RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 PKD1L3Q7Z443 1732 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 CCDC173Q0VFZ6 552 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 ADCK5Q3MIX3 580 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 RUFY3Q7L099 469 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 RBSNQ9H1K0 784 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 MRC1P22897 1456 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 SYCE3A1L190 88 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 ATP5J2-PTCD1G3V325 749 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 PTCD1O75127 700 aaKnown RBP20.63■□□□□ 0.89
PKD1-213ENST00000480227 CABP4P57796 275 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 DDX54Q8TDD1 881 aaKnown RBP20.63■□□□□ 0.89
PKD1-213ENST00000480227 GDPD2Q9HCC8 539 aa20.63■□□□□ 0.89
PKD1-213ENST00000480227 DTNBO60941 627 aa20.62■□□□□ 0.89
PKD1-213ENST00000480227 ARFGEF2Q9Y6D5 1785 aa20.61■□□□□ 0.89
PKD1-213ENST00000480227 NMIQ13287 307 aaPredicted RBP20.61■□□□□ 0.89
PKD1-213ENST00000480227 UBE3BQ7Z3V4 1068 aa20.61■□□□□ 0.89
PKD1-213ENST00000480227 LARGE1O95461 756 aa20.6■□□□□ 0.89
PKD1-213ENST00000480227 JAKMIP1Q96N16 626 aaKnown RBP20.6■□□□□ 0.89
PKD1-213ENST00000480227 RPAP1Q9BWH6 1393 aaPredicted RBP20.6■□□□□ 0.89
PKD1-213ENST00000480227 PPP1R9BQ96SB3 815 aa20.6■□□□□ 0.89
PKD1-213ENST00000480227 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
PKD1-213ENST00000480227 CCDC171Q6TFL3 1326 aa20.6■□□□□ 0.89
PKD1-213ENST00000480227 WDR33Q9C0J8 1336 aaKnown RBP20.6■□□□□ 0.89
PKD1-213ENST00000480227 MBD3O95983 291 aa20.59■□□□□ 0.89
PKD1-213ENST00000480227 ABCC6O95255 1503 aa20.59■□□□□ 0.89
PKD1-213ENST00000480227 EDC3Q96F86 508 aaKnown RBP20.59■□□□□ 0.89
PKD1-213ENST00000480227 A0A0D9SFI3 127 aa20.58■□□□□ 0.89
PKD1-213ENST00000480227 FSD1Q9BTV5 496 aa20.58■□□□□ 0.89
PKD1-213ENST00000480227 GLI3P10071 1580 aa20.58■□□□□ 0.89
PKD1-213ENST00000480227 XIRP1Q702N8 1843 aaKnown RBP20.58■□□□□ 0.88
PKD1-213ENST00000480227 COL9A3Q14050 684 aaPredicted RBP20.58■□□□□ 0.88
PKD1-213ENST00000480227 NECTIN1Q15223 517 aa20.58■□□□□ 0.88
PKD1-213ENST00000480227 RBM8AQ9Y5S9 174 aaKnown RBP20.58■□□□□ 0.88
PKD1-213ENST00000480227 CPDO75976 1380 aa20.57■□□□□ 0.88
PKD1-213ENST00000480227 PTPN12Q05209 780 aaKnown RBP20.57■□□□□ 0.88
PKD1-213ENST00000480227 A0A087WZG4 1122 aa20.57■□□□□ 0.88
PKD1-213ENST00000480227 GADD45BO75293 160 aaPredicted RBP20.57■□□□□ 0.88
PKD1-213ENST00000480227 RFX5P48382 616 aaPredicted RBP20.57■□□□□ 0.88
PKD1-213ENST00000480227 LRSAM1Q6UWE0 723 aa20.57■□□□□ 0.88
PKD1-213ENST00000480227 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
PKD1-213ENST00000480227 NDUFB9Q9Y6M9 179 aa20.57■□□□□ 0.88
PKD1-213ENST00000480227 KCNJ4P48050 445 aa20.56■□□□□ 0.88
PKD1-213ENST00000480227 TPRNQ4KMQ1 711 aa20.56■□□□□ 0.88
PKD1-213ENST00000480227 USP48Q86UV5 1035 aa20.56■□□□□ 0.88
PKD1-213ENST00000480227 COPRSQ9NQ92 184 aa20.56■□□□□ 0.88
PKD1-213ENST00000480227 PDRG1Q9NUG6 133 aa20.56■□□□□ 0.88
PKD1-213ENST00000480227 TFCP2Q12800 502 aa20.56■□□□□ 0.88
PKD1-213ENST00000480227 CREB3L3Q68CJ9 461 aa20.56■□□□□ 0.88
PKD1-213ENST00000480227 PRDM11Q9NQV5 511 aa20.56■□□□□ 0.88
PKD1-213ENST00000480227 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
PKD1-213ENST00000480227 NBPF26B4DH59 902 aa20.55■□□□□ 0.88
PKD1-213ENST00000480227 NBPF14Q5TI25 921 aa20.55■□□□□ 0.88
PKD1-213ENST00000480227 NBPF10Q6P3W6 841 aaKnown RBP20.55■□□□□ 0.88
PKD1-213ENST00000480227 TOM1L2Q6ZVM7 507 aa20.55■□□□□ 0.88
PKD1-213ENST00000480227 CCDC83Q8IWF9 413 aa20.55■□□□□ 0.88
PKD1-213ENST00000480227 NBPF15Q8N660 670 aa20.55■□□□□ 0.88
PKD1-213ENST00000480227 ZSWIM6Q9HCJ5 1215 aa20.55■□□□□ 0.88
PKD1-213ENST00000480227 SMC3Q9UQE7 1217 aa20.55■□□□□ 0.88
PKD1-213ENST00000480227 LAMB4A4D0S4 1761 aa20.55■□□□□ 0.88
PKD1-213ENST00000480227 MAP4K1Q92918 833 aa20.54■□□□□ 0.88
PKD1-213ENST00000480227 KCNB2Q92953 911 aa20.54■□□□□ 0.88
PKD1-213ENST00000480227 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.54■□□□□ 0.88
PKD1-213ENST00000480227 CYP46A1Q9Y6A2 500 aa20.54■□□□□ 0.88
PKD1-213ENST00000480227 SYT1P21579 422 aa20.54■□□□□ 0.88
PKD1-213ENST00000480227 VPS53Q5VIR6 699 aa20.54■□□□□ 0.88
PKD1-213ENST00000480227 ZNF589Q86UQ0 364 aaPredicted RBP20.54■□□□□ 0.88
PKD1-213ENST00000480227 HIP1O00291 1037 aa20.53■□□□□ 0.88
PKD1-213ENST00000480227 RABL6Q3YEC7 729 aaPredicted RBP20.53■□□□□ 0.88
PKD1-213ENST00000480227 NAP1L5Q96NT1 182 aaPredicted RBP20.53■□□□□ 0.88
PKD1-213ENST00000480227 TAF6LQ9Y6J9 622 aa20.53■□□□□ 0.88
PKD1-213ENST00000480227 STX6O43752 255 aa20.53■□□□□ 0.88
PKD1-213ENST00000480227 ZKSCAN1P17029 563 aaPredicted RBP20.53■□□□□ 0.88
PKD1-213ENST00000480227 TNNI3KQ59H18 835 aa20.53■□□□□ 0.88
PKD1-213ENST00000480227 RNF214Q8ND24 703 aa20.53■□□□□ 0.88
PKD1-213ENST00000480227 PLBD2Q8NHP8 589 aa20.53■□□□□ 0.88
PKD1-213ENST00000480227 CNPY2Q9Y2B0 182 aa20.53■□□□□ 0.88
PKD1-213ENST00000480227 FPGT-TNNI3KV9GXZ4 949 aa20.53■□□□□ 0.88
PKD1-213ENST00000480227 CHGBP05060 677 aa20.52■□□□□ 0.88
PKD1-213ENST00000480227 ZSCAN22P10073 491 aaPredicted RBP20.52■□□□□ 0.88
PKD1-213ENST00000480227 CASP7P55210 303 aa20.52■□□□□ 0.88
PKD1-213ENST00000480227 TTLL7Q6ZT98 887 aa20.52■□□□□ 0.88
PKD1-213ENST00000480227 TM6SF1Q9BZW5 370 aa20.52■□□□□ 0.88
PKD1-213ENST00000480227 PARP4Q9UKK3 1724 aaKnown RBP20.52■□□□□ 0.88
PKD1-213ENST00000480227 WDR17Q8IZU2 1322 aa20.52■□□□□ 0.88
PKD1-213ENST00000480227 SLC27A2O14975 620 aa20.52■□□□□ 0.88
PKD1-213ENST00000480227 ZCRB1Q8TBF4 217 aaKnown RBP20.52■□□□□ 0.88
PKD1-213ENST00000480227 CCDC9Q9Y3X0 531 aaKnown RBP20.52■□□□□ 0.88
PKD1-213ENST00000480227 ST3GAL1Q11201 340 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 LMBR1LQ6UX01 489 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 TCEANC2Q96MN5 208 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 CHMP3Q9Y3E7 222 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 MED23Q9ULK4 1368 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 PCDH11XQ9BZA7 1347 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 PCDH11YQ9BZA8 1340 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 A1BGP04217 495 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 ME3Q16798 604 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 NECAB1Q8N987 351 aa20.51■□□□□ 0.87
PKD1-213ENST00000480227 PLEKHG2Q9H7P9 1386 aa20.5■□□□□ 0.87
PKD1-213ENST00000480227 GJB2P29033 226 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms