RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 ARHGAP45Q92619 1136 aa17.77■□□□□ 0.44
PCIF1-202ENST00000479348 IPO8O15397 1037 aaKnown RBP17.76■□□□□ 0.43
PCIF1-202ENST00000479348 CWC25Q9NXE8 425 aaPredicted RBP17.76■□□□□ 0.43
PCIF1-202ENST00000479348 TRMT112Q9UI30 125 aaKnown RBP17.76■□□□□ 0.43
PCIF1-202ENST00000479348 IGKV5-2P06315 115 aa17.75■□□□□ 0.43
PCIF1-202ENST00000479348 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
PCIF1-202ENST00000479348 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
PCIF1-202ENST00000479348 NOB1Q9ULX3 412 aaKnown RBP17.75■□□□□ 0.43
PCIF1-202ENST00000479348 RIC1Q4ADV7 1423 aa17.75■□□□□ 0.43
PCIF1-202ENST00000479348 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
PCIF1-202ENST00000479348 NEURL1BA8MQ27 555 aa17.74■□□□□ 0.43
PCIF1-202ENST00000479348 F6X3S4 739 aa17.74■□□□□ 0.43
PCIF1-202ENST00000479348 HSP90B1P14625 803 aaKnown RBP17.74■□□□□ 0.43
PCIF1-202ENST00000479348 ERFEQ4G0M1 354 aa17.74■□□□□ 0.43
PCIF1-202ENST00000479348 ZBTB38Q8NAP3 1195 aaPredicted RBP17.74■□□□□ 0.43
PCIF1-202ENST00000479348 KLRG2A4D1S0 409 aaPredicted RBP17.73■□□□□ 0.43
PCIF1-202ENST00000479348 H0YIN7 160 aa17.73■□□□□ 0.43
PCIF1-202ENST00000479348 BCAR3O75815 825 aa17.73■□□□□ 0.43
PCIF1-202ENST00000479348 PCCAP05165 728 aaPredicted RBP17.73■□□□□ 0.43
PCIF1-202ENST00000479348 BEND3Q5T5X7 828 aa17.73■□□□□ 0.43
PCIF1-202ENST00000479348 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
PCIF1-202ENST00000479348 NLGN2Q8NFZ4 835 aa17.73■□□□□ 0.43
PCIF1-202ENST00000479348 PXDNLA1KZ92 1463 aa17.73■□□□□ 0.43
PCIF1-202ENST00000479348 ALDH1L1O75891 902 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 CWF19L2Q2TBE0 894 aaKnown RBP17.72■□□□□ 0.43
PCIF1-202ENST00000479348 SRCIN1Q9C0H9 1055 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 RCAN3Q9UKA8 241 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 A0A0G2JLW4 131 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 DPEP1P16444 411 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 GCKRQ14397 625 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 SLC4A10Q6U841 1118 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 FAM89AQ96GI7 184 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 NLRP3Q96P20 1036 aa17.72■□□□□ 0.43
PCIF1-202ENST00000479348 KCNA3P22001 575 aa17.71■□□□□ 0.42
PCIF1-202ENST00000479348 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.42
PCIF1-202ENST00000479348 PIM2Q9P1W9 311 aa17.71■□□□□ 0.42
PCIF1-202ENST00000479348 ABCC12Q96J65 1359 aa17.7■□□□□ 0.42
PCIF1-202ENST00000479348 H7C1W4 665 aa17.7■□□□□ 0.42
PCIF1-202ENST00000479348 SRGNP10124 158 aa17.7■□□□□ 0.42
PCIF1-202ENST00000479348 CCT4P50991 539 aaKnown RBP17.7■□□□□ 0.42
PCIF1-202ENST00000479348 CRY2Q49AN0 593 aa17.7■□□□□ 0.42
PCIF1-202ENST00000479348 ZKSCAN2Q63HK3 967 aa17.7■□□□□ 0.42
PCIF1-202ENST00000479348 ATF7IPQ6VMQ6 1270 aa17.7■□□□□ 0.42
PCIF1-202ENST00000479348 FRAT1Q92837 279 aaPredicted RBP17.7■□□□□ 0.42
PCIF1-202ENST00000479348 CDHR2Q9BYE9 1310 aa17.69■□□□□ 0.42
PCIF1-202ENST00000479348 ANKRD31Q8N7Z5 1873 aa17.69■□□□□ 0.42
PCIF1-202ENST00000479348 IRS4O14654 1257 aaPredicted RBP17.69■□□□□ 0.42
PCIF1-202ENST00000479348 NPR1P16066 1061 aa17.69■□□□□ 0.42
PCIF1-202ENST00000479348 CHRNA5P30532 468 aa17.69■□□□□ 0.42
PCIF1-202ENST00000479348 STYK1Q6J9G0 422 aa17.69■□□□□ 0.42
PCIF1-202ENST00000479348 SYNE4Q8N205 404 aa17.69■□□□□ 0.42
PCIF1-202ENST00000479348 MASTLQ96GX5 879 aa17.69■□□□□ 0.42
PCIF1-202ENST00000479348 KIAA1551Q9HCM1 1747 aa17.68■□□□□ 0.42
PCIF1-202ENST00000479348 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
PCIF1-202ENST00000479348 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
PCIF1-202ENST00000479348 GRM8O00222 908 aa17.67■□□□□ 0.42
PCIF1-202ENST00000479348 ABCC4O15439 1325 aa17.67■□□□□ 0.42
PCIF1-202ENST00000479348 PDE8AO60658 829 aa17.67■□□□□ 0.42
PCIF1-202ENST00000479348 TRIM27P14373 513 aa17.67■□□□□ 0.42
PCIF1-202ENST00000479348 RTL5Q5HYW3 569 aaPredicted RBP17.67■□□□□ 0.42
PCIF1-202ENST00000479348 UBE3BQ7Z3V4 1068 aa17.67■□□□□ 0.42
PCIF1-202ENST00000479348 CNKSR1Q969H4 720 aa17.67■□□□□ 0.42
PCIF1-202ENST00000479348 C9orf78Q9NZ63 289 aaPredicted RBP17.67■□□□□ 0.42
PCIF1-202ENST00000479348 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
PCIF1-202ENST00000479348 MS4A1P11836 297 aa17.66■□□□□ 0.42
PCIF1-202ENST00000479348 ALDH1B1P30837 517 aa17.66■□□□□ 0.42
PCIF1-202ENST00000479348 HOXA10P31260 410 aaPredicted RBP17.66■□□□□ 0.42
PCIF1-202ENST00000479348 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
PCIF1-202ENST00000479348 INTS3Q68E01 1043 aaKnown RBP17.66■□□□□ 0.42
PCIF1-202ENST00000479348 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
PCIF1-202ENST00000479348 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
PCIF1-202ENST00000479348 ZNF622Q969S3 477 aaKnown RBP eCLIP17.66■□□□□ 0.42
PCIF1-202ENST00000479348 UTYO14607 1347 aa17.65■□□□□ 0.42
PCIF1-202ENST00000479348 CASP7P55210 303 aa17.65■□□□□ 0.42
PCIF1-202ENST00000479348 DALRD3Q5D0E6 543 aaKnown RBP17.65■□□□□ 0.42
PCIF1-202ENST00000479348 CRAMP1Q96RY5 1269 aa17.65■□□□□ 0.42
PCIF1-202ENST00000479348 PLA2G12BQ9BX93 195 aa17.65■□□□□ 0.42
PCIF1-202ENST00000479348 DLEC1Q9Y238 1755 aa17.64■□□□□ 0.41
PCIF1-202ENST00000479348 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.64■□□□□ 0.41
PCIF1-202ENST00000479348 RBM17Q96I25 401 aaKnown RBP17.64■□□□□ 0.41
PCIF1-202ENST00000479348 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
PCIF1-202ENST00000479348 GRIN3BO60391 1043 aa17.63■□□□□ 0.41
PCIF1-202ENST00000479348 GPR162Q16538 588 aa17.63■□□□□ 0.41
PCIF1-202ENST00000479348 C3orf67Q6ZVT6 689 aa17.63■□□□□ 0.41
PCIF1-202ENST00000479348 DZIP1LQ8IYY4 767 aaKnown RBP17.63■□□□□ 0.41
PCIF1-202ENST00000479348 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
PCIF1-202ENST00000479348 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
PCIF1-202ENST00000479348 BCS1LQ9Y276 419 aa17.63■□□□□ 0.41
PCIF1-202ENST00000479348 LAMB2P55268 1798 aa17.63■□□□□ 0.41
PCIF1-202ENST00000479348 DDX60Q8IY21 1712 aaKnown RBP17.62■□□□□ 0.41
PCIF1-202ENST00000479348 BRCA1P38398 1863 aaKnown RBP17.62■□□□□ 0.41
PCIF1-202ENST00000479348 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
PCIF1-202ENST00000479348 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
PCIF1-202ENST00000479348 FTSJ3Q8IY81 847 aaKnown RBP17.62■□□□□ 0.41
PCIF1-202ENST00000479348 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
PCIF1-202ENST00000479348 COL11A2P13942 1736 aaPredicted RBP17.62■□□□□ 0.41
PCIF1-202ENST00000479348 CTSWP56202 376 aa17.61■□□□□ 0.41
PCIF1-202ENST00000479348 CLUAP1Q96AJ1 413 aa17.61■□□□□ 0.41
PCIF1-202ENST00000479348 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms