209ENST00000480900 PI4KAP1Q8N8J0 262 aa21.81■■□□□ 1.08
HSPG2-209ENST00000480900 GRAPLQ8TC17 118 aaPredicted RBP21.81■■□□□ 1.08
HSPG2-209ENST00000480900 TMX4Q9H1E5 349 aaPredicted RBP21.81■■□□□ 1.08
HSPG2-209ENST00000480900 CWC25Q9NXE8 425 aaPredicted RBP21.81■■□□□ 1.08
HSPG2-209ENST00000480900 PCCAP05165 728 aaPredicted RBP21.8■■□□□ 1.08
HSPG2-209ENST00000480900 RTL5Q5HYW3 569 aaPredicted RBP21.8■■□□□ 1.08
HSPG2-209ENST00000480900 G2E3Q7L622 706 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms