RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 RIC3Q7Z5B4 369 aa13.08□□□□□ -0.32
LINC00173-203ENST00000480237 DNAJC10Q8IXB1 793 aa13.08□□□□□ -0.32
LINC00173-203ENST00000480237 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
LINC00173-203ENST00000480237 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
LINC00173-203ENST00000480237 COPS6Q7L5N1 327 aa13.07□□□□□ -0.32
LINC00173-203ENST00000480237 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
LINC00173-203ENST00000480237 STARD3NLO95772 234 aa13.07□□□□□ -0.32
LINC00173-203ENST00000480237 A1BGP04217 495 aa13.07□□□□□ -0.32
LINC00173-203ENST00000480237 NEXNQ0ZGT2 675 aa13.07□□□□□ -0.32
LINC00173-203ENST00000480237 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
LINC00173-203ENST00000480237 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
LINC00173-203ENST00000480237 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
LINC00173-203ENST00000480237 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
LINC00173-203ENST00000480237 ALDH1L1O75891 902 aa13.06□□□□□ -0.32
LINC00173-203ENST00000480237 GNAI2P04899 355 aa13.06□□□□□ -0.32
LINC00173-203ENST00000480237 UBTFL1P0CB47 393 aaPredicted RBP13.06□□□□□ -0.32
LINC00173-203ENST00000480237 IRX5P78411 483 aaPredicted RBP13.06□□□□□ -0.32
LINC00173-203ENST00000480237 LRP10Q7Z4F1 713 aa13.06□□□□□ -0.32
LINC00173-203ENST00000480237 SEPT12Q8IYM1 358 aa13.06□□□□□ -0.32
LINC00173-203ENST00000480237 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
LINC00173-203ENST00000480237 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
LINC00173-203ENST00000480237 KCNQ2O43526 872 aa13.05□□□□□ -0.32
LINC00173-203ENST00000480237 PLCG2P16885 1265 aa13.05□□□□□ -0.32
LINC00173-203ENST00000480237 ANKRD13DQ6ZTN6 518 aa13.05□□□□□ -0.32
LINC00173-203ENST00000480237 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
LINC00173-203ENST00000480237 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
LINC00173-203ENST00000480237 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
LINC00173-203ENST00000480237 ZNF330Q9Y3S2 320 aaPredicted RBP13.05□□□□□ -0.32
LINC00173-203ENST00000480237 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
LINC00173-203ENST00000480237 RGS3P49796 1198 aa13.04□□□□□ -0.32
LINC00173-203ENST00000480237 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
LINC00173-203ENST00000480237 CEP85Q6P2H3 762 aa13.04□□□□□ -0.32
LINC00173-203ENST00000480237 RPAP2Q8IXW5 612 aaPredicted RBP13.04□□□□□ -0.32
LINC00173-203ENST00000480237 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
LINC00173-203ENST00000480237 SLC4A9Q96Q91 983 aa13.04□□□□□ -0.32
LINC00173-203ENST00000480237 MYD88Q99836 296 aa13.04□□□□□ -0.32
LINC00173-203ENST00000480237 LRRFIP2Q9Y608 721 aaKnown RBP13.04□□□□□ -0.32
LINC00173-203ENST00000480237 MYH7P12883 1935 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 LOC102724428A0A0B4J2F2 783 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
LINC00173-203ENST00000480237 HMMRO75330 724 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 SIK1P57059 783 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 CWF19L2Q2TBE0 894 aaKnown RBP13.03□□□□□ -0.32
LINC00173-203ENST00000480237 FAM182BQ5T319 152 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 PLBD2Q8NHP8 589 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
LINC00173-203ENST00000480237 USP44Q9H0E7 712 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 OCEL1Q9H607 264 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 C9orf78Q9NZ63 289 aaPredicted RBP13.03□□□□□ -0.32
LINC00173-203ENST00000480237 PDZRN3Q9UPQ7 1066 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 MYH13Q9UKX3 1938 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
LINC00173-203ENST00000480237 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 KIF6Q6ZMV9 814 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
LINC00173-203ENST00000480237 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 GCC1Q96CN9 775 aa13.03□□□□□ -0.32
LINC00173-203ENST00000480237 IBTKQ9P2D0 1353 aaPredicted RBP13.02□□□□□ -0.32
LINC00173-203ENST00000480237 TAF1P21675 1872 aa13.02□□□□□ -0.33
LINC00173-203ENST00000480237 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
LINC00173-203ENST00000480237 POTEFA5A3E0 1075 aa13.01□□□□□ -0.33
LINC00173-203ENST00000480237 NEURL1BA8MQ27 555 aa13.01□□□□□ -0.33
LINC00173-203ENST00000480237 GTPBP6O43824 516 aaPredicted RBP13.01□□□□□ -0.33
LINC00173-203ENST00000480237 NPM2Q86SE8 214 aaKnown RBP13.01□□□□□ -0.33
LINC00173-203ENST00000480237 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
LINC00173-203ENST00000480237 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
LINC00173-203ENST00000480237 ZBTB3Q9H5J0 574 aa13.01□□□□□ -0.33
LINC00173-203ENST00000480237 HDAC5Q9UQL6 1122 aa13.01□□□□□ -0.33
LINC00173-203ENST00000480237 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
LINC00173-203ENST00000480237 GRM8O00222 908 aa13□□□□□ -0.33
LINC00173-203ENST00000480237 IGKV5-2P06315 115 aa13□□□□□ -0.33
LINC00173-203ENST00000480237 NBPF7P0C2Y1 421 aaPredicted RBP13□□□□□ -0.33
LINC00173-203ENST00000480237 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
LINC00173-203ENST00000480237 MS4A4AQ96JQ5 239 aa13□□□□□ -0.33
LINC00173-203ENST00000480237 CACNA1SQ13698 1873 aa13□□□□□ -0.33
LINC00173-203ENST00000480237 PDCD7Q8N8D1 485 aaKnown RBP12.99□□□□□ -0.33
LINC00173-203ENST00000480237 ARXQ96QS3 562 aa12.99□□□□□ -0.33
LINC00173-203ENST00000480237 CCDC87Q9NVE4 849 aa12.99□□□□□ -0.33
LINC00173-203ENST00000480237 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
LINC00173-203ENST00000480237 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
LINC00173-203ENST00000480237 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
LINC00173-203ENST00000480237 ITPK1Q13572 414 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 GCKRQ14397 625 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
LINC00173-203ENST00000480237 RYDENQ9NUL5 291 aaKnown RBP12.98□□□□□ -0.33
LINC00173-203ENST00000480237 COL15A1P39059 1388 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 UTYO14607 1347 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 NUCB1Q02818 461 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
LINC00173-203ENST00000480237 PNMA6EA0A0J9YXQ4 647 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms