RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 CLTAP09496 248 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 RTF1Q92541 710 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 LRRFIP2Q9Y608 721 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 SCAF11Q99590 1463 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 RAB3GAP2Q9H2M9 1393 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 BIRC5O15392 142 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 PSMA5P28066 241 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 GNL2Q13823 731 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 SRCIN1Q9C0H9 1055 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 ZSCAN26Q16670 478 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 TEX11Q8IYF3 940 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 THUMPD2Q9BTF0 503 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 MRPL46Q9H2W6 279 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 MRPL11Q9Y3B7 192 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 ATXN2Q99700 1313 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 EIF3CLB5ME19 914 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 MYO1CO00159 1063 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 INPP5BP32019 993 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 SMC3Q9UQE7 1217 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 EFCAB8A8MWE9 144 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 STMN1P16949 149 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 RPGRIP1LQ68CZ1 1315 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 TSHZ1Q6ZSZ6 1077 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 STAMBPL1Q96FJ0 436 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 MRFAP1L1Q96HT8 127 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 TBC1D32Q96NH3 1257 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 GGA2Q9UJY4 613 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 ZNF777Q9ULD5 760 aaPredicted RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 G3BP1Q13283 466 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 CWC27Q6UX04 472 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 EXOC8Q8IYI6 725 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 FAM71BQ8TC56 605 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 RABGGTAQ92696 567 aa4.85□□□□□ -1.63
SCN2A-205ENST00000480032 API5Q9BZZ5 524 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 SEC63Q9UGP8 760 aaKnown RBP4.85□□□□□ -1.63
SCN2A-205ENST00000480032 MYZAPP0CAP1 466 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 EPS15P42566 896 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 CCDC158Q5M9N0 1113 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 ALDH3A1P30838 453 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 MRPS35P82673 323 aaKnown RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 GPRASP1Q5JY77 1395 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 TSPY2A6NKD2 308 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 LSM1O15116 133 aaKnown RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 USO1O60763 962 aaKnown RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 TSPY3P0CV98 308 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 TSPY8P0CW00 308 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 TSPY1Q01534 308 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 CTNNA3Q9UI47 895 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 RPL26L1Q9UNX3 145 aaKnown RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 LACTBP83111 547 aaPredicted RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 PHLDB3Q6NSJ2 640 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 CTNNBL1Q8WYA6 563 aaPredicted RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 MKL1Q969V6 931 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 CAPZA3Q96KX2 299 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 OLFM3Q96PB7 478 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 CARD10Q9BWT7 1032 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 TMCC1O94876 653 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 ZSCAN20P17040 1043 aaPredicted RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 GCKP35557 465 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 TPD52L1Q16890 204 aaPredicted RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 HDAC7Q8WUI4 952 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 TFIP11Q9UBB9 837 aaKnown RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 CCDC6Q16204 474 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 BBOF1Q8ND07 529 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 USP33Q8TEY7 942 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 ZCRB1Q8TBF4 217 aaKnown RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 DNAI1Q9UI46 699 aa4.84□□□□□ -1.63
SCN2A-205ENST00000480032 DDX41Q9UJV9 622 aaKnown RBP4.84□□□□□ -1.63
SCN2A-205ENST00000480032 TMED8Q6PL24 325 aaPredicted RBP4.84□□□□□ -1.64
SCN2A-205ENST00000480032 RUFY4Q6ZNE9 571 aa4.84□□□□□ -1.64
SCN2A-205ENST00000480032 CIDEBQ9UHD4 219 aa4.84□□□□□ -1.64
SCN2A-205ENST00000480032 LRRD1A4D1F6 860 aa4.84□□□□□ -1.64
SCN2A-205ENST00000480032 UBE2HP62256 183 aa4.84□□□□□ -1.64
SCN2A-205ENST00000480032 IFT81Q8WYA0 676 aa4.84□□□□□ -1.64
SCN2A-205ENST00000480032 JADE2Q9NQC1 790 aa4.84□□□□□ -1.64
SCN2A-205ENST00000480032 NAP1L4Q99733 375 aaKnown RBP4.83□□□□□ -1.64
SCN2A-205ENST00000480032 IKBKGQ9Y6K9 419 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 LRPPRCP42704 1394 aaKnown RBP4.83□□□□□ -1.64
SCN2A-205ENST00000480032 PSDA5PKW4 1024 aaPredicted RBP4.83□□□□□ -1.64
SCN2A-205ENST00000480032 IPO5O00410 1097 aaKnown RBP4.83□□□□□ -1.64
SCN2A-205ENST00000480032 VCAM1P19320 739 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 COPB2P35606 906 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 ARHGAP29Q52LW3 1261 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 IQUBQ8NA54 791 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 ACADVLP49748 655 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 MAP3K11Q16584 847 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 KIF2CQ99661 725 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 FERP16591 822 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 WASHC4Q2M389 1173 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 PRR23CQ6ZRP0 262 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 SMARCC2Q8TAQ2 1214 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 PPP1R12CQ9BZL4 782 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 TAOK3Q9H2K8 898 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 ANO10Q9NW15 660 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 ATP2B1P20020 1258 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 NBPF15Q8N660 670 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 ANKRD24Q8TF21 1146 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 TRIM7Q9C029 511 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 MMRN2Q9H8L6 949 aa4.83□□□□□ -1.64
SCN2A-205ENST00000480032 PPP1R9AQ9ULJ8 1098 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms