RNA–Protein interactions for RNA: ENST00000479227.1

CNIH3-206, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 3

Gene CNIH3, Length 525 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-206ENST00000479227 COL3A1P02461 1466 aaPredicted RBP11.29□□□□□ -0.6
CNIH3-206ENST00000479227 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
CNIH3-206ENST00000479227 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
CNIH3-206ENST00000479227 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
CNIH3-206ENST00000479227 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
CNIH3-206ENST00000479227 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.6
CNIH3-206ENST00000479227 SCNN1DP51172 638 aa11.27□□□□□ -0.61
CNIH3-206ENST00000479227 CYP4F22Q6NT55 531 aa11.27□□□□□ -0.61
CNIH3-206ENST00000479227 LARGE2Q8N3Y3 721 aa11.27□□□□□ -0.61
CNIH3-206ENST00000479227 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
CNIH3-206ENST00000479227 ADARB2Q9NS39 739 aaKnown RBP11.27□□□□□ -0.61
CNIH3-206ENST00000479227 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.61
CNIH3-206ENST00000479227 HOXA10P31260 410 aaPredicted RBP11.26□□□□□ -0.61
CNIH3-206ENST00000479227 SAPCD2Q86UD0 394 aa11.26□□□□□ -0.61
CNIH3-206ENST00000479227 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
CNIH3-206ENST00000479227 RPGRQ92834 1020 aaKnown RBP11.26□□□□□ -0.61
CNIH3-206ENST00000479227 USP16Q9Y5T5 823 aa11.26□□□□□ -0.61
CNIH3-206ENST00000479227 KDM3BQ7LBC6 1761 aa11.26□□□□□ -0.61
CNIH3-206ENST00000479227 ERVV-1B6SEH8 477 aa11.25□□□□□ -0.61
CNIH3-206ENST00000479227 U2SURPO15042 1029 aaKnown RBP11.25□□□□□ -0.61
CNIH3-206ENST00000479227 HTATSF1O43719 755 aaKnown RBP11.25□□□□□ -0.61
CNIH3-206ENST00000479227 NOGQ13253 232 aa11.25□□□□□ -0.61
CNIH3-206ENST00000479227 CST9Q5W186 159 aa11.25□□□□□ -0.61
CNIH3-206ENST00000479227 NIM1KQ8IY84 436 aa11.25□□□□□ -0.61
CNIH3-206ENST00000479227 SUPT20HQ8NEM7 779 aa11.25□□□□□ -0.61
CNIH3-206ENST00000479227 CRAMP1Q96RY5 1269 aa11.25□□□□□ -0.61
CNIH3-206ENST00000479227 MCOLN1Q9GZU1 580 aa11.25□□□□□ -0.61
CNIH3-206ENST00000479227 DDX60Q8IY21 1712 aaKnown RBP11.25□□□□□ -0.61
CNIH3-206ENST00000479227 LAMB2P55268 1798 aa11.24□□□□□ -0.61
CNIH3-206ENST00000479227 EPS15P42566 896 aa11.24□□□□□ -0.61
CNIH3-206ENST00000479227 RBM17Q96I25 401 aaKnown RBP11.24□□□□□ -0.61
CNIH3-206ENST00000479227 GPRC5DQ9NZD1 345 aa11.24□□□□□ -0.61
CNIH3-206ENST00000479227 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
CNIH3-206ENST00000479227 COL4A5P29400 1685 aa11.24□□□□□ -0.61
CNIH3-206ENST00000479227 CELF2O95319 508 aaKnown RBP11.23□□□□□ -0.61
CNIH3-206ENST00000479227 GRM1Q13255 1194 aa11.23□□□□□ -0.61
CNIH3-206ENST00000479227 OLFM4Q6UX06 510 aa11.23□□□□□ -0.61
CNIH3-206ENST00000479227 CFAP53Q96M91 514 aa11.23□□□□□ -0.61
CNIH3-206ENST00000479227 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
CNIH3-206ENST00000479227 SAGE1Q9NXZ1 904 aa11.23□□□□□ -0.61
CNIH3-206ENST00000479227 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
CNIH3-206ENST00000479227 PPEF1O14829 653 aaPredicted RBP11.22□□□□□ -0.61
CNIH3-206ENST00000479227 PER1O15534 1290 aaPredicted RBP11.22□□□□□ -0.61
CNIH3-206ENST00000479227 PPIP5K2O43314 1243 aa11.22□□□□□ -0.61
CNIH3-206ENST00000479227 TRIM26Q12899 539 aaPredicted RBP11.22□□□□□ -0.61
CNIH3-206ENST00000479227 DGKZQ13574 1117 aa11.22□□□□□ -0.61
CNIH3-206ENST00000479227 KIF6Q6ZMV9 814 aa11.22□□□□□ -0.61
CNIH3-206ENST00000479227 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
CNIH3-206ENST00000479227 ZNRF3Q9ULT6 936 aa11.22□□□□□ -0.61
CNIH3-206ENST00000479227 ABCC12Q96J65 1359 aa11.21□□□□□ -0.61
CNIH3-206ENST00000479227 MAP3K15Q6ZN16 1313 aa11.21□□□□□ -0.61
CNIH3-206ENST00000479227 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
CNIH3-206ENST00000479227 KCNQ3O43525 872 aa11.21□□□□□ -0.61
CNIH3-206ENST00000479227 AOC2O75106 756 aa11.21□□□□□ -0.61
CNIH3-206ENST00000479227 TNIP1Q15025 636 aa11.21□□□□□ -0.61
CNIH3-206ENST00000479227 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
CNIH3-206ENST00000479227 NBPF15Q8N660 670 aa11.21□□□□□ -0.61
CNIH3-206ENST00000479227 PNISRQ8TF01 805 aaKnown RBP11.21□□□□□ -0.61
CNIH3-206ENST00000479227 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
CNIH3-206ENST00000479227 TRAF5O00463 557 aa11.2□□□□□ -0.62
CNIH3-206ENST00000479227 PRKAR2BP31323 418 aa11.2□□□□□ -0.62
CNIH3-206ENST00000479227 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
CNIH3-206ENST00000479227 HLFQ16534 295 aa11.2□□□□□ -0.62
CNIH3-206ENST00000479227 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
CNIH3-206ENST00000479227 PPP1R42Q7Z4L9 355 aa11.2□□□□□ -0.62
CNIH3-206ENST00000479227 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
CNIH3-206ENST00000479227 RTFDC1Q9BY42 306 aaPredicted RBP11.2□□□□□ -0.62
CNIH3-206ENST00000479227 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
CNIH3-206ENST00000479227 LRRC37AA6NMS7 1700 aa11.2□□□□□ -0.62
CNIH3-206ENST00000479227 CEP290O15078 2479 aa11.19□□□□□ -0.62
CNIH3-206ENST00000479227 KIAA0100Q14667 2235 aaKnown RBP11.19□□□□□ -0.62
CNIH3-206ENST00000479227 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
CNIH3-206ENST00000479227 TAF7Q15545 349 aaPredicted RBP11.19□□□□□ -0.62
CNIH3-206ENST00000479227 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
CNIH3-206ENST00000479227 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
CNIH3-206ENST00000479227 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
CNIH3-206ENST00000479227 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
CNIH3-206ENST00000479227 TSKSQ9UJT2 592 aa11.19□□□□□ -0.62
CNIH3-206ENST00000479227 ATP6V0A2Q9Y487 856 aa11.19□□□□□ -0.62
CNIH3-206ENST00000479227 PSME4Q14997 1843 aa11.19□□□□□ -0.62
CNIH3-206ENST00000479227 H7C1D1 291 aa11.18□□□□□ -0.62
CNIH3-206ENST00000479227 BBOX1O75936 387 aa11.18□□□□□ -0.62
CNIH3-206ENST00000479227 CXCL9Q07325 125 aa11.18□□□□□ -0.62
CNIH3-206ENST00000479227 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
CNIH3-206ENST00000479227 TMC4Q7Z404 712 aa11.18□□□□□ -0.62
CNIH3-206ENST00000479227 NUTM1Q86Y26 1132 aa11.18□□□□□ -0.62
CNIH3-206ENST00000479227 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
CNIH3-206ENST00000479227 BCL2L13Q9BXK5 485 aa11.18□□□□□ -0.62
CNIH3-206ENST00000479227 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
CNIH3-206ENST00000479227 TAF1P21675 1872 aa11.18□□□□□ -0.62
CNIH3-206ENST00000479227 PRAMEF22A3QJZ6 481 aa11.17□□□□□ -0.62
CNIH3-206ENST00000479227 NEFMP07197 916 aa11.17□□□□□ -0.62
CNIH3-206ENST00000479227 GMPSP49915 693 aaPredicted RBP11.17□□□□□ -0.62
CNIH3-206ENST00000479227 HUNKP57058 714 aa11.17□□□□□ -0.62
CNIH3-206ENST00000479227 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
CNIH3-206ENST00000479227 KIAA2012Q0VF49 1180 aa11.17□□□□□ -0.62
CNIH3-206ENST00000479227 AOC3Q16853 763 aa11.17□□□□□ -0.62
CNIH3-206ENST00000479227 DPF2Q92785 391 aa11.17□□□□□ -0.62
CNIH3-206ENST00000479227 NTSR2O95665 410 aa11.16□□□□□ -0.62
CNIH3-206ENST00000479227 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms