RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 POTEAQ6S8J7 498 aa9.2□□□□□ -0.94
HOXB3-209ENST00000478644 KDF1Q8NAX2 398 aaPredicted RBP9.2□□□□□ -0.94
HOXB3-209ENST00000478644 NGLY1Q96IV0 654 aa9.2□□□□□ -0.94
HOXB3-209ENST00000478644 NPHP3Q7Z494 1330 aa9.2□□□□□ -0.94
HOXB3-209ENST00000478644 ABCC11Q96J66 1382 aa9.2□□□□□ -0.94
HOXB3-209ENST00000478644 C1orf167Q5SNV9 1468 aa9.2□□□□□ -0.94
HOXB3-209ENST00000478644 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
HOXB3-209ENST00000478644 ADD1P35611 737 aaKnown RBP9.19□□□□□ -0.94
HOXB3-209ENST00000478644 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.19□□□□□ -0.94
HOXB3-209ENST00000478644 PCDHB9Q9Y5E1 797 aa9.19□□□□□ -0.94
HOXB3-209ENST00000478644 NHSL1Q5SYE7 1610 aa9.19□□□□□ -0.94
HOXB3-209ENST00000478644 PPLO60437 1756 aa9.19□□□□□ -0.94
HOXB3-209ENST00000478644 TECPR2O15040 1411 aa9.18□□□□□ -0.94
HOXB3-209ENST00000478644 ADH1AP07327 375 aa9.18□□□□□ -0.94
HOXB3-209ENST00000478644 LAMC1P11047 1609 aa9.18□□□□□ -0.94
HOXB3-209ENST00000478644 INSM1Q01101 510 aaPredicted RBP9.18□□□□□ -0.94
HOXB3-209ENST00000478644 DHX57Q6P158 1386 aaKnown RBP9.18□□□□□ -0.94
HOXB3-209ENST00000478644 ZNF330Q9Y3S2 320 aaPredicted RBP9.18□□□□□ -0.94
HOXB3-209ENST00000478644 SPATA31E1Q6ZUB1 1445 aa9.17□□□□□ -0.94
HOXB3-209ENST00000478644 ROBO2Q9HCK4 1378 aa9.17□□□□□ -0.94
HOXB3-209ENST00000478644 ERBB4Q15303 1308 aa9.17□□□□□ -0.94
HOXB3-209ENST00000478644 VEGFBP49765 207 aa9.17□□□□□ -0.94
HOXB3-209ENST00000478644 RBM6P78332 1123 aaKnown RBP9.17□□□□□ -0.94
HOXB3-209ENST00000478644 RGL3Q3MIN7 710 aa9.17□□□□□ -0.94
HOXB3-209ENST00000478644 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
HOXB3-209ENST00000478644 AGBL1Q96MI9 1066 aa9.17□□□□□ -0.94
HOXB3-209ENST00000478644 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
HOXB3-209ENST00000478644 PPFIA3O75145 1194 aa9.16□□□□□ -0.94
HOXB3-209ENST00000478644 GMPRP36959 345 aa9.16□□□□□ -0.94
HOXB3-209ENST00000478644 PTGIRP43119 386 aa9.16□□□□□ -0.94
HOXB3-209ENST00000478644 PSME1Q06323 249 aa9.16□□□□□ -0.94
HOXB3-209ENST00000478644 ESCO1Q5FWF5 840 aa9.16□□□□□ -0.94
HOXB3-209ENST00000478644 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
HOXB3-209ENST00000478644 PIK3C2GO75747 1445 aa9.15□□□□□ -0.94
HOXB3-209ENST00000478644 PNPLA6Q8IY17 1366 aa9.15□□□□□ -0.94
HOXB3-209ENST00000478644 AFF2P51816 1311 aa9.15□□□□□ -0.94
HOXB3-209ENST00000478644 ADGRF5Q8IZF2 1346 aa9.15□□□□□ -0.94
HOXB3-209ENST00000478644 SETD1AO15047 1707 aaKnown RBP9.15□□□□□ -0.94
HOXB3-209ENST00000478644 CTSOP43234 321 aaPredicted RBP9.15□□□□□ -0.94
HOXB3-209ENST00000478644 RAB15P59190 212 aa9.15□□□□□ -0.94
HOXB3-209ENST00000478644 QTRT2Q9H974 415 aaKnown RBP9.15□□□□□ -0.94
HOXB3-209ENST00000478644 NALCNQ8IZF0 1738 aa9.14□□□□□ -0.95
HOXB3-209ENST00000478644 EIF3AQ14152 1382 aaKnown RBP9.14□□□□□ -0.95
HOXB3-209ENST00000478644 LRP6O75581 1613 aa9.14□□□□□ -0.95
HOXB3-209ENST00000478644 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
HOXB3-209ENST00000478644 RELBQ01201 579 aa9.14□□□□□ -0.95
HOXB3-209ENST00000478644 INSM2Q96T92 566 aaPredicted RBP9.14□□□□□ -0.95
HOXB3-209ENST00000478644 PRM3Q9NNZ6 103 aa9.14□□□□□ -0.95
HOXB3-209ENST00000478644 TRPC5Q9UL62 973 aaPredicted RBP9.14□□□□□ -0.95
HOXB3-209ENST00000478644 MYOM2P54296 1465 aa9.14□□□□□ -0.95
HOXB3-209ENST00000478644 YTHDC2Q9H6S0 1430 aaKnown RBP9.14□□□□□ -0.95
HOXB3-209ENST00000478644 PTSQ03393 145 aa9.13□□□□□ -0.95
HOXB3-209ENST00000478644 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
HOXB3-209ENST00000478644 C8orf37Q96NL8 207 aa9.13□□□□□ -0.95
HOXB3-209ENST00000478644 ORAI2Q96SN7 254 aa9.13□□□□□ -0.95
HOXB3-209ENST00000478644 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
HOXB3-209ENST00000478644 TBC1D2BQ9UPU7 963 aa9.13□□□□□ -0.95
HOXB3-209ENST00000478644 KNDC1Q76NI1 1749 aa9.12□□□□□ -0.95
HOXB3-209ENST00000478644 SLC35F4A4IF30 521 aa9.12□□□□□ -0.95
HOXB3-209ENST00000478644 FIGNL2A6NMB9 653 aa9.12□□□□□ -0.95
HOXB3-209ENST00000478644 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
HOXB3-209ENST00000478644 IRF5Q13568 498 aa9.12□□□□□ -0.95
HOXB3-209ENST00000478644 RNF217Q8TC41 542 aa9.12□□□□□ -0.95
HOXB3-209ENST00000478644 ZNF395Q9H8N7 513 aaPredicted RBP9.12□□□□□ -0.95
HOXB3-209ENST00000478644 USP21Q9UK80 565 aa9.12□□□□□ -0.95
HOXB3-209ENST00000478644 NRXN1Q9ULB1 1477 aa9.12□□□□□ -0.95
HOXB3-209ENST00000478644 RAB3GAP2Q9H2M9 1393 aa9.12□□□□□ -0.95
HOXB3-209ENST00000478644 IFT172Q9UG01 1749 aa9.11□□□□□ -0.95
HOXB3-209ENST00000478644 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
HOXB3-209ENST00000478644 NANOS1Q8WY41 292 aaKnown RBP9.11□□□□□ -0.95
HOXB3-209ENST00000478644 CYLDQ9NQC7 956 aa9.11□□□□□ -0.95
HOXB3-209ENST00000478644 POGKQ9P215 609 aa9.11□□□□□ -0.95
HOXB3-209ENST00000478644 STK26Q9P289 416 aa9.11□□□□□ -0.95
HOXB3-209ENST00000478644 CEP126Q9P2H0 1117 aa9.11□□□□□ -0.95
HOXB3-209ENST00000478644 COL22A1Q8NFW1 1626 aaPredicted RBP9.11□□□□□ -0.95
HOXB3-209ENST00000478644 KIF1AQ12756 1690 aa9.1□□□□□ -0.95
HOXB3-209ENST00000478644 FOXO3O43524 673 aa9.1□□□□□ -0.95
HOXB3-209ENST00000478644 RNF144AP50876 292 aaPredicted RBP9.1□□□□□ -0.95
HOXB3-209ENST00000478644 FOXD4L5Q5VV16 416 aaPredicted RBP9.1□□□□□ -0.95
HOXB3-209ENST00000478644 DLC1Q96QB1 1528 aa9.1□□□□□ -0.95
HOXB3-209ENST00000478644 ANKARQ7Z5J8 1434 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 ATP5J2-PTCD1G3V325 749 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 TRAK2O60296 914 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 GPC1P35052 558 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 TMEM132EQ6IEE7 984 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 WAPLQ7Z5K2 1190 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 SBNO1A3KN83 1393 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 ARHGEF10O15013 1369 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
HOXB3-209ENST00000478644 ADAMTS2O95450 1211 aa9.08□□□□□ -0.96
HOXB3-209ENST00000478644 KRT28Q7Z3Y7 464 aa9.08□□□□□ -0.96
HOXB3-209ENST00000478644 PHTF2Q8N3S3 785 aa9.08□□□□□ -0.96
HOXB3-209ENST00000478644 CCDC155Q8N6L0 562 aa9.08□□□□□ -0.96
HOXB3-209ENST00000478644 POLMQ9NP87 494 aaPredicted RBP9.08□□□□□ -0.96
HOXB3-209ENST00000478644 PXDNQ92626 1479 aa9.08□□□□□ -0.96
HOXB3-209ENST00000478644 SPATA31A3Q5VYP0 1347 aa9.07□□□□□ -0.96
HOXB3-209ENST00000478644 SENP3-EIF4A1A0A087X0R7 540 aa9.07□□□□□ -0.96
HOXB3-209ENST00000478644 EIF4G2P78344 907 aaKnown RBP eCLIP9.07□□□□□ -0.96
HOXB3-209ENST00000478644 CFAP70Q5T0N1 1121 aa9.07□□□□□ -0.96
HOXB3-209ENST00000478644 DDX17Q92841 729 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms