RNA–Protein interactions for RNA: ENST00000480045.5

LRP8-209, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 3,231 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-209ENST00000480045 ERCC4Q92889 916 aaPredicted RBP23.52■■□□□ 1.36
LRP8-209ENST00000480045 TTC21AQ8NDW8 1320 aa23.52■■□□□ 1.36
LRP8-209ENST00000480045 PNMA6AP0CW24 399 aaPredicted RBP23.52■■□□□ 1.35
LRP8-209ENST00000480045 CDC25BP30305 580 aa23.51■■□□□ 1.35
LRP8-209ENST00000480045 IQCB1Q15051 598 aa23.51■■□□□ 1.35
LRP8-209ENST00000480045 FEZ2Q9UHY8 353 aaPredicted RBP23.51■■□□□ 1.35
LRP8-209ENST00000480045 POGZQ7Z3K3 1410 aa23.51■■□□□ 1.35
LRP8-209ENST00000480045 CDK12Q9NYV4 1490 aaPredicted RBP23.51■■□□□ 1.35
LRP8-209ENST00000480045 SLC20A2Q08357 652 aa23.5■■□□□ 1.35
LRP8-209ENST00000480045 RUFY2Q8WXA3 655 aa23.5■■□□□ 1.35
LRP8-209ENST00000480045 MRFAP1L1Q96HT8 127 aa23.5■■□□□ 1.35
LRP8-209ENST00000480045 NEXMIFQ5QGS0 1516 aa23.5■■□□□ 1.35
LRP8-209ENST00000480045 FOSBP53539 338 aa23.5■■□□□ 1.35
LRP8-209ENST00000480045 RBM43Q6ZSC3 357 aaKnown RBP23.5■■□□□ 1.35
LRP8-209ENST00000480045 ZBTB9Q96C00 473 aa23.49■■□□□ 1.35
LRP8-209ENST00000480045 ZFP91Q96JP5 570 aaPredicted RBP23.49■■□□□ 1.35
LRP8-209ENST00000480045 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.49■■□□□ 1.35
LRP8-209ENST00000480045 H2AFXP16104 143 aaPredicted RBP23.49■■□□□ 1.35
LRP8-209ENST00000480045 HSP90AB2PQ58FF8 381 aa23.49■■□□□ 1.35
LRP8-209ENST00000480045 HOMER1Q86YM7 354 aa23.49■■□□□ 1.35
LRP8-209ENST00000480045 PLA2G4AP47712 749 aa23.48■■□□□ 1.35
LRP8-209ENST00000480045 TEX35Q5T0J7 233 aa23.48■■□□□ 1.35
LRP8-209ENST00000480045 RBM8AQ9Y5S9 174 aaKnown RBP23.48■■□□□ 1.35
LRP8-209ENST00000480045 RNF20Q5VTR2 975 aa23.48■■□□□ 1.35
LRP8-209ENST00000480045 SSH3Q8TE77 659 aa23.48■■□□□ 1.35
LRP8-209ENST00000480045 KIF20BQ96Q89 1820 aa23.47■■□□□ 1.35
LRP8-209ENST00000480045 TMCO3Q6UWJ1 677 aa23.47■■□□□ 1.35
LRP8-209ENST00000480045 ZCCHC17Q9NP64 241 aaKnown RBP23.47■■□□□ 1.35
LRP8-209ENST00000480045 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
LRP8-209ENST00000480045 CREB3L3Q68CJ9 461 aa23.46■■□□□ 1.35
LRP8-209ENST00000480045 SARM1Q6SZW1 724 aa23.46■■□□□ 1.35
LRP8-209ENST00000480045 H3BQV1 296 aa23.46■■□□□ 1.35
LRP8-209ENST00000480045 SEC31AO94979 1220 aaKnown RBP23.46■■□□□ 1.35
LRP8-209ENST00000480045 STX1AQ16623 288 aa23.46■■□□□ 1.35
LRP8-209ENST00000480045 IFFO2Q5TF58 517 aa23.46■■□□□ 1.35
LRP8-209ENST00000480045 AOPEPQ8N6M6 819 aa23.46■■□□□ 1.35
LRP8-209ENST00000480045 UBXN4Q92575 508 aa23.46■■□□□ 1.35
LRP8-209ENST00000480045 JAK2O60674 1132 aa23.45■■□□□ 1.34
LRP8-209ENST00000480045 KRBA2Q6ZNG9 492 aa23.45■■□□□ 1.34
LRP8-209ENST00000480045 CREBRFQ8IUR6 639 aa23.45■■□□□ 1.34
LRP8-209ENST00000480045 ARAP3Q8WWN8 1544 aa23.45■■□□□ 1.34
LRP8-209ENST00000480045 ST5P78524 1137 aa23.45■■□□□ 1.34
LRP8-209ENST00000480045 TM6SF1Q9BZW5 370 aa23.45■■□□□ 1.34
LRP8-209ENST00000480045 TSPYL1Q9H0U9 437 aa23.45■■□□□ 1.34
LRP8-209ENST00000480045 MTHFSDQ2M296 383 aaKnown RBP23.44■■□□□ 1.34
LRP8-209ENST00000480045 E4F1Q66K89 784 aaPredicted RBP23.44■■□□□ 1.34
LRP8-209ENST00000480045 KIF2AO00139 706 aaPredicted RBP23.44■■□□□ 1.34
LRP8-209ENST00000480045 BLOC1S2Q6QNY1 142 aa23.44■■□□□ 1.34
LRP8-209ENST00000480045 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.44■■□□□ 1.341e-6■■□□□ 14.3
LRP8-209ENST00000480045 GLRX3O76003 335 aaKnown RBP23.44■■□□□ 1.34
LRP8-209ENST00000480045 CAVIN2O95810 425 aa23.44■■□□□ 1.34
LRP8-209ENST00000480045 PPP1R13BQ96KQ4 1090 aa23.44■■□□□ 1.34
LRP8-209ENST00000480045 SMC2O95347 1197 aa23.43■■□□□ 1.34
LRP8-209ENST00000480045 FAM193AP78312 1265 aa23.43■■□□□ 1.34
LRP8-209ENST00000480045 FAM227BQ96M60 508 aa23.43■■□□□ 1.34
LRP8-209ENST00000480045 FMNL2Q96PY5 1086 aa23.43■■□□□ 1.34
LRP8-209ENST00000480045 FTOQ9C0B1 505 aaKnown RBP eCLIP23.43■■□□□ 1.345e-6■■■■■ 32.2
LRP8-209ENST00000480045 TMX1Q9H3N1 280 aa23.43■■□□□ 1.34
LRP8-209ENST00000480045 ARGLU1Q9NWB6 273 aaPredicted RBP23.43■■□□□ 1.34
LRP8-209ENST00000480045 NECTIN1Q15223 517 aa23.43■■□□□ 1.34
LRP8-209ENST00000480045 AATKQ6ZMQ8 1374 aa23.43■■□□□ 1.34
LRP8-209ENST00000480045 C10orf67Q8IYJ2 551 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 MNS1Q8NEH6 495 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 RSPH14Q9UHP6 348 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 DNAI1Q9UI46 699 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 TAF6LQ9Y6J9 622 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 CRB1P82279 1406 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 ATP7BP35670 1465 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 CCAR1Q8IX12 1150 aaKnown RBP23.42■■□□□ 1.34
LRP8-209ENST00000480045 TPM4P67936 248 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 BRF1Q92994 677 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 EPC1Q9H2F5 836 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 L2HGDHQ9H9P8 463 aa23.42■■□□□ 1.34
LRP8-209ENST00000480045 EDC4Q6P2E9 1401 aaKnown RBP23.41■■□□□ 1.34
LRP8-209ENST00000480045 TMC6Q7Z403 805 aa23.41■■□□□ 1.34
LRP8-209ENST00000480045 SMARCE1Q969G3 411 aa23.41■■□□□ 1.34
LRP8-209ENST00000480045 PHAXQ9H814 394 aaKnown RBP23.41■■□□□ 1.34
LRP8-209ENST00000480045 TTC21BQ7Z4L5 1316 aa23.41■■□□□ 1.34
LRP8-209ENST00000480045 KIDINS220Q9ULH0 1771 aa23.41■■□□□ 1.34
LRP8-209ENST00000480045 NBPF7P0C2Y1 421 aaPredicted RBP23.41■■□□□ 1.34
LRP8-209ENST00000480045 PSMA5P28066 241 aa23.41■■□□□ 1.34
LRP8-209ENST00000480045 CCDC34Q96HJ3 373 aa23.41■■□□□ 1.34
LRP8-209ENST00000480045 DHX40Q8IX18 779 aaKnown RBP23.4■■□□□ 1.34
LRP8-209ENST00000480045 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
LRP8-209ENST00000480045 SLC52A1Q9NWF4 448 aa23.4■■□□□ 1.34
LRP8-209ENST00000480045 KINO60870 393 aaKnown RBP23.4■■□□□ 1.34
LRP8-209ENST00000480045 PPFIA3O75145 1194 aa23.4■■□□□ 1.34
LRP8-209ENST00000480045 GSDMDP57764 484 aa23.4■■□□□ 1.34
LRP8-209ENST00000480045 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
LRP8-209ENST00000480045 SLC27A2O14975 620 aa23.39■■□□□ 1.34
LRP8-209ENST00000480045 TRIM66O15016 1216 aa23.39■■□□□ 1.34
LRP8-209ENST00000480045 CCDC73Q6ZRK6 1079 aa23.39■■□□□ 1.34
LRP8-209ENST00000480045 CEP57L1Q8IYX8 460 aa23.39■■□□□ 1.34
LRP8-209ENST00000480045 CLASRPQ8N2M8 674 aaKnown RBP23.39■■□□□ 1.34
LRP8-209ENST00000480045 URI1O94763 535 aaPredicted RBP23.39■■□□□ 1.33
LRP8-209ENST00000480045 IFIT2P09913 472 aaKnown RBP23.39■■□□□ 1.33
LRP8-209ENST00000480045 SFPQP23246 707 aaKnown RBP eCLIP23.39■■□□□ 1.33
LRP8-209ENST00000480045 GYS2P54840 703 aa23.38■■□□□ 1.33
LRP8-209ENST00000480045 FAM177A1Q8N128 213 aaPredicted RBP23.38■■□□□ 1.33
LRP8-209ENST00000480045 TXLNBQ8N3L3 684 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms