RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
TDP2-205ENST00000480495 HOXA10P31260 410 aaPredicted RBP19.45■□□□□ 0.7
TDP2-205ENST00000480495 ANKRD13DQ6ZTN6 518 aa19.45■□□□□ 0.7
TDP2-205ENST00000480495 WWC1Q8IX03 1113 aa19.45■□□□□ 0.7
TDP2-205ENST00000480495 PLBD2Q8NHP8 589 aa19.45■□□□□ 0.7
TDP2-205ENST00000480495 RPGRQ92834 1020 aaKnown RBP19.45■□□□□ 0.7
TDP2-205ENST00000480495 NMRK2Q9NPI5 230 aa19.45■□□□□ 0.7
TDP2-205ENST00000480495 SLC10A5Q5PT55 438 aa19.44■□□□□ 0.7
TDP2-205ENST00000480495 NLRP10Q86W26 655 aa19.44■□□□□ 0.7
TDP2-205ENST00000480495 GLTPD2A6NH11 291 aa19.43■□□□□ 0.7
TDP2-205ENST00000480495 RTKN2Q8IZC4 609 aa19.43■□□□□ 0.7
TDP2-205ENST00000480495 NLRP3Q96P20 1036 aa19.43■□□□□ 0.7
TDP2-205ENST00000480495 IL16Q14005 1332 aa19.43■□□□□ 0.7
TDP2-205ENST00000480495 FER1L6Q2WGJ9 1857 aa19.43■□□□□ 0.7
TDP2-205ENST00000480495 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
TDP2-205ENST00000480495 ELL2O00472 640 aaPredicted RBP19.42■□□□□ 0.7
TDP2-205ENST00000480495 TOMM70O94826 608 aa19.42■□□□□ 0.7
TDP2-205ENST00000480495 C8orf58Q8NAV2 365 aa19.42■□□□□ 0.7
TDP2-205ENST00000480495 RBM17Q96I25 401 aaKnown RBP19.42■□□□□ 0.7
TDP2-205ENST00000480495 CRAMP1Q96RY5 1269 aa19.42■□□□□ 0.7
TDP2-205ENST00000480495 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
TDP2-205ENST00000480495 CCDC30Q5VVM6 783 aa19.41■□□□□ 0.7
TDP2-205ENST00000480495 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
TDP2-205ENST00000480495 C16orf71Q8IYS4 520 aaPredicted RBP19.41■□□□□ 0.7
TDP2-205ENST00000480495 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
TDP2-205ENST00000480495 DPY19L2Q6NUT2 758 aa19.4■□□□□ 0.7
TDP2-205ENST00000480495 RRAGCQ9HB90 399 aa19.4■□□□□ 0.7
TDP2-205ENST00000480495 SH3TC1Q8TE82 1336 aa19.4■□□□□ 0.7
TDP2-205ENST00000480495 CACNA1SQ13698 1873 aa19.39■□□□□ 0.7
TDP2-205ENST00000480495 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
TDP2-205ENST00000480495 GRIPAP1Q4V328 841 aa19.39■□□□□ 0.69
TDP2-205ENST00000480495 C3orf67Q6ZVT6 689 aa19.39■□□□□ 0.69
TDP2-205ENST00000480495 TSR2Q969E8 191 aaKnown RBP19.39■□□□□ 0.69
TDP2-205ENST00000480495 ISCA1Q9BUE6 129 aa19.39■□□□□ 0.69
TDP2-205ENST00000480495 ANKRD36CQ5JPF3 1778 aa19.39■□□□□ 0.69
TDP2-205ENST00000480495 TRIM28Q13263 835 aaKnown RBP19.38■□□□□ 0.69
TDP2-205ENST00000480495 OLFM4Q6UX06 510 aa19.38■□□□□ 0.69
TDP2-205ENST00000480495 WDR63Q8IWG1 891 aa19.38■□□□□ 0.69
TDP2-205ENST00000480495 RBM46Q8TBY0 533 aaKnown RBP19.38■□□□□ 0.69
TDP2-205ENST00000480495 TIAM2Q8IVF5 1701 aa19.37■□□□□ 0.69
TDP2-205ENST00000480495 HSPA6P17066 643 aa19.37■□□□□ 0.69
TDP2-205ENST00000480495 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
TDP2-205ENST00000480495 TSPYL6Q8N831 410 aa19.37■□□□□ 0.69
TDP2-205ENST00000480495 PSMD1Q99460 953 aa19.37■□□□□ 0.69
TDP2-205ENST00000480495 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
TDP2-205ENST00000480495 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
TDP2-205ENST00000480495 DDX58O95786 925 aaKnown RBP19.36■□□□□ 0.69
TDP2-205ENST00000480495 HCLS1P14317 486 aaPredicted RBP19.36■□□□□ 0.69
TDP2-205ENST00000480495 VEGFAP15692 232 aaPredicted RBP19.36■□□□□ 0.69
TDP2-205ENST00000480495 FAM9BQ8IZU0 186 aa19.36■□□□□ 0.69
TDP2-205ENST00000480495 CCDC88AQ3V6T2 1871 aa19.36■□□□□ 0.69
TDP2-205ENST00000480495 DICER1Q9UPY3 1922 aaKnown RBP19.35■□□□□ 0.69
TDP2-205ENST00000480495 ATP5J2-PTCD1G3V325 749 aa19.35■□□□□ 0.69
TDP2-205ENST00000480495 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
TDP2-205ENST00000480495 SYNE4Q8N205 404 aa19.35■□□□□ 0.69
TDP2-205ENST00000480495 STK31Q9BXU1 1019 aa19.35■□□□□ 0.69
TDP2-205ENST00000480495 ZNF277Q9NRM2 450 aaPredicted RBP19.35■□□□□ 0.69
TDP2-205ENST00000480495 SNED1Q8TER0 1413 aa19.34■□□□□ 0.69
TDP2-205ENST00000480495 FSTL1Q12841 308 aa19.34■□□□□ 0.69
TDP2-205ENST00000480495 TMX4Q9H1E5 349 aaPredicted RBP19.34■□□□□ 0.69
TDP2-205ENST00000480495 ABCC4O15439 1325 aa19.33■□□□□ 0.69
TDP2-205ENST00000480495 BBOX1O75936 387 aa19.33■□□□□ 0.68
TDP2-205ENST00000480495 IARSP41252 1262 aaKnown RBP19.33■□□□□ 0.68
TDP2-205ENST00000480495 DDX46Q7L014 1031 aaKnown RBP19.33■□□□□ 0.68
TDP2-205ENST00000480495 SALL2Q9Y467 1007 aaPredicted RBP19.33■□□□□ 0.68
TDP2-205ENST00000480495 FAM89AQ96GI7 184 aa19.32■□□□□ 0.68
TDP2-205ENST00000480495 ATP6V0A2Q9Y487 856 aa19.32■□□□□ 0.68
TDP2-205ENST00000480495 FANCIQ9NVI1 1328 aa19.31■□□□□ 0.68
TDP2-205ENST00000480495 HSP90B1P14625 803 aaKnown RBP19.31■□□□□ 0.68
TDP2-205ENST00000480495 CCDC191Q8NCU4 936 aa19.31■□□□□ 0.68
TDP2-205ENST00000480495 MYD88Q99836 296 aa19.31■□□□□ 0.68
TDP2-205ENST00000480495 WDR90Q96KV7 1748 aa19.31■□□□□ 0.68
TDP2-205ENST00000480495 POTECB2RU33 542 aa19.3■□□□□ 0.68
TDP2-205ENST00000480495 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
TDP2-205ENST00000480495 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
TDP2-205ENST00000480495 GRAPQ13588 217 aa19.3■□□□□ 0.68
TDP2-205ENST00000480495 SF3B3Q15393 1217 aaKnown RBP19.3■□□□□ 0.68
TDP2-205ENST00000480495 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
TDP2-205ENST00000480495 ZBTB38Q8NAP3 1195 aaPredicted RBP19.3■□□□□ 0.68
TDP2-205ENST00000480495 SMC1BQ8NDV3 1235 aa19.3■□□□□ 0.68
TDP2-205ENST00000480495 GRAPLQ8TC17 118 aaPredicted RBP19.3■□□□□ 0.68
TDP2-205ENST00000480495 JDP2Q8WYK2 163 aa19.3■□□□□ 0.68
TDP2-205ENST00000480495 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
TDP2-205ENST00000480495 METTL22Q9BUU2 404 aaPredicted RBP19.3■□□□□ 0.68
TDP2-205ENST00000480495 FZD9O00144 591 aa19.29■□□□□ 0.68
TDP2-205ENST00000480495 IRS4O14654 1257 aaPredicted RBP19.29■□□□□ 0.68
TDP2-205ENST00000480495 APLP1P51693 650 aa19.29■□□□□ 0.68
TDP2-205ENST00000480495 KSR2Q6VAB6 950 aa19.29■□□□□ 0.68
TDP2-205ENST00000480495 SP8Q8IXZ3 490 aa19.29■□□□□ 0.68
TDP2-205ENST00000480495 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
TDP2-205ENST00000480495 L3MBTL3Q96JM7 780 aaPredicted RBP19.28■□□□□ 0.68
TDP2-205ENST00000480495 VPS33BQ9H267 617 aa19.28■□□□□ 0.68
TDP2-205ENST00000480495 CWC25Q9NXE8 425 aaPredicted RBP19.28■□□□□ 0.68
TDP2-205ENST00000480495 MAP3K2Q9Y2U5 619 aa19.28■□□□□ 0.68
TDP2-205ENST00000480495 LAMB2P55268 1798 aa19.27■□□□□ 0.68
TDP2-205ENST00000480495 PI4KAP2A4QPH2 592 aa19.27■□□□□ 0.68
TDP2-205ENST00000480495 IQCA1LA6NCM1 817 aa19.27■□□□□ 0.68
TDP2-205ENST00000480495 PCCAP05165 728 aaPredicted RBP19.27■□□□□ 0.68
TDP2-205ENST00000480495 RTL5Q5HYW3 569 aaPredicted RBP19.27■□□□□ 0.68
TDP2-205ENST00000480495 PI4KAP1Q8N8J0 262 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms