RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 USP48Q86UV5 1035 aa12.96□□□□□ -0.33
CHD6-208ENST00000480022 SPC24Q8NBT2 197 aa12.96□□□□□ -0.33
CHD6-208ENST00000480022 YY1AP1Q9H869 796 aa12.96□□□□□ -0.33
CHD6-208ENST00000480022 MEGF6O75095 1541 aa12.96□□□□□ -0.34
CHD6-208ENST00000480022 MX1P20591 662 aa12.96□□□□□ -0.34
CHD6-208ENST00000480022 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.34
CHD6-208ENST00000480022 C16orf45Q96MC5 204 aaPredicted RBP12.96□□□□□ -0.34
CHD6-208ENST00000480022 GDPD2Q9HCC8 539 aa12.96□□□□□ -0.34
CHD6-208ENST00000480022 TNNT1P13805 278 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 IL2RBP14784 551 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 TMX3Q96JJ7 454 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 SMARCA5O60264 1052 aaPredicted RBP12.95□□□□□ -0.34
CHD6-208ENST00000480022 CYP2C19P33261 490 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 TNNT3P45378 269 aaPredicted RBP12.95□□□□□ -0.34
CHD6-208ENST00000480022 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
CHD6-208ENST00000480022 KMT5BQ4FZB7 885 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 DISP2A7MBM2 1401 aa12.95□□□□□ -0.34
CHD6-208ENST00000480022 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
CHD6-208ENST00000480022 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
CHD6-208ENST00000480022 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
CHD6-208ENST00000480022 AP5Z1O43299 807 aa12.94□□□□□ -0.34
CHD6-208ENST00000480022 MCM2P49736 904 aa12.94□□□□□ -0.34
CHD6-208ENST00000480022 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
CHD6-208ENST00000480022 GLI3P10071 1580 aa12.94□□□□□ -0.34
CHD6-208ENST00000480022 REC8O95072 547 aa12.94□□□□□ -0.34
CHD6-208ENST00000480022 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
CHD6-208ENST00000480022 RAD51AP2Q09MP3 1159 aa12.93□□□□□ -0.34
CHD6-208ENST00000480022 CUL4AQ13619 759 aa12.93□□□□□ -0.34
CHD6-208ENST00000480022 FOXD4L6Q3SYB3 417 aaPredicted RBP12.93□□□□□ -0.34
CHD6-208ENST00000480022 FOXD4L3Q6VB84 417 aaPredicted RBP12.93□□□□□ -0.34
CHD6-208ENST00000480022 IFT57Q9NWB7 429 aa12.93□□□□□ -0.34
CHD6-208ENST00000480022 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
CHD6-208ENST00000480022 PTGS1P23219 599 aa12.93□□□□□ -0.34
CHD6-208ENST00000480022 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
CHD6-208ENST00000480022 POTEAQ6S8J7 498 aa12.93□□□□□ -0.34
CHD6-208ENST00000480022 TMEM87AQ8NBN3 555 aa12.93□□□□□ -0.34
CHD6-208ENST00000480022 GEMIN8Q9NWZ8 242 aaKnown RBP12.93□□□□□ -0.34
CHD6-208ENST00000480022 INTS4Q96HW7 963 aaKnown RBP12.92□□□□□ -0.34
CHD6-208ENST00000480022 NEK4P51957 841 aa12.92□□□□□ -0.34
CHD6-208ENST00000480022 RBM6P78332 1123 aaKnown RBP12.92□□□□□ -0.34
CHD6-208ENST00000480022 MTHFSDQ2M296 383 aaKnown RBP12.92□□□□□ -0.34
CHD6-208ENST00000480022 SIRT2Q8IXJ6 389 aa12.92□□□□□ -0.34
CHD6-208ENST00000480022 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
CHD6-208ENST00000480022 FUCA2Q9BTY2 467 aa12.92□□□□□ -0.34
CHD6-208ENST00000480022 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
CHD6-208ENST00000480022 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
CHD6-208ENST00000480022 ZBTB9Q96C00 473 aa12.91□□□□□ -0.34
CHD6-208ENST00000480022 ST7Q9NRC1 585 aa12.91□□□□□ -0.34
CHD6-208ENST00000480022 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
CHD6-208ENST00000480022 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
CHD6-208ENST00000480022 PLEKHO1Q53GL0 409 aaPredicted RBP12.91□□□□□ -0.34
CHD6-208ENST00000480022 KCNG1Q9UIX4 513 aa12.91□□□□□ -0.34
CHD6-208ENST00000480022 IL16Q14005 1332 aa12.91□□□□□ -0.34
CHD6-208ENST00000480022 WDR33Q9C0J8 1336 aaKnown RBP12.91□□□□□ -0.34
CHD6-208ENST00000480022 SLFNL1Q499Z3 407 aa12.9□□□□□ -0.34
CHD6-208ENST00000480022 ZCRB1Q8TBF4 217 aaKnown RBP12.9□□□□□ -0.34
CHD6-208ENST00000480022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.342e-7■■■■□ 23.6
CHD6-208ENST00000480022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
CHD6-208ENST00000480022 RXRBP28702 533 aa12.9□□□□□ -0.34
CHD6-208ENST00000480022 FBXO38Q6PIJ6 1188 aa12.9□□□□□ -0.34
CHD6-208ENST00000480022 TMED8Q6PL24 325 aaPredicted RBP12.9□□□□□ -0.34
CHD6-208ENST00000480022 RSPH14Q9UHP6 348 aa12.9□□□□□ -0.34
CHD6-208ENST00000480022 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
CHD6-208ENST00000480022 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
CHD6-208ENST00000480022 MMP14P50281 582 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 UBE2HP62256 183 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 RASSF4Q9H2L5 321 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 TCHHQ07283 1943 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 A0A0G2JS52 829 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 EXOC5O00471 708 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 TPD52L1Q16890 204 aaPredicted RBP12.89□□□□□ -0.35
CHD6-208ENST00000480022 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.89□□□□□ -0.35
CHD6-208ENST00000480022 SDSP20132 328 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 NFE2L2Q16236 605 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 DDB1Q16531 1140 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 CEP135Q66GS9 1140 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 CCDC186Q7Z3E2 898 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 TRIM35Q9UPQ4 493 aa12.89□□□□□ -0.35
CHD6-208ENST00000480022 ERC2O15083 957 aa12.88□□□□□ -0.35
CHD6-208ENST00000480022 TMPOP42166 694 aaKnown RBP12.88□□□□□ -0.35
CHD6-208ENST00000480022 BMS1Q14692 1282 aaKnown RBP12.88□□□□□ -0.35
CHD6-208ENST00000480022 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
CHD6-208ENST00000480022 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
CHD6-208ENST00000480022 PLCD4Q9BRC7 762 aa12.88□□□□□ -0.35
CHD6-208ENST00000480022 ZNF215Q9UL58 517 aaPredicted RBP12.88□□□□□ -0.35
CHD6-208ENST00000480022 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
CHD6-208ENST00000480022 TNS2Q63HR2 1409 aa12.88□□□□□ -0.35
CHD6-208ENST00000480022 CYP27B1O15528 508 aa12.88□□□□□ -0.35
CHD6-208ENST00000480022 LRMPQ12912 555 aa12.88□□□□□ -0.35
CHD6-208ENST00000480022 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
CHD6-208ENST00000480022 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
CHD6-208ENST00000480022 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
CHD6-208ENST00000480022 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms