RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 PRPF40BQ6NWY9 871 aaKnown RBP26.67■■□□□ 1.86
PKP4-209ENST00000479398 STK31Q9BXU1 1019 aa26.67■■□□□ 1.86
PKP4-209ENST00000479398 MYH16Q9H6N6 1097 aa26.67■■□□□ 1.86
PKP4-209ENST00000479398 ZNF219Q9P2Y4 722 aaPredicted RBP26.67■■□□□ 1.86
PKP4-209ENST00000479398 SLX4Q8IY92 1834 aa26.67■■□□□ 1.86
PKP4-209ENST00000479398 ZNF521Q96K83 1311 aa26.66■■□□□ 1.86
PKP4-209ENST00000479398 TCERG1O14776 1098 aaKnown RBP26.66■■□□□ 1.86
PKP4-209ENST00000479398 VAMP4O75379 141 aa26.66■■□□□ 1.86
PKP4-209ENST00000479398 ALDH1B1P30837 517 aa26.66■■□□□ 1.86
PKP4-209ENST00000479398 C9orf131Q5VYM1 1079 aa26.66■■□□□ 1.86
PKP4-209ENST00000479398 ADCY9O60503 1353 aa26.66■■□□□ 1.86
PKP4-209ENST00000479398 RNF123Q5XPI4 1314 aa26.65■■□□□ 1.86
PKP4-209ENST00000479398 ATP5J2-PTCD1G3V325 749 aa26.65■■□□□ 1.86
PKP4-209ENST00000479398 TRMT112Q9UI30 125 aaKnown RBP26.65■■□□□ 1.86
PKP4-209ENST00000479398 SBF1O95248 1867 aa26.65■■□□□ 1.86
PKP4-209ENST00000479398 RIC1Q4ADV7 1423 aa26.65■■□□□ 1.86
PKP4-209ENST00000479398 DDX58O95786 925 aaKnown RBP26.64■■□□□ 1.86
PKP4-209ENST00000479398 TRIM28Q13263 835 aaKnown RBP26.64■■□□□ 1.86
PKP4-209ENST00000479398 NLRP3Q96P20 1036 aa26.64■■□□□ 1.86
PKP4-209ENST00000479398 SLC4A2P04920 1241 aa26.63■■□□□ 1.85
PKP4-209ENST00000479398 SYNE4Q8N205 404 aa26.63■■□□□ 1.85
PKP4-209ENST00000479398 C7orf43Q8WVR3 580 aa26.63■■□□□ 1.85
PKP4-209ENST00000479398 CACNA1SQ13698 1873 aa26.63■■□□□ 1.85
PKP4-209ENST00000479398 HOXA10P31260 410 aaPredicted RBP26.62■■□□□ 1.85
PKP4-209ENST00000479398 RASSF7Q02833 373 aa26.62■■□□□ 1.85
PKP4-209ENST00000479398 MIER1Q8N108 512 aa26.62■■□□□ 1.85
PKP4-209ENST00000479398 RPGRQ92834 1020 aaKnown RBP26.62■■□□□ 1.85
PKP4-209ENST00000479398 SH3TC1Q8TE82 1336 aa26.62■■□□□ 1.85
PKP4-209ENST00000479398 TNRC6CQ9HCJ0 1690 aaKnown RBP26.61■■□□□ 1.85
PKP4-209ENST00000479398 SOGA3Q5TF21 947 aa26.61■■□□□ 1.85
PKP4-209ENST00000479398 ZNF428Q96B54 188 aa26.61■■□□□ 1.85
PKP4-209ENST00000479398 RNF181Q9P0P0 153 aa26.61■■□□□ 1.85
PKP4-209ENST00000479398 ARFGEF2Q9Y6D5 1785 aa26.61■■□□□ 1.85
PKP4-209ENST00000479398 NFKBIEO00221 500 aa26.6■■□□□ 1.85
PKP4-209ENST00000479398 KSR2Q6VAB6 950 aa26.6■■□□□ 1.85
PKP4-209ENST00000479398 C3orf67Q6ZVT6 689 aa26.6■■□□□ 1.85
PKP4-209ENST00000479398 G2E3Q7L622 706 aa26.6■■□□□ 1.85
PKP4-209ENST00000479398 HCLS1P14317 486 aaPredicted RBP26.59■■□□□ 1.85
PKP4-209ENST00000479398 LMNB1P20700 586 aa26.59■■□□□ 1.85
PKP4-209ENST00000479398 PRELPP51888 382 aa26.59■■□□□ 1.85
PKP4-209ENST00000479398 RBM17Q96I25 401 aaKnown RBP26.59■■□□□ 1.85
PKP4-209ENST00000479398 CRAMP1Q96RY5 1269 aa26.59■■□□□ 1.85
PKP4-209ENST00000479398 MYD88Q99836 296 aa26.59■■□□□ 1.85
PKP4-209ENST00000479398 METTL22Q9BUU2 404 aaPredicted RBP26.59■■□□□ 1.85
PKP4-209ENST00000479398 CACNA1FO60840 1977 aa26.58■■□□□ 1.85
PKP4-209ENST00000479398 CCDC88AQ3V6T2 1871 aa26.58■■□□□ 1.85
PKP4-209ENST00000479398 PI4KAP2A4QPH2 592 aa26.58■■□□□ 1.85
PKP4-209ENST00000479398 PI4KAP1Q8N8J0 262 aa26.58■■□□□ 1.85
PKP4-209ENST00000479398 ZNF526Q8TF50 670 aaPredicted RBP26.58■■□□□ 1.85
PKP4-209ENST00000479398 FAM89AQ96GI7 184 aa26.58■■□□□ 1.85
PKP4-209ENST00000479398 GPBP1L1Q9HC44 474 aaPredicted RBP26.58■■□□□ 1.85
PKP4-209ENST00000479398 MAP3K2Q9Y2U5 619 aa26.58■■□□□ 1.85
PKP4-209ENST00000479398 FER1L6Q2WGJ9 1857 aa26.57■■□□□ 1.84
PKP4-209ENST00000479398 CCDC93Q567U6 631 aa26.56■■□□□ 1.84
PKP4-209ENST00000479398 CCDC191Q8NCU4 936 aa26.56■■□□□ 1.84
PKP4-209ENST00000479398 LTBP3Q9NS15 1303 aa26.55■■□□□ 1.84
PKP4-209ENST00000479398 E9PSI1 815 aa26.54■■□□□ 1.84
PKP4-209ENST00000479398 FLIIQ13045 1269 aa26.54■■□□□ 1.84
PKP4-209ENST00000479398 OLFM4Q6UX06 510 aa26.54■■□□□ 1.84
PKP4-209ENST00000479398 ZBTB38Q8NAP3 1195 aaPredicted RBP26.54■■□□□ 1.84
PKP4-209ENST00000479398 TAOK3Q9H2K8 898 aa26.54■■□□□ 1.84
PKP4-209ENST00000479398 SLFN5Q08AF3 891 aa26.53■■□□□ 1.84
PKP4-209ENST00000479398 RTL5Q5HYW3 569 aaPredicted RBP26.53■■□□□ 1.84
PKP4-209ENST00000479398 RTKN2Q8IZC4 609 aa26.53■■□□□ 1.84
PKP4-209ENST00000479398 CC2D2BQ6DHV5 1058 aa26.52■■□□□ 1.84
PKP4-209ENST00000479398 CWC25Q9NXE8 425 aaPredicted RBP26.52■■□□□ 1.84
PKP4-209ENST00000479398 IRS4O14654 1257 aaPredicted RBP26.51■■□□□ 1.83
PKP4-209ENST00000479398 LAMB2P55268 1798 aa26.51■■□□□ 1.83
PKP4-209ENST00000479398 ZC3H4Q9UPT8 1303 aaKnown RBP26.5■■□□□ 1.83
PKP4-209ENST00000479398 NEXNQ0ZGT2 675 aa26.5■■□□□ 1.83
PKP4-209ENST00000479398 FKBP5Q13451 457 aaPredicted RBP26.5■■□□□ 1.83
PKP4-209ENST00000479398 SF3B3Q15393 1217 aaKnown RBP26.5■■□□□ 1.83
PKP4-209ENST00000479398 BBOX1O75936 387 aa26.49■■□□□ 1.83
PKP4-209ENST00000479398 PCCAP05165 728 aaPredicted RBP26.49■■□□□ 1.83
PKP4-209ENST00000479398 IGKV5-2P06315 115 aa26.49■■□□□ 1.83
PKP4-209ENST00000479398 FKBP4Q02790 459 aaKnown RBP eCLIP26.49■■□□□ 1.83
PKP4-209ENST00000479398 DDX46Q7L014 1031 aaKnown RBP26.49■■□□□ 1.83
PKP4-209ENST00000479398 CDCA7LQ96GN5 454 aa26.49■■□□□ 1.83
PKP4-209ENST00000479398 ABCC4O15439 1325 aa26.48■■□□□ 1.83
PKP4-209ENST00000479398 PPEF1O14829 653 aaPredicted RBP26.48■■□□□ 1.83
PKP4-209ENST00000479398 DDX60Q8IY21 1712 aaKnown RBP26.48■■□□□ 1.83
PKP4-209ENST00000479398 DICER1Q9UPY3 1922 aaKnown RBP26.47■■□□□ 1.83
PKP4-209ENST00000479398 HSP90B1P14625 803 aaKnown RBP26.47■■□□□ 1.83
PKP4-209ENST00000479398 GRIPAP1Q4V328 841 aa26.47■■□□□ 1.83
PKP4-209ENST00000479398 TRMT2AQ8IZ69 625 aaKnown RBP26.47■■□□□ 1.83
PKP4-209ENST00000479398 JARID2Q92833 1246 aaPredicted RBP26.47■■□□□ 1.83
PKP4-209ENST00000479398 DNAAF4Q8WXU2 420 aa26.46■■□□□ 1.83
PKP4-209ENST00000479398 ATP6V0A2Q9Y487 856 aa26.46■■□□□ 1.83
PKP4-209ENST00000479398 KDM2BQ8NHM5 1336 aa26.45■■□□□ 1.83
PKP4-209ENST00000479398 NEURL1BA8MQ27 555 aa26.45■■□□□ 1.82
PKP4-209ENST00000479398 GRAPQ13588 217 aa26.45■■□□□ 1.82
PKP4-209ENST00000479398 CWF19L2Q2TBE0 894 aaKnown RBP26.45■■□□□ 1.82
PKP4-209ENST00000479398 GRAPLQ8TC17 118 aaPredicted RBP26.45■■□□□ 1.82
PKP4-209ENST00000479398 TMX4Q9H1E5 349 aaPredicted RBP26.45■■□□□ 1.82
PKP4-209ENST00000479398 SP8Q8IXZ3 490 aa26.44■■□□□ 1.82
PKP4-209ENST00000479398 PSMD1Q99460 953 aa26.44■■□□□ 1.82
PKP4-209ENST00000479398 ZNF277Q9NRM2 450 aaPredicted RBP26.44■■□□□ 1.82
PKP4-209ENST00000479398 TAF1P21675 1872 aa26.43■■□□□ 1.82
PKP4-209ENST00000479398 SNED1Q8TER0 1413 aa26.43■■□□□ 1.82
PKP4-209ENST00000479398 GLTPD2A6NH11 291 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms