RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CRY2Q49AN0 593 aa19.83■□□□□ 0.77
C9orf3-217ENST00000479161 TTLL6Q8N841 843 aa19.83■□□□□ 0.77
C9orf3-217ENST00000479161 MASTLQ96GX5 879 aa19.83■□□□□ 0.77
C9orf3-217ENST00000479161 CCDC191Q8NCU4 936 aa19.82■□□□□ 0.76
C9orf3-217ENST00000479161 CNKSR1Q969H4 720 aa19.82■□□□□ 0.76
C9orf3-217ENST00000479161 METTL22Q9BUU2 404 aaPredicted RBP19.82■□□□□ 0.76
C9orf3-217ENST00000479161 COL11A2P13942 1736 aaPredicted RBP19.82■□□□□ 0.76
C9orf3-217ENST00000479161 NPR1P16066 1061 aa19.81■□□□□ 0.76
C9orf3-217ENST00000479161 FLIIQ13045 1269 aa19.81■□□□□ 0.76
C9orf3-217ENST00000479161 BCS1LQ9Y276 419 aa19.81■□□□□ 0.76
C9orf3-217ENST00000479161 PI4KAP2A4QPH2 592 aa19.8■□□□□ 0.76
C9orf3-217ENST00000479161 HOXA10P31260 410 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-217ENST00000479161 ERFEQ4G0M1 354 aa19.8■□□□□ 0.76
C9orf3-217ENST00000479161 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
C9orf3-217ENST00000479161 PI4KAP1Q8N8J0 262 aa19.8■□□□□ 0.76
C9orf3-217ENST00000479161 CDCA7LQ96GN5 454 aa19.8■□□□□ 0.76
C9orf3-217ENST00000479161 SH3TC1Q8TE82 1336 aa19.79■□□□□ 0.76
C9orf3-217ENST00000479161 HSP90B1P14625 803 aaKnown RBP19.79■□□□□ 0.76
C9orf3-217ENST00000479161 ALDH1B1P30837 517 aa19.79■□□□□ 0.76
C9orf3-217ENST00000479161 TRMT112Q9UI30 125 aaKnown RBP19.79■□□□□ 0.76
C9orf3-217ENST00000479161 ADCY9O60503 1353 aa19.79■□□□□ 0.76
C9orf3-217ENST00000479161 ABCC12Q96J65 1359 aa19.79■□□□□ 0.76
C9orf3-217ENST00000479161 ALDH1L2Q3SY69 923 aa19.78■□□□□ 0.76
C9orf3-217ENST00000479161 G2E3Q7L622 706 aa19.78■□□□□ 0.76
C9orf3-217ENST00000479161 NUTM1Q86Y26 1132 aa19.78■□□□□ 0.76
C9orf3-217ENST00000479161 CCDC24Q8N4L8 307 aa19.78■□□□□ 0.76
C9orf3-217ENST00000479161 NLRP3Q96P20 1036 aa19.78■□□□□ 0.76
C9orf3-217ENST00000479161 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
C9orf3-217ENST00000479161 FAM177BA6PVY3 158 aa19.77■□□□□ 0.76
C9orf3-217ENST00000479161 NEXNQ0ZGT2 675 aa19.77■□□□□ 0.76
C9orf3-217ENST00000479161 ZBTB38Q8NAP3 1195 aaPredicted RBP19.77■□□□□ 0.76
C9orf3-217ENST00000479161 TNRC6CQ9HCJ0 1690 aaKnown RBP19.76■□□□□ 0.75
C9orf3-217ENST00000479161 BRPF1P55201 1214 aaPredicted RBP19.76■□□□□ 0.75
C9orf3-217ENST00000479161 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
C9orf3-217ENST00000479161 SOGA3Q5TF21 947 aa19.76■□□□□ 0.75
C9orf3-217ENST00000479161 ZNF622Q969S3 477 aaKnown RBP eCLIP19.76■□□□□ 0.75
C9orf3-217ENST00000479161 CRAMP1Q96RY5 1269 aa19.76■□□□□ 0.75
C9orf3-217ENST00000479161 SLX4Q8IY92 1834 aa19.76■□□□□ 0.75
C9orf3-217ENST00000479161 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
C9orf3-217ENST00000479161 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
C9orf3-217ENST00000479161 TCERG1O14776 1098 aaKnown RBP19.75■□□□□ 0.75
C9orf3-217ENST00000479161 PCCAP05165 728 aaPredicted RBP19.75■□□□□ 0.75
C9orf3-217ENST00000479161 FKBP5Q13451 457 aaPredicted RBP19.75■□□□□ 0.75
C9orf3-217ENST00000479161 DNAAF4Q8WXU2 420 aa19.75■□□□□ 0.75
C9orf3-217ENST00000479161 MYD88Q99836 296 aa19.75■□□□□ 0.75
C9orf3-217ENST00000479161 CWC25Q9NXE8 425 aaPredicted RBP19.75■□□□□ 0.75
C9orf3-217ENST00000479161 LAMB2P55268 1798 aa19.75■□□□□ 0.75
C9orf3-217ENST00000479161 GRIPAP1Q4V328 841 aa19.74■□□□□ 0.75
C9orf3-217ENST00000479161 LINS1Q8NG48 757 aa19.74■□□□□ 0.75
C9orf3-217ENST00000479161 C7orf43Q8WVR3 580 aa19.74■□□□□ 0.75
C9orf3-217ENST00000479161 DDX60Q8IY21 1712 aaKnown RBP19.73■□□□□ 0.75
C9orf3-217ENST00000479161 SBF1O95248 1867 aa19.73■□□□□ 0.75
C9orf3-217ENST00000479161 FER1L6Q2WGJ9 1857 aa19.73■□□□□ 0.75
C9orf3-217ENST00000479161 IGKV5-2P06315 115 aa19.73■□□□□ 0.75
C9orf3-217ENST00000479161 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
C9orf3-217ENST00000479161 CC2D2BQ6DHV5 1058 aa19.73■□□□□ 0.75
C9orf3-217ENST00000479161 PRPF40BQ6NWY9 871 aaKnown RBP19.73■□□□□ 0.75
C9orf3-217ENST00000479161 PTPRCP08575 1304 aa19.73■□□□□ 0.75
C9orf3-217ENST00000479161 MRPL50Q8N5N7 158 aaKnown RBP19.72■□□□□ 0.75
C9orf3-217ENST00000479161 RPGRQ92834 1020 aaKnown RBP19.72■□□□□ 0.75
C9orf3-217ENST00000479161 RBM17Q96I25 401 aaKnown RBP19.72■□□□□ 0.75
C9orf3-217ENST00000479161 CDHR2Q9BYE9 1310 aa19.72■□□□□ 0.75
C9orf3-217ENST00000479161 LTBP3Q9NS15 1303 aa19.72■□□□□ 0.75
C9orf3-217ENST00000479161 CACNA1SQ13698 1873 aa19.71■□□□□ 0.75
C9orf3-217ENST00000479161 NEURL1BA8MQ27 555 aa19.71■□□□□ 0.75
C9orf3-217ENST00000479161 ARHGAP27Q6ZUM4 889 aa19.71■□□□□ 0.75
C9orf3-217ENST00000479161 SSH1Q8WYL5 1049 aa19.71■□□□□ 0.75
C9orf3-217ENST00000479161 FAM89AQ96GI7 184 aa19.71■□□□□ 0.75
C9orf3-217ENST00000479161 WWC3Q9ULE0 1092 aa19.7■□□□□ 0.74
C9orf3-217ENST00000479161 H7C1W4 665 aa19.69■□□□□ 0.74
C9orf3-217ENST00000479161 IRS4O14654 1257 aaPredicted RBP19.69■□□□□ 0.74
C9orf3-217ENST00000479161 BBOX1O75936 387 aa19.69■□□□□ 0.74
C9orf3-217ENST00000479161 HCLS1P14317 486 aaPredicted RBP19.69■□□□□ 0.74
C9orf3-217ENST00000479161 SYNE4Q8N205 404 aa19.69■□□□□ 0.74
C9orf3-217ENST00000479161 MYH3P11055 1940 aa19.68■□□□□ 0.74
C9orf3-217ENST00000479161 GCKRQ14397 625 aa19.68■□□□□ 0.74
C9orf3-217ENST00000479161 BEND3Q5T5X7 828 aa19.68■□□□□ 0.74
C9orf3-217ENST00000479161 C3orf67Q6ZVT6 689 aa19.68■□□□□ 0.74
C9orf3-217ENST00000479161 TMC4Q7Z404 712 aa19.68■□□□□ 0.74
C9orf3-217ENST00000479161 ZC3H4Q9UPT8 1303 aaKnown RBP19.68■□□□□ 0.74
C9orf3-217ENST00000479161 DICER1Q9UPY3 1922 aaKnown RBP19.67■□□□□ 0.74
C9orf3-217ENST00000479161 C21orf2O43822 256 aa19.67■□□□□ 0.74
C9orf3-217ENST00000479161 PDE8AO60658 829 aa19.67■□□□□ 0.74
C9orf3-217ENST00000479161 ALDH1L1O75891 902 aa19.67■□□□□ 0.74
C9orf3-217ENST00000479161 RTKN2Q8IZC4 609 aa19.67■□□□□ 0.74
C9orf3-217ENST00000479161 PLA2G12BQ9BX93 195 aa19.67■□□□□ 0.74
C9orf3-217ENST00000479161 RARSP54136 660 aaKnown RBP19.66■□□□□ 0.74
C9orf3-217ENST00000479161 CWF19L2Q2TBE0 894 aaKnown RBP19.66■□□□□ 0.74
C9orf3-217ENST00000479161 CCDC93Q567U6 631 aa19.66■□□□□ 0.74
C9orf3-217ENST00000479161 DDX46Q7L014 1031 aaKnown RBP19.66■□□□□ 0.74
C9orf3-217ENST00000479161 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
C9orf3-217ENST00000479161 CCDC88AQ3V6T2 1871 aa19.66■□□□□ 0.74
C9orf3-217ENST00000479161 SNED1Q8TER0 1413 aa19.66■□□□□ 0.74
C9orf3-217ENST00000479161 NFKBIEO00221 500 aa19.65■□□□□ 0.74
C9orf3-217ENST00000479161 LMNB1P20700 586 aa19.65■□□□□ 0.74
C9orf3-217ENST00000479161 ARHGAP45Q92619 1136 aa19.65■□□□□ 0.74
C9orf3-217ENST00000479161 CASP7P55210 303 aa19.64■□□□□ 0.73
C9orf3-217ENST00000479161 GRAPQ13588 217 aa19.64■□□□□ 0.73
C9orf3-217ENST00000479161 GRAPLQ8TC17 118 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-217ENST00000479161 SMC4Q9NTJ3 1288 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms