RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 TOMM70O94826 608 aa23.09■■□□□ 1.29
HLA-A-206ENST00000479320 TCIRG1Q13488 830 aa23.09■■□□□ 1.29
HLA-A-206ENST00000479320 HSP90AB3PQ58FF7 597 aa23.09■■□□□ 1.29
HLA-A-206ENST00000479320 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
HLA-A-206ENST00000479320 RRAGCQ9HB90 399 aa23.09■■□□□ 1.29
HLA-A-206ENST00000479320 GLTPD2A6NH11 291 aa23.08■■□□□ 1.29
HLA-A-206ENST00000479320 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.29
HLA-A-206ENST00000479320 CCDC93Q567U6 631 aa23.08■■□□□ 1.29
HLA-A-206ENST00000479320 HOXA10P31260 410 aaPredicted RBP23.08■■□□□ 1.28
HLA-A-206ENST00000479320 OLFM4Q6UX06 510 aa23.08■■□□□ 1.28
HLA-A-206ENST00000479320 ANKRD13DQ6ZTN6 518 aa23.08■■□□□ 1.28
HLA-A-206ENST00000479320 NLRP10Q86W26 655 aa23.08■■□□□ 1.28
HLA-A-206ENST00000479320 HYPKQ9NX55 129 aa23.08■■□□□ 1.28
HLA-A-206ENST00000479320 CCDC27Q2M243 656 aa23.07■■□□□ 1.28
HLA-A-206ENST00000479320 SLC10A5Q5PT55 438 aa23.07■■□□□ 1.28
HLA-A-206ENST00000479320 C3orf67Q6ZVT6 689 aa23.07■■□□□ 1.28
HLA-A-206ENST00000479320 C8orf58Q8NAV2 365 aa23.07■■□□□ 1.28
HLA-A-206ENST00000479320 PLBD2Q8NHP8 589 aa23.07■■□□□ 1.28
HLA-A-206ENST00000479320 RPGRQ92834 1020 aaKnown RBP23.07■■□□□ 1.28
HLA-A-206ENST00000479320 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
HLA-A-206ENST00000479320 HSPA6P17066 643 aa23.05■■□□□ 1.28
HLA-A-206ENST00000479320 C16orf71Q8IYS4 520 aaPredicted RBP23.05■■□□□ 1.28
HLA-A-206ENST00000479320 NLRP3Q96P20 1036 aa23.05■■□□□ 1.28
HLA-A-206ENST00000479320 RNF123Q5XPI4 1314 aa23.04■■□□□ 1.28
HLA-A-206ENST00000479320 FKBP4Q02790 459 aaKnown RBP eCLIP23.04■■□□□ 1.28
HLA-A-206ENST00000479320 DPY19L2Q6NUT2 758 aa23.04■■□□□ 1.28
HLA-A-206ENST00000479320 RTKN2Q8IZC4 609 aa23.04■■□□□ 1.28
HLA-A-206ENST00000479320 SYNE4Q8N205 404 aa23.04■■□□□ 1.28
HLA-A-206ENST00000479320 RBM17Q96I25 401 aaKnown RBP23.04■■□□□ 1.28
HLA-A-206ENST00000479320 CRAMP1Q96RY5 1269 aa23.04■■□□□ 1.28
HLA-A-206ENST00000479320 TRMT112Q9UI30 125 aaKnown RBP23.04■■□□□ 1.28
HLA-A-206ENST00000479320 NCBP3Q53F19 620 aaKnown RBP23.02■■□□□ 1.28
HLA-A-206ENST00000479320 RBM46Q8TBY0 533 aaKnown RBP23.02■■□□□ 1.28
HLA-A-206ENST00000479320 TSR2Q969E8 191 aaKnown RBP23.02■■□□□ 1.28
HLA-A-206ENST00000479320 PHAXQ9H814 394 aaKnown RBP23.02■■□□□ 1.28
HLA-A-206ENST00000479320 VEGFAP15692 232 aaPredicted RBP23.01■■□□□ 1.27
HLA-A-206ENST00000479320 TSPYL6Q8N831 410 aa23.01■■□□□ 1.27
HLA-A-206ENST00000479320 ZNF428Q96B54 188 aa23.01■■□□□ 1.27
HLA-A-206ENST00000479320 ISCA1Q9BUE6 129 aa23.01■■□□□ 1.27
HLA-A-206ENST00000479320 LAMB2P55268 1798 aa23■■□□□ 1.27
HLA-A-206ENST00000479320 SH3TC1Q8TE82 1336 aa23■■□□□ 1.27
HLA-A-206ENST00000479320 CEP350Q5VT06 3117 aa23■■□□□ 1.27
HLA-A-206ENST00000479320 ATP5J2-PTCD1G3V325 749 aa23■■□□□ 1.27
HLA-A-206ENST00000479320 HCLS1P14317 486 aaPredicted RBP23■■□□□ 1.27
HLA-A-206ENST00000479320 CC2D2BQ6DHV5 1058 aa23■■□□□ 1.27
HLA-A-206ENST00000479320 ZNF277Q9NRM2 450 aaPredicted RBP23■■□□□ 1.27
HLA-A-206ENST00000479320 SNED1Q8TER0 1413 aa23■■□□□ 1.27
HLA-A-206ENST00000479320 POTECB2RU33 542 aa22.99■■□□□ 1.27
HLA-A-206ENST00000479320 IL16Q14005 1332 aa22.98■■□□□ 1.27
HLA-A-206ENST00000479320 WDR90Q96KV7 1748 aa22.98■■□□□ 1.27
HLA-A-206ENST00000479320 TCERG1O14776 1098 aaKnown RBP22.98■■□□□ 1.27
HLA-A-206ENST00000479320 PPEF1O14829 653 aaPredicted RBP22.98■■□□□ 1.27
HLA-A-206ENST00000479320 CCDC30Q5VVM6 783 aa22.98■■□□□ 1.27
HLA-A-206ENST00000479320 RIC3Q7Z5B4 369 aa22.98■■□□□ 1.27
HLA-A-206ENST00000479320 PSMD1Q99460 953 aa22.98■■□□□ 1.27
HLA-A-206ENST00000479320 CHMP4AQ9BY43 222 aa22.98■■□□□ 1.27
HLA-A-206ENST00000479320 GOLGA2Q08379 1002 aa22.97■■□□□ 1.27
HLA-A-206ENST00000479320 SLC51AQ86UW1 340 aa22.97■■□□□ 1.27
HLA-A-206ENST00000479320 SALL2Q9Y467 1007 aaPredicted RBP22.97■■□□□ 1.27
HLA-A-206ENST00000479320 DDNO94850 711 aaPredicted RBP22.96■■□□□ 1.27
HLA-A-206ENST00000479320 IARSP41252 1262 aaKnown RBP22.96■■□□□ 1.27
HLA-A-206ENST00000479320 TRIM28Q13263 835 aaKnown RBP22.96■■□□□ 1.27
HLA-A-206ENST00000479320 ABCC4O15439 1325 aa22.95■■□□□ 1.27
HLA-A-206ENST00000479320 FSTL1Q12841 308 aa22.95■■□□□ 1.26
HLA-A-206ENST00000479320 GRIPAP1Q4V328 841 aa22.95■■□□□ 1.26
HLA-A-206ENST00000479320 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
HLA-A-206ENST00000479320 FAM89AQ96GI7 184 aa22.95■■□□□ 1.26
HLA-A-206ENST00000479320 DDX60Q8IY21 1712 aaKnown RBP22.94■■□□□ 1.26
HLA-A-206ENST00000479320 TAF1P21675 1872 aa22.93■■□□□ 1.26
HLA-A-206ENST00000479320 TWISTNBQ3B726 338 aaPredicted RBP22.93■■□□□ 1.26
HLA-A-206ENST00000479320 WDR63Q8IWG1 891 aa22.93■■□□□ 1.26
HLA-A-206ENST00000479320 ATP6V0A2Q9Y487 856 aa22.93■■□□□ 1.26
HLA-A-206ENST00000479320 BBOX1O75936 387 aa22.92■■□□□ 1.26
HLA-A-206ENST00000479320 APLP1P51693 650 aa22.92■■□□□ 1.26
HLA-A-206ENST00000479320 RTL5Q5HYW3 569 aaPredicted RBP22.92■■□□□ 1.26
HLA-A-206ENST00000479320 DDX46Q7L014 1031 aaKnown RBP22.92■■□□□ 1.26
HLA-A-206ENST00000479320 SMC1BQ8NDV3 1235 aa22.92■■□□□ 1.26
HLA-A-206ENST00000479320 MYD88Q99836 296 aa22.92■■□□□ 1.26
HLA-A-206ENST00000479320 FZD9O00144 591 aa22.91■■□□□ 1.26
HLA-A-206ENST00000479320 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
HLA-A-206ENST00000479320 TMX4Q9H1E5 349 aaPredicted RBP22.91■■□□□ 1.26
HLA-A-206ENST00000479320 ZNF541Q9H0D2 1346 aa22.91■■□□□ 1.26
HLA-A-206ENST00000479320 STK31Q9BXU1 1019 aa22.9■■□□□ 1.26
HLA-A-206ENST00000479320 FANCIQ9NVI1 1328 aa22.9■■□□□ 1.26
HLA-A-206ENST00000479320 GRAPQ13588 217 aa22.89■■□□□ 1.26
HLA-A-206ENST00000479320 SF3B3Q15393 1217 aaKnown RBP22.89■■□□□ 1.26
HLA-A-206ENST00000479320 SP8Q8IXZ3 490 aa22.89■■□□□ 1.26
HLA-A-206ENST00000479320 GRAPLQ8TC17 118 aaPredicted RBP22.89■■□□□ 1.26
HLA-A-206ENST00000479320 JDP2Q8WYK2 163 aa22.89■■□□□ 1.26
HLA-A-206ENST00000479320 METTL22Q9BUU2 404 aaPredicted RBP22.89■■□□□ 1.26
HLA-A-206ENST00000479320 IRS4O14654 1257 aaPredicted RBP22.88■■□□□ 1.25
HLA-A-206ENST00000479320 IFFO2Q5TF58 517 aa22.88■■□□□ 1.25
HLA-A-206ENST00000479320 ZBTB38Q8NAP3 1195 aaPredicted RBP22.88■■□□□ 1.25
HLA-A-206ENST00000479320 CCDC191Q8NCU4 936 aa22.88■■□□□ 1.25
HLA-A-206ENST00000479320 L3MBTL3Q96JM7 780 aaPredicted RBP22.88■■□□□ 1.25
HLA-A-206ENST00000479320 MAP3K2Q9Y2U5 619 aa22.88■■□□□ 1.25
HLA-A-206ENST00000479320 COL4A5P29400 1685 aa22.88■■□□□ 1.25
HLA-A-206ENST00000479320 KSR2Q6VAB6 950 aa22.87■■□□□ 1.25
HLA-A-206ENST00000479320 SCN4AP35499 1836 aa22.87■■□□□ 1.25
HLA-A-206ENST00000479320 PI4KAP2A4QPH2 592 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms