RNA–Protein interactions for RNA: ENST00000478681.1

COL4A2-205, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-205ENST00000478681 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
COL4A2-205ENST00000478681 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
COL4A2-205ENST00000478681 LAS1LQ9Y4W2 734 aaKnown RBP17.09■□□□□ 0.33
COL4A2-205ENST00000478681 SNED1Q8TER0 1413 aa17.09■□□□□ 0.33
COL4A2-205ENST00000478681 APAF1O14727 1248 aa17.08■□□□□ 0.32
COL4A2-205ENST00000478681 SMC1BQ8NDV3 1235 aa17.08■□□□□ 0.32
COL4A2-205ENST00000478681 XAGE3Q8WTP9 111 aa17.08■□□□□ 0.32
COL4A2-205ENST00000478681 NECTIN2Q92692 538 aa17.08■□□□□ 0.32
COL4A2-205ENST00000478681 RNF123Q5XPI4 1314 aa17.07■□□□□ 0.32
COL4A2-205ENST00000478681 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
COL4A2-205ENST00000478681 CC2D2BQ6DHV5 1058 aa17.07■□□□□ 0.32
COL4A2-205ENST00000478681 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
COL4A2-205ENST00000478681 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
COL4A2-205ENST00000478681 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
COL4A2-205ENST00000478681 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
COL4A2-205ENST00000478681 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
COL4A2-205ENST00000478681 C3orf67Q6ZVT6 689 aa17.06■□□□□ 0.32
COL4A2-205ENST00000478681 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
COL4A2-205ENST00000478681 PSMD1Q99460 953 aa17.06■□□□□ 0.32
COL4A2-205ENST00000478681 ZNF277Q9NRM2 450 aaPredicted RBP17.06■□□□□ 0.32
COL4A2-205ENST00000478681 MBIPQ9NS73 344 aa17.06■□□□□ 0.32
COL4A2-205ENST00000478681 CHPF2Q9P2E5 772 aa17.06■□□□□ 0.32
COL4A2-205ENST00000478681 ANKRD36CQ5JPF3 1778 aa17.06■□□□□ 0.32
COL4A2-205ENST00000478681 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
COL4A2-205ENST00000478681 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
COL4A2-205ENST00000478681 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
COL4A2-205ENST00000478681 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
COL4A2-205ENST00000478681 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
COL4A2-205ENST00000478681 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
COL4A2-205ENST00000478681 NLRP3Q96P20 1036 aa17.05■□□□□ 0.32
COL4A2-205ENST00000478681 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
COL4A2-205ENST00000478681 L3MBTL3Q96JM7 780 aaPredicted RBP17.04■□□□□ 0.32
COL4A2-205ENST00000478681 IFT57Q9NWB7 429 aa17.04■□□□□ 0.32
COL4A2-205ENST00000478681 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
COL4A2-205ENST00000478681 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
COL4A2-205ENST00000478681 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
COL4A2-205ENST00000478681 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
COL4A2-205ENST00000478681 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
COL4A2-205ENST00000478681 SCN4AP35499 1836 aa17.03■□□□□ 0.32
COL4A2-205ENST00000478681 FZD9O00144 591 aa17.02■□□□□ 0.32
COL4A2-205ENST00000478681 GNAI1P63096 354 aa17.02■□□□□ 0.32
COL4A2-205ENST00000478681 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.32
COL4A2-205ENST00000478681 HYPKQ9NX55 129 aa17.02■□□□□ 0.32
COL4A2-205ENST00000478681 HTRA3P83110 453 aa17.01■□□□□ 0.31
COL4A2-205ENST00000478681 ISCA1Q9BUE6 129 aa17.01■□□□□ 0.31
COL4A2-205ENST00000478681 TRMT112Q9UI30 125 aaKnown RBP17.01■□□□□ 0.31
COL4A2-205ENST00000478681 ZNF541Q9H0D2 1346 aa17■□□□□ 0.31
COL4A2-205ENST00000478681 LAMB2P55268 1798 aa17■□□□□ 0.31
COL4A2-205ENST00000478681 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
COL4A2-205ENST00000478681 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
COL4A2-205ENST00000478681 SH3TC1Q8TE82 1336 aa16.99■□□□□ 0.31
COL4A2-205ENST00000478681 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
COL4A2-205ENST00000478681 TRIM28Q13263 835 aaKnown RBP16.99■□□□□ 0.31
COL4A2-205ENST00000478681 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
COL4A2-205ENST00000478681 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
COL4A2-205ENST00000478681 ATP6V0A2Q9Y487 856 aa16.99■□□□□ 0.31
COL4A2-205ENST00000478681 ABCC4O15439 1325 aa16.98■□□□□ 0.31
COL4A2-205ENST00000478681 BBOX1O75936 387 aa16.98■□□□□ 0.31
COL4A2-205ENST00000478681 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
COL4A2-205ENST00000478681 POTEJP0CG39 1038 aa16.98■□□□□ 0.31
COL4A2-205ENST00000478681 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
COL4A2-205ENST00000478681 JDP2Q8WYK2 163 aa16.98■□□□□ 0.31
COL4A2-205ENST00000478681 TAF1DQ9H5J8 278 aaPredicted RBP16.98■□□□□ 0.31
COL4A2-205ENST00000478681 COL4A5P29400 1685 aa16.97■□□□□ 0.31
COL4A2-205ENST00000478681 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
COL4A2-205ENST00000478681 GPC2Q8N158 579 aa16.97■□□□□ 0.31
COL4A2-205ENST00000478681 JMYQ8N9B5 988 aa16.97■□□□□ 0.31
COL4A2-205ENST00000478681 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
COL4A2-205ENST00000478681 VPS33BQ9H267 617 aa16.97■□□□□ 0.31
COL4A2-205ENST00000478681 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.31
COL4A2-205ENST00000478681 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
COL4A2-205ENST00000478681 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
COL4A2-205ENST00000478681 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
COL4A2-205ENST00000478681 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
COL4A2-205ENST00000478681 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.31
COL4A2-205ENST00000478681 TAF1P21675 1872 aa16.96■□□□□ 0.31
COL4A2-205ENST00000478681 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
COL4A2-205ENST00000478681 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
COL4A2-205ENST00000478681 DDX46Q7L014 1031 aaKnown RBP16.95■□□□□ 0.3
COL4A2-205ENST00000478681 LDHDQ86WU2 507 aa16.95■□□□□ 0.3
COL4A2-205ENST00000478681 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
COL4A2-205ENST00000478681 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
COL4A2-205ENST00000478681 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
COL4A2-205ENST00000478681 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
COL4A2-205ENST00000478681 HACL1Q9UJ83 578 aa16.95■□□□□ 0.3
COL4A2-205ENST00000478681 DDX60Q8IY21 1712 aaKnown RBP16.95■□□□□ 0.3
COL4A2-205ENST00000478681 GRAPQ13588 217 aa16.94■□□□□ 0.3
COL4A2-205ENST00000478681 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
COL4A2-205ENST00000478681 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
COL4A2-205ENST00000478681 FAM89AQ96GI7 184 aa16.94■□□□□ 0.3
COL4A2-205ENST00000478681 EPHX2P34913 555 aa16.93■□□□□ 0.3
COL4A2-205ENST00000478681 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
COL4A2-205ENST00000478681 RIC3Q7Z5B4 369 aa16.93■□□□□ 0.3
COL4A2-205ENST00000478681 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
COL4A2-205ENST00000478681 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
COL4A2-205ENST00000478681 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
COL4A2-205ENST00000478681 TMC4Q7Z404 712 aa16.92■□□□□ 0.3
COL4A2-205ENST00000478681 PNMA8AQ86V59 439 aaPredicted RBP16.92■□□□□ 0.3
COL4A2-205ENST00000478681 SUPT20HQ8NEM7 779 aa16.92■□□□□ 0.3
COL4A2-205ENST00000478681 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms