RNA–Protein interactions for RNA: ENST00000480371.1

TTC23-208, Transcript of tetratricopeptide repeat domain 23, human

TSL 5

Gene TTC23, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC23-208	ENST00000480371	SLC10A5	Q5PT55	438 aa		13.89	□□□□□ -0.19
TTC23-208	ENST00000480371	RIC3	Q7Z5B4	369 aa		13.89	□□□□□ -0.19
TTC23-208	ENST00000480371	C8orf58	Q8NAV2	365 aa		13.89	□□□□□ -0.19
TTC23-208	ENST00000480371	ZNF526	Q8TF50	670 aa	Predicted RBP	13.89	□□□□□ -0.19
TTC23-208	ENST00000480371	RBM17	Q96I25	401 aa	Known RBP	13.89	□□□□□ -0.19
TTC23-208	ENST00000480371	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.89	□□□□□ -0.19
TTC23-208	ENST00000480371	TRMT112	Q9UI30	125 aa	Known RBP	13.89	□□□□□ -0.19
TTC23-208	ENST00000480371	COL11A2	P13942	1736 aa	Predicted RBP	13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	NTSR2	O95665	410 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	CCDC93	Q567U6	631 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	CC2D2B	Q6DHV5	1058 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	NLRP10	Q86W26	655 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	RTKN2	Q8IZC4	609 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	TAOK3	Q9H2K8	898 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	MYH16	Q9H6N6	1097 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	SALL2	Q9Y467	1007 aa	Predicted RBP	13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	SBF1	O95248	1867 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	ANKRD36C	Q5JPF3	1778 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	ARFGEF2	Q9Y6D5	1785 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	LTBP3	Q9NS15	1303 aa		13.88	□□□□□ -0.19
TTC23-208	ENST00000480371	HOXA10	P31260	410 aa	Predicted RBP	13.87	□□□□□ -0.19
TTC23-208	ENST00000480371	C1QTNF8	P60827	252 aa		13.87	□□□□□ -0.19
TTC23-208	ENST00000480371	TWISTNB	Q3B726	338 aa	Predicted RBP	13.87	□□□□□ -0.19
TTC23-208	ENST00000480371	TSR2	Q969E8	191 aa	Known RBP	13.87	□□□□□ -0.19
TTC23-208	ENST00000480371	CRAMP1	Q96RY5	1269 aa		13.87	□□□□□ -0.19
TTC23-208	ENST00000480371	SH3TC1	Q8TE82	1336 aa		13.87	□□□□□ -0.19
TTC23-208	ENST00000480371	UTRN	P46939	3433 aa		13.86	□□□□□ -0.19
TTC23-208	ENST00000480371	SLX4	Q8IY92	1834 aa		13.86	□□□□□ -0.19
TTC23-208	ENST00000480371	RASSF7	Q02833	373 aa		13.86	□□□□□ -0.19
TTC23-208	ENST00000480371	TRIM28	Q13263	835 aa	Known RBP	13.86	□□□□□ -0.19
TTC23-208	ENST00000480371	DPY19L2	Q6NUT2	758 aa		13.86	□□□□□ -0.19
TTC23-208	ENST00000480371	CACNA1S	Q13698	1873 aa		13.85	□□□□□ -0.19
TTC23-208	ENST00000480371	SENP3-EIF4A1	A0A087X0R7	540 aa		13.85	□□□□□ -0.19
TTC23-208	ENST00000480371	NFKBIE	O00221	500 aa		13.85	□□□□□ -0.19
TTC23-208	ENST00000480371	FER1L6	Q2WGJ9	1857 aa		13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	ABCC12	Q96J65	1359 aa		13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	GOLGB1	Q14789	3259 aa	Known RBP	13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	NEXN	Q0ZGT2	675 aa		13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	TSPYL6	Q8N831	410 aa		13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	C7orf43	Q8WVR3	580 aa		13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	ISCA1	Q9BUE6	129 aa		13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	PHAX	Q9H814	394 aa	Known RBP	13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	CCDC88A	Q3V6T2	1871 aa		13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	FANCI	Q9NVI1	1328 aa		13.84	□□□□□ -0.19
TTC23-208	ENST00000480371	BBOX1	O75936	387 aa		13.83	□□□□□ -0.2
TTC23-208	ENST00000480371	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
TTC23-208	ENST00000480371	KSR2	Q6VAB6	950 aa		13.83	□□□□□ -0.2
TTC23-208	ENST00000480371	DDX46	Q7L014	1031 aa	Known RBP	13.83	□□□□□ -0.2
TTC23-208	ENST00000480371	CCDC191	Q8NCU4	936 aa		13.83	□□□□□ -0.2
TTC23-208	ENST00000480371	CACNA1F	O60840	1977 aa		13.82	□□□□□ -0.2
TTC23-208	ENST00000480371	GLTPD2	A6NH11	291 aa		13.82	□□□□□ -0.2
TTC23-208	ENST00000480371	ATP5J2-PTCD1	G3V325	749 aa		13.82	□□□□□ -0.2
TTC23-208	ENST00000480371	SLC4A2	P04920	1241 aa		13.82	□□□□□ -0.2
TTC23-208	ENST00000480371	HCLS1	P14317	486 aa	Predicted RBP	13.82	□□□□□ -0.2
TTC23-208	ENST00000480371	TMC4	Q7Z404	712 aa		13.82	□□□□□ -0.2
TTC23-208	ENST00000480371	METTL22	Q9BUU2	404 aa	Predicted RBP	13.82	□□□□□ -0.2
TTC23-208	ENST00000480371	PPEF1	O14829	653 aa	Predicted RBP	13.81	□□□□□ -0.2
TTC23-208	ENST00000480371	TOMM70	O94826	608 aa		13.81	□□□□□ -0.2
TTC23-208	ENST00000480371	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.81	□□□□□ -0.2
TTC23-208	ENST00000480371	PSMD1	Q99460	953 aa		13.81	□□□□□ -0.2
TTC23-208	ENST00000480371	MYD88	Q99836	296 aa		13.81	□□□□□ -0.2
TTC23-208	ENST00000480371	CWC25	Q9NXE8	425 aa	Predicted RBP	13.81	□□□□□ -0.2
TTC23-208	ENST00000480371	DICER1	Q9UPY3	1922 aa	Known RBP	13.81	□□□□□ -0.2
TTC23-208	ENST00000480371	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.81	□□□□□ -0.2
TTC23-208	ENST00000480371		E9PSI1	815 aa		13.8	□□□□□ -0.2
TTC23-208	ENST00000480371	VAMP4	O75379	141 aa		13.8	□□□□□ -0.2
TTC23-208	ENST00000480371	EXOSC9	Q06265	439 aa	Known RBP	13.8	□□□□□ -0.2
TTC23-208	ENST00000480371	SYNE4	Q8N205	404 aa		13.8	□□□□□ -0.2
TTC23-208	ENST00000480371	JDP2	Q8WYK2	163 aa		13.8	□□□□□ -0.2
TTC23-208	ENST00000480371	FAM89A	Q96GI7	184 aa		13.8	□□□□□ -0.2
TTC23-208	ENST00000480371	MAP3K2	Q9Y2U5	619 aa		13.8	□□□□□ -0.2
TTC23-208	ENST00000480371	PI4KAP2	A4QPH2	592 aa		13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	IRS4	O14654	1257 aa	Predicted RBP	13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	KIF3C	O14782	793 aa		13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	VEGFA	P15692	232 aa	Predicted RBP	13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	SF3B3	Q15393	1217 aa	Known RBP	13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	SP8	Q8IXZ3	490 aa		13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	PI4KAP1	Q8N8J0	262 aa		13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	SUPT20H	Q8NEM7	779 aa		13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	VPS33B	Q9H267	617 aa		13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	RRAGC	Q9HB90	399 aa		13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	ATP6V0A2	Q9Y487	856 aa		13.79	□□□□□ -0.2
TTC23-208	ENST00000480371	PCCA	P05165	728 aa	Predicted RBP	13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	IARS	P41252	1262 aa	Known RBP	13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	PRELP	P51888	382 aa		13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	GRAP	Q13588	217 aa		13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	GRAPL	Q8TC17	118 aa	Predicted RBP	13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	NMRK2	Q9NPI5	230 aa		13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	ZNF521	Q96K83	1311 aa		13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	TIAM2	Q8IVF5	1701 aa		13.78	□□□□□ -0.2
TTC23-208	ENST00000480371	TCERG1	O14776	1098 aa	Known RBP	13.77	□□□□□ -0.21
TTC23-208	ENST00000480371	ABCC4	O15439	1325 aa		13.77	□□□□□ -0.21
TTC23-208	ENST00000480371	FLII	Q13045	1269 aa		13.77	□□□□□ -0.21
TTC23-208	ENST00000480371	FKBP5	Q13451	457 aa	Predicted RBP	13.77	□□□□□ -0.21
TTC23-208	ENST00000480371	C3orf67	Q6ZVT6	689 aa		13.77	□□□□□ -0.21
TTC23-208	ENST00000480371	RBM46	Q8TBY0	533 aa	Known RBP	13.77	□□□□□ -0.21
TTC23-208	ENST00000480371	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.77	□□□□□ -0.21
TTC23-208	ENST00000480371	LAMB2	P55268	1798 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms