RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 FAM182BQ5T319 152 aa9.95□□□□□ -0.82
CCDC58-204ENST00000479414 TUT1Q9H6E5 874 aaKnown RBP9.95□□□□□ -0.82
CCDC58-204ENST00000479414 STRN4Q9NRL3 753 aa9.95□□□□□ -0.82
CCDC58-204ENST00000479414 ZAP70P43403 619 aa9.94□□□□□ -0.82
CCDC58-204ENST00000479414 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
CCDC58-204ENST00000479414 ECM1Q16610 540 aa9.94□□□□□ -0.82
CCDC58-204ENST00000479414 NOM1Q5C9Z4 860 aaKnown RBP9.94□□□□□ -0.82
CCDC58-204ENST00000479414 RNFT1Q5M7Z0 435 aa9.94□□□□□ -0.82
CCDC58-204ENST00000479414 ALKBH2Q6NS38 261 aa9.94□□□□□ -0.82
CCDC58-204ENST00000479414 MARK1Q9P0L2 795 aa9.94□□□□□ -0.82
CCDC58-204ENST00000479414 KCNH4Q9UQ05 1017 aa9.94□□□□□ -0.82
CCDC58-204ENST00000479414 EPB42P16452 691 aa9.93□□□□□ -0.82
CCDC58-204ENST00000479414 MX2P20592 715 aa9.93□□□□□ -0.82
CCDC58-204ENST00000479414 GRNP28799 593 aaKnown RBP9.93□□□□□ -0.82
CCDC58-204ENST00000479414 GMPRP36959 345 aa9.93□□□□□ -0.82
CCDC58-204ENST00000479414 EIF1AXP47813 144 aaKnown RBP9.93□□□□□ -0.82
CCDC58-204ENST00000479414 KRT76Q01546 638 aa9.93□□□□□ -0.82
CCDC58-204ENST00000479414 GLYCTKQ8IVS8 523 aa9.93□□□□□ -0.82
CCDC58-204ENST00000479414 C11orf16Q9NQ32 467 aa9.93□□□□□ -0.82
CCDC58-204ENST00000479414 MBIPQ9NS73 344 aa9.93□□□□□ -0.82
CCDC58-204ENST00000479414 FAM13BQ9NYF5 915 aa9.93□□□□□ -0.82
CCDC58-204ENST00000479414 CD33P20138 364 aa9.92□□□□□ -0.82
CCDC58-204ENST00000479414 CTBSQ01459 385 aa9.92□□□□□ -0.82
CCDC58-204ENST00000479414 RTCBQ9Y3I0 505 aaKnown RBP9.91□□□□□ -0.82
CCDC58-204ENST00000479414 C2CD2LO14523 706 aa9.9□□□□□ -0.82
CCDC58-204ENST00000479414 ARHGAP4P98171 946 aa9.9□□□□□ -0.82
CCDC58-204ENST00000479414 ATCAYQ86WG3 371 aa9.9□□□□□ -0.82
CCDC58-204ENST00000479414 CNTNAP3BQ96NU0 1288 aa9.9□□□□□ -0.82
CCDC58-204ENST00000479414 CNTNAP3Q9BZ76 1288 aa9.9□□□□□ -0.82
CCDC58-204ENST00000479414 NSFL1CQ9UNZ2 370 aaKnown RBP9.9□□□□□ -0.82
CCDC58-204ENST00000479414 SRSF11Q05519 484 aaKnown RBP9.89□□□□□ -0.83
CCDC58-204ENST00000479414 RGL4Q8IZJ4 473 aa9.89□□□□□ -0.83
CCDC58-204ENST00000479414 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
CCDC58-204ENST00000479414 FZD6O60353 706 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 BMP4P12644 408 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 MZF1P28698 734 aaPredicted RBP9.88□□□□□ -0.83
CCDC58-204ENST00000479414 MAP2K3P46734 347 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 SPEM2Q0P670 501 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 GRIN2CQ14957 1233 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 GPR152Q8TDT2 470 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 USP20Q9Y2K6 914 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 KCNMB2Q9Y691 235 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 IGF1RP08069 1367 aa9.88□□□□□ -0.83
CCDC58-204ENST00000479414 EGFRP00533 1210 aa9.87□□□□□ -0.83
CCDC58-204ENST00000479414 EDEM1Q92611 657 aa9.87□□□□□ -0.83
CCDC58-204ENST00000479414 SLC30A3Q99726 388 aa9.87□□□□□ -0.83
CCDC58-204ENST00000479414 GSX2Q9BZM3 304 aa9.87□□□□□ -0.83
CCDC58-204ENST00000479414 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
CCDC58-204ENST00000479414 WIPF1O43516 503 aa9.86□□□□□ -0.83
CCDC58-204ENST00000479414 SLURP2P0DP57 97 aa9.86□□□□□ -0.83
CCDC58-204ENST00000479414 CCINQ13939 588 aa9.86□□□□□ -0.83
CCDC58-204ENST00000479414 CMTR1Q8N1G2 835 aaKnown RBP9.86□□□□□ -0.83
CCDC58-204ENST00000479414 AVENQ9NQS1 362 aaPredicted RBP9.86□□□□□ -0.83
CCDC58-204ENST00000479414 ADAMTS2O95450 1211 aa9.85□□□□□ -0.83
CCDC58-204ENST00000479414 PDGFAP04085 211 aa9.85□□□□□ -0.83
CCDC58-204ENST00000479414 RPLP1P05386 114 aaKnown RBP9.85□□□□□ -0.83
CCDC58-204ENST00000479414 DNM1Q05193 864 aaKnown RBP9.85□□□□□ -0.83
CCDC58-204ENST00000479414 TRIP4Q15650 581 aaPredicted RBP9.85□□□□□ -0.83
CCDC58-204ENST00000479414 ZNF468Q5VIY5 522 aaPredicted RBP9.85□□□□□ -0.83
CCDC58-204ENST00000479414 ZBTB7CA1YPR0 619 aa9.84□□□□□ -0.83
CCDC58-204ENST00000479414 XYLBO75191 536 aa9.84□□□□□ -0.83
CCDC58-204ENST00000479414 ARAFP10398 606 aa9.84□□□□□ -0.83
CCDC58-204ENST00000479414 AAMPQ13685 434 aa9.84□□□□□ -0.83
CCDC58-204ENST00000479414 SND1Q7KZF4 910 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC58-204ENST00000479414 NUDT16Q96DE0 195 aaKnown RBP9.84□□□□□ -0.83
CCDC58-204ENST00000479414 CCDC87Q9NVE4 849 aa9.84□□□□□ -0.83
CCDC58-204ENST00000479414 BIN2Q9UBW5 565 aaPredicted RBP9.84□□□□□ -0.83
CCDC58-204ENST00000479414 PRR12Q9ULL5 1215 aa9.84□□□□□ -0.83
CCDC58-204ENST00000479414 POLIQ9UNA4 740 aa9.84□□□□□ -0.83
CCDC58-204ENST00000479414 PCSK2P16519 638 aa9.83□□□□□ -0.84
CCDC58-204ENST00000479414 USP5P45974 858 aa9.83□□□□□ -0.84
CCDC58-204ENST00000479414 NEUROD1Q13562 356 aa9.83□□□□□ -0.84
CCDC58-204ENST00000479414 FNDC3AQ9Y2H6 1198 aaKnown RBP9.83□□□□□ -0.84
CCDC58-204ENST00000479414 BRPF3Q9ULD4 1205 aa9.82□□□□□ -0.84
CCDC58-204ENST00000479414 UBAP1LF5GYI3 381 aa9.81□□□□□ -0.84
CCDC58-204ENST00000479414 NDUFB5O43674 189 aa9.81□□□□□ -0.84
CCDC58-204ENST00000479414 MAP3K6O95382 1288 aa9.81□□□□□ -0.84
CCDC58-204ENST00000479414 GJD3Q8N144 294 aa9.81□□□□□ -0.84
CCDC58-204ENST00000479414 ACDQ96AP0 544 aa9.81□□□□□ -0.84
CCDC58-204ENST00000479414 CITED4Q96RK1 184 aa9.81□□□□□ -0.84
CCDC58-204ENST00000479414 OXCT2Q9BYC2 517 aaPredicted RBP9.81□□□□□ -0.84
CCDC58-204ENST00000479414 GZF1Q9H116 711 aaPredicted RBP9.81□□□□□ -0.84
CCDC58-204ENST00000479414 KLF15Q9UIH9 416 aa9.81□□□□□ -0.84
CCDC58-204ENST00000479414 GDF2Q9UK05 429 aaPredicted RBP9.81□□□□□ -0.84
CCDC58-204ENST00000479414 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.81□□□□□ -0.84
CCDC58-204ENST00000479414 SIN3BO75182 1162 aa9.8□□□□□ -0.84
CCDC58-204ENST00000479414 ADH6P28332 368 aa9.8□□□□□ -0.84
CCDC58-204ENST00000479414 PDE12Q6L8Q7 609 aaKnown RBP9.8□□□□□ -0.84
CCDC58-204ENST00000479414 RAB44Q7Z6P3 723 aaPredicted RBP9.8□□□□□ -0.84
CCDC58-204ENST00000479414 SYT9Q86SS6 491 aa9.8□□□□□ -0.84
CCDC58-204ENST00000479414 GOLGA6L1Q8N7Z2 621 aa9.8□□□□□ -0.84
CCDC58-204ENST00000479414 BHMTQ93088 406 aa9.8□□□□□ -0.84
CCDC58-204ENST00000479414 PNMA5Q96PV4 448 aa9.8□□□□□ -0.84
CCDC58-204ENST00000479414 GGNBP2Q9H3C7 697 aa9.8□□□□□ -0.84
CCDC58-204ENST00000479414 SASH3O75995 380 aa9.79□□□□□ -0.84
CCDC58-204ENST00000479414 NFKB1P19838 968 aa9.79□□□□□ -0.84
CCDC58-204ENST00000479414 XKR5Q6UX68 686 aa9.79□□□□□ -0.84
CCDC58-204ENST00000479414 SLCO4C1Q6ZQN7 724 aa9.79□□□□□ -0.84
CCDC58-204ENST00000479414 NLRP13Q86W25 1043 aa9.79□□□□□ -0.84
CCDC58-204ENST00000479414 RBCK1Q9BYM8 510 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms