RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
COMMD4-203ENST00000480484 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
COMMD4-203ENST00000480484 GPATCH3Q96I76 525 aa12.14□□□□□ -0.47
COMMD4-203ENST00000480484 KIF20AO95235 890 aa12.13□□□□□ -0.47
COMMD4-203ENST00000480484 SECISBP2LQ93073 1101 aaKnown RBP12.13□□□□□ -0.47
COMMD4-203ENST00000480484 ATP10DQ9P241 1426 aa12.13□□□□□ -0.47
COMMD4-203ENST00000480484 COL16A1Q07092 1604 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-203ENST00000480484 SSH2Q76I76 1423 aa12.13□□□□□ -0.47
COMMD4-203ENST00000480484 LETM1O95202 739 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-203ENST00000480484 KCNA1Q09470 495 aa12.13□□□□□ -0.47
COMMD4-203ENST00000480484 SPC24Q8NBT2 197 aa12.13□□□□□ -0.47
COMMD4-203ENST00000480484 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-203ENST00000480484 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
COMMD4-203ENST00000480484 GORABQ5T7V8 394 aa12.13□□□□□ -0.47
COMMD4-203ENST00000480484 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-203ENST00000480484 TCF3P15923 654 aa12.12□□□□□ -0.47
COMMD4-203ENST00000480484 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.474e-9■■■■■ 28.7
COMMD4-203ENST00000480484 CHL1O00533 1208 aa12.12□□□□□ -0.47
COMMD4-203ENST00000480484 FKBP5Q13451 457 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-203ENST00000480484 API5Q9BZZ5 524 aaKnown RBP12.12□□□□□ -0.47
COMMD4-203ENST00000480484 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
COMMD4-203ENST00000480484 USP31Q70CQ4 1352 aa12.12□□□□□ -0.47
COMMD4-203ENST00000480484 RGS12O14924 1447 aa12.12□□□□□ -0.47
COMMD4-203ENST00000480484 PNMA6EA0A0J9YXQ4 647 aa12.11□□□□□ -0.47
COMMD4-203ENST00000480484 KCNA6P17658 529 aa12.11□□□□□ -0.47
COMMD4-203ENST00000480484 RILPL2Q969X0 211 aa12.11□□□□□ -0.47
COMMD4-203ENST00000480484 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
COMMD4-203ENST00000480484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-203ENST00000480484 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-203ENST00000480484 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
COMMD4-203ENST00000480484 CGNQ9P2M7 1197 aaKnown RBP12.11□□□□□ -0.47
COMMD4-203ENST00000480484 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
COMMD4-203ENST00000480484 EYA1Q99502 592 aa12.11□□□□□ -0.47
COMMD4-203ENST00000480484 DIAPH3Q9NSV4 1193 aa12.1□□□□□ -0.47
COMMD4-203ENST00000480484 AMPHP49418 695 aa12.1□□□□□ -0.47
COMMD4-203ENST00000480484 CRB1P82279 1406 aa12.1□□□□□ -0.47
COMMD4-203ENST00000480484 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-203ENST00000480484 ANO2Q9NQ90 1003 aa12.1□□□□□ -0.47
COMMD4-203ENST00000480484 PYCARDQ9ULZ3 195 aa12.1□□□□□ -0.47
COMMD4-203ENST00000480484 TBX22Q9Y458 520 aa12.1□□□□□ -0.47
COMMD4-203ENST00000480484 AP5Z1O43299 807 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 RFX1P22670 979 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 RTL1A6NKG5 1358 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 NLRP6P59044 892 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 UVSSAQ2YD98 709 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-203ENST00000480484 PIK3C2AO00443 1686 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 ANKRD44Q8N8A2 993 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
COMMD4-203ENST00000480484 CAMTA1Q9Y6Y1 1673 aa12.08□□□□□ -0.48
COMMD4-203ENST00000480484 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
COMMD4-203ENST00000480484 SPTLC3Q9NUV7 552 aa12.08□□□□□ -0.48
COMMD4-203ENST00000480484 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.48
COMMD4-203ENST00000480484 PLCH1Q4KWH8 1693 aa12.08□□□□□ -0.48
COMMD4-203ENST00000480484 TRIM6-TRIM34B2RNG4 842 aa12.08□□□□□ -0.48
COMMD4-203ENST00000480484 MCCP23508 829 aa12.08□□□□□ -0.48
COMMD4-203ENST00000480484 USHBP1Q8N6Y0 703 aa12.08□□□□□ -0.48
COMMD4-203ENST00000480484 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-203ENST00000480484 FIBPO43427 364 aa12.07□□□□□ -0.48
COMMD4-203ENST00000480484 PDE1AP54750 535 aa12.07□□□□□ -0.48
COMMD4-203ENST00000480484 FLT4P35916 1363 aa12.07□□□□□ -0.48
COMMD4-203ENST00000480484 MCM2P49736 904 aa12.07□□□□□ -0.48
COMMD4-203ENST00000480484 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
COMMD4-203ENST00000480484 SBNO1A3KN83 1393 aa12.07□□□□□ -0.48
COMMD4-203ENST00000480484 TTC21AQ8NDW8 1320 aa12.07□□□□□ -0.48
COMMD4-203ENST00000480484 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-203ENST00000480484 THEMISQ8N1K5 641 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-203ENST00000480484 ARHGEF10O15013 1369 aa12.06□□□□□ -0.48
COMMD4-203ENST00000480484 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
COMMD4-203ENST00000480484 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
COMMD4-203ENST00000480484 LARGE1O95461 756 aa12.06□□□□□ -0.48
COMMD4-203ENST00000480484 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
COMMD4-203ENST00000480484 KIAA1524Q8TCG1 905 aa12.06□□□□□ -0.48
COMMD4-203ENST00000480484 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
COMMD4-203ENST00000480484 KCNF1Q9H3M0 494 aa12.06□□□□□ -0.48
COMMD4-203ENST00000480484 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
COMMD4-203ENST00000480484 MX1P20591 662 aa12.05□□□□□ -0.48
COMMD4-203ENST00000480484 CUL4AQ13619 759 aa12.05□□□□□ -0.48
COMMD4-203ENST00000480484 RPAP2Q8IXW5 612 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-203ENST00000480484 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.05□□□□□ -0.48
COMMD4-203ENST00000480484 VGLL3A8MV65 326 aa12.05□□□□□ -0.48
COMMD4-203ENST00000480484 RTF1Q92541 710 aaKnown RBP12.05□□□□□ -0.48
COMMD4-203ENST00000480484 FAM208AQ9UK61 1670 aaKnown RBP12.05□□□□□ -0.48
COMMD4-203ENST00000480484 IGSF1Q8N6C5 1336 aa12.05□□□□□ -0.48
COMMD4-203ENST00000480484 ANXA1P04083 346 aa12.05□□□□□ -0.48
COMMD4-203ENST00000480484 HOXC9P31274 260 aa12.04□□□□□ -0.48
COMMD4-203ENST00000480484 ABTB2Q8N961 1025 aa12.04□□□□□ -0.48
COMMD4-203ENST00000480484 C16orf45Q96MC5 204 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-203ENST00000480484 NRAPQ86VF7 1730 aa12.04□□□□□ -0.48
COMMD4-203ENST00000480484 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
COMMD4-203ENST00000480484 ZNF16P17020 682 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-203ENST00000480484 NOM1Q5C9Z4 860 aaKnown RBP12.04□□□□□ -0.48
COMMD4-203ENST00000480484 ANKRD7Q92527 254 aa12.04□□□□□ -0.48
COMMD4-203ENST00000480484 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
COMMD4-203ENST00000480484 ESYT1Q9BSJ8 1104 aa12.04□□□□□ -0.48
COMMD4-203ENST00000480484 NAA30Q147X3 362 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-203ENST00000480484 DRC7Q8IY82 874 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms