RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 PHAXQ9H814 394 aaKnown RBP21.82■■□□□ 1.08
CDKN1A-207ENST00000478800 RNF181Q9P0P0 153 aa21.82■■□□□ 1.08
CDKN1A-207ENST00000478800 TRMT112Q9UI30 125 aaKnown RBP21.82■■□□□ 1.08
CDKN1A-207ENST00000478800 NUP98P52948 1817 aa21.82■■□□□ 1.08
CDKN1A-207ENST00000478800 ARFGEF1Q9Y6D6 1849 aa21.81■■□□□ 1.08
CDKN1A-207ENST00000478800 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
CDKN1A-207ENST00000478800 GPBP1L1Q9HC44 474 aaPredicted RBP21.81■■□□□ 1.08
CDKN1A-207ENST00000478800 DLEC1Q9Y238 1755 aa21.81■■□□□ 1.08
CDKN1A-207ENST00000478800 ADCY9O60503 1353 aa21.8■■□□□ 1.08
CDKN1A-207ENST00000478800 RASSF7Q02833 373 aa21.8■■□□□ 1.08
CDKN1A-207ENST00000478800 DIEXFQ68CQ4 756 aaKnown RBP21.8■■□□□ 1.08
CDKN1A-207ENST00000478800 SH3TC1Q8TE82 1336 aa21.8■■□□□ 1.08
CDKN1A-207ENST00000478800 ATP5J2-PTCD1G3V325 749 aa21.79■■□□□ 1.08
CDKN1A-207ENST00000478800 TCERG1O14776 1098 aaKnown RBP21.79■■□□□ 1.08
CDKN1A-207ENST00000478800 CRY2Q49AN0 593 aa21.79■■□□□ 1.08
CDKN1A-207ENST00000478800 CEP350Q5VT06 3117 aa21.79■■□□□ 1.08
CDKN1A-207ENST00000478800 LMNB1P20700 586 aa21.78■■□□□ 1.08
CDKN1A-207ENST00000478800 EXOSC9Q06265 439 aaKnown RBP21.78■■□□□ 1.08
CDKN1A-207ENST00000478800 RBM17Q96I25 401 aaKnown RBP21.78■■□□□ 1.08
CDKN1A-207ENST00000478800 RIC1Q4ADV7 1423 aa21.78■■□□□ 1.08
CDKN1A-207ENST00000478800 COL11A2P13942 1736 aaPredicted RBP21.77■■□□□ 1.08
CDKN1A-207ENST00000478800 SLC4A2P04920 1241 aa21.77■■□□□ 1.08
CDKN1A-207ENST00000478800 CCDC93Q567U6 631 aa21.77■■□□□ 1.08
CDKN1A-207ENST00000478800 SLC10A5Q5PT55 438 aa21.77■■□□□ 1.08
CDKN1A-207ENST00000478800 ISCA1Q9BUE6 129 aa21.77■■□□□ 1.08
CDKN1A-207ENST00000478800 TAOK3Q9H2K8 898 aa21.76■■□□□ 1.07
CDKN1A-207ENST00000478800 NFKBIEO00221 500 aa21.75■■□□□ 1.07
CDKN1A-207ENST00000478800 HCLS1P14317 486 aaPredicted RBP21.75■■□□□ 1.07
CDKN1A-207ENST00000478800 ZNF428Q96B54 188 aa21.75■■□□□ 1.07
CDKN1A-207ENST00000478800 MYD88Q99836 296 aa21.75■■□□□ 1.07
CDKN1A-207ENST00000478800 TMX4Q9H1E5 349 aaPredicted RBP21.75■■□□□ 1.07
CDKN1A-207ENST00000478800 SPINK5Q9NQ38 1064 aaPredicted RBP21.75■■□□□ 1.07
CDKN1A-207ENST00000478800 VAMP4O75379 141 aa21.74■■□□□ 1.07
CDKN1A-207ENST00000478800 HOXA10P31260 410 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-207ENST00000478800 TRIM28Q13263 835 aaKnown RBP21.74■■□□□ 1.07
CDKN1A-207ENST00000478800 NEXNQ0ZGT2 675 aa21.73■■□□□ 1.07
CDKN1A-207ENST00000478800 KSR2Q6VAB6 950 aa21.73■■□□□ 1.07
CDKN1A-207ENST00000478800 RTKN2Q8IZC4 609 aa21.73■■□□□ 1.07
CDKN1A-207ENST00000478800 FAM89AQ96GI7 184 aa21.73■■□□□ 1.07
CDKN1A-207ENST00000478800 CRAMP1Q96RY5 1269 aa21.73■■□□□ 1.07
CDKN1A-207ENST00000478800 METTL22Q9BUU2 404 aaPredicted RBP21.73■■□□□ 1.07
CDKN1A-207ENST00000478800 MAP3K2Q9Y2U5 619 aa21.73■■□□□ 1.07
CDKN1A-207ENST00000478800 PI4KAP2A4QPH2 592 aa21.72■■□□□ 1.07
CDKN1A-207ENST00000478800 HSP90B1P14625 803 aaKnown RBP21.72■■□□□ 1.07
CDKN1A-207ENST00000478800 PI4KAP1Q8N8J0 262 aa21.72■■□□□ 1.07
CDKN1A-207ENST00000478800 C7orf43Q8WVR3 580 aa21.72■■□□□ 1.07
CDKN1A-207ENST00000478800 ZNF521Q96K83 1311 aa21.72■■□□□ 1.07
CDKN1A-207ENST00000478800 LTBP3Q9NS15 1303 aa21.72■■□□□ 1.07
CDKN1A-207ENST00000478800 E9PSI1 815 aa21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 RTL5Q5HYW3 569 aaPredicted RBP21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 CC2D2BQ6DHV5 1058 aa21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 C3orf67Q6ZVT6 689 aa21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 DDX46Q7L014 1031 aaKnown RBP21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 SYNE4Q8N205 404 aa21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 CCDC191Q8NCU4 936 aa21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 CWC25Q9NXE8 425 aaPredicted RBP21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 TNRC6CQ9HCJ0 1690 aaKnown RBP21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 ZC3H4Q9UPT8 1303 aaKnown RBP21.71■■□□□ 1.07
CDKN1A-207ENST00000478800 ANKRD36CQ5JPF3 1778 aa21.7■■□□□ 1.06
CDKN1A-207ENST00000478800 PPEF1O14829 653 aaPredicted RBP21.7■■□□□ 1.06
CDKN1A-207ENST00000478800 FLIIQ13045 1269 aa21.7■■□□□ 1.06
CDKN1A-207ENST00000478800 FKBP5Q13451 457 aaPredicted RBP21.7■■□□□ 1.06
CDKN1A-207ENST00000478800 ZBTB38Q8NAP3 1195 aaPredicted RBP21.7■■□□□ 1.06
CDKN1A-207ENST00000478800 SLX4Q8IY92 1834 aa21.69■■□□□ 1.06
CDKN1A-207ENST00000478800 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.069e-7■■■■□ 21.3
CDKN1A-207ENST00000478800 G2E3Q7L622 706 aa21.69■■□□□ 1.06
CDKN1A-207ENST00000478800 MIER1Q8N108 512 aa21.69■■□□□ 1.06
CDKN1A-207ENST00000478800 IRS4O14654 1257 aaPredicted RBP21.68■■□□□ 1.06
CDKN1A-207ENST00000478800 GRIPAP1Q4V328 841 aa21.68■■□□□ 1.06
CDKN1A-207ENST00000478800 PRELPP51888 382 aa21.67■■□□□ 1.06
CDKN1A-207ENST00000478800 OLFM4Q6UX06 510 aa21.67■■□□□ 1.06
CDKN1A-207ENST00000478800 ABCC4O15439 1325 aa21.66■■□□□ 1.06
CDKN1A-207ENST00000478800 BBOX1O75936 387 aa21.66■■□□□ 1.06
CDKN1A-207ENST00000478800 PCCAP05165 728 aaPredicted RBP21.66■■□□□ 1.06
CDKN1A-207ENST00000478800 DPY19L2Q6NUT2 758 aa21.66■■□□□ 1.06
CDKN1A-207ENST00000478800 ARFGEF2Q9Y6D5 1785 aa21.66■■□□□ 1.06
CDKN1A-207ENST00000478800 GRAPQ13588 217 aa21.65■■□□□ 1.06
CDKN1A-207ENST00000478800 GRAPLQ8TC17 118 aaPredicted RBP21.65■■□□□ 1.06
CDKN1A-207ENST00000478800 ZNF277Q9NRM2 450 aaPredicted RBP21.65■■□□□ 1.06
CDKN1A-207ENST00000478800 SF3B3Q15393 1217 aaKnown RBP21.64■■□□□ 1.05
CDKN1A-207ENST00000478800 C16orf71Q8IYS4 520 aaPredicted RBP21.64■■□□□ 1.05
CDKN1A-207ENST00000478800 DNAAF4Q8WXU2 420 aa21.64■■□□□ 1.05
CDKN1A-207ENST00000478800 ATP6V0A2Q9Y487 856 aa21.64■■□□□ 1.05
CDKN1A-207ENST00000478800 CACNA1SQ13698 1873 aa21.64■■□□□ 1.05
CDKN1A-207ENST00000478800 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
CDKN1A-207ENST00000478800 PSMD1Q99460 953 aa21.63■■□□□ 1.05
CDKN1A-207ENST00000478800 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
CDKN1A-207ENST00000478800 GLTPD2A6NH11 291 aa21.62■■□□□ 1.05
CDKN1A-207ENST00000478800 IGKV5-2P06315 115 aa21.62■■□□□ 1.05
CDKN1A-207ENST00000478800 TMC4Q7Z404 712 aa21.62■■□□□ 1.05
CDKN1A-207ENST00000478800 JARID2Q92833 1246 aaPredicted RBP21.62■■□□□ 1.05
CDKN1A-207ENST00000478800 NEURL1BA8MQ27 555 aa21.61■■□□□ 1.05
CDKN1A-207ENST00000478800 PDE8AO60658 829 aa21.61■■□□□ 1.05
CDKN1A-207ENST00000478800 IARSP41252 1262 aaKnown RBP21.61■■□□□ 1.05
CDKN1A-207ENST00000478800 CWF19L2Q2TBE0 894 aaKnown RBP21.61■■□□□ 1.05
CDKN1A-207ENST00000478800 SP8Q8IXZ3 490 aa21.61■■□□□ 1.05
CDKN1A-207ENST00000478800 FER1L6Q2WGJ9 1857 aa21.6■■□□□ 1.05
CDKN1A-207ENST00000478800 KIF3CO14782 793 aa21.6■■□□□ 1.05
CDKN1A-207ENST00000478800 CCDC152Q4G0S7 254 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms