RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ALDH16A1Q8IZ83 802 aa7.85□□□□□ -1.15
HPS3-205ENST00000478525 NACC1Q96RE7 527 aa7.85□□□□□ -1.15
HPS3-205ENST00000478525 TBC1D8BQ0IIM8 1120 aa7.84□□□□□ -1.15
HPS3-205ENST00000478525 BTLAQ7Z6A9 289 aa7.84□□□□□ -1.15
HPS3-205ENST00000478525 UBE2OQ9C0C9 1292 aaKnown RBP7.84□□□□□ -1.15
HPS3-205ENST00000478525 LILRB5O75023 590 aa7.83□□□□□ -1.16
HPS3-205ENST00000478525 C2orf49Q9BVC5 232 aaPredicted RBP7.83□□□□□ -1.16
HPS3-205ENST00000478525 SLC6A14Q9UN76 642 aa7.83□□□□□ -1.16
HPS3-205ENST00000478525 FLIIQ13045 1269 aa7.82□□□□□ -1.16
HPS3-205ENST00000478525 TRAPPC3LQ5T215 181 aa7.82□□□□□ -1.16
HPS3-205ENST00000478525 STAG2Q8N3U4 1231 aa7.82□□□□□ -1.16
HPS3-205ENST00000478525 NGLY1Q96IV0 654 aa7.82□□□□□ -1.16
HPS3-205ENST00000478525 NAGPAQ9UK23 515 aa7.82□□□□□ -1.16
HPS3-205ENST00000478525 ATAD2Q6PL18 1390 aa7.82□□□□□ -1.16
HPS3-205ENST00000478525 A0A0A0MRY4 1105 aa7.81□□□□□ -1.16
HPS3-205ENST00000478525 SCO2A0A1W2PP80 73 aa7.81□□□□□ -1.16
HPS3-205ENST00000478525 SELPP16109 830 aa7.81□□□□□ -1.16
HPS3-205ENST00000478525 MBTPS1Q14703 1052 aa7.81□□□□□ -1.16
HPS3-205ENST00000478525 SCG3Q8WXD2 468 aaKnown RBP7.81□□□□□ -1.16
HPS3-205ENST00000478525 IGFLR1Q9H665 355 aa7.81□□□□□ -1.16
HPS3-205ENST00000478525 JPH1Q9HDC5 661 aaPredicted RBP7.81□□□□□ -1.16
HPS3-205ENST00000478525 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
HPS3-205ENST00000478525 PRKCSHP14314 528 aaPredicted RBP7.8□□□□□ -1.16
HPS3-205ENST00000478525 ADGRE1Q14246 886 aa7.8□□□□□ -1.16
HPS3-205ENST00000478525 CHMP7Q8WUX9 453 aaPredicted RBP7.8□□□□□ -1.16
HPS3-205ENST00000478525 NUDT8Q8WV74 236 aa7.8□□□□□ -1.16
HPS3-205ENST00000478525 C9orf172C9J069 976 aa7.79□□□□□ -1.16
HPS3-205ENST00000478525 ELNP15502 786 aa7.79□□□□□ -1.16
HPS3-205ENST00000478525 RASA1P20936 1047 aa7.79□□□□□ -1.16
HPS3-205ENST00000478525 HIF1AQ16665 826 aa7.79□□□□□ -1.16
HPS3-205ENST00000478525 PRSS36Q5K4E3 855 aa7.79□□□□□ -1.16
HPS3-205ENST00000478525 DNAJB12Q9NXW2 375 aaKnown RBP7.79□□□□□ -1.16
HPS3-205ENST00000478525 SEC13P55735 322 aa7.78□□□□□ -1.16
HPS3-205ENST00000478525 IER5Q5VY09 327 aa7.78□□□□□ -1.16
HPS3-205ENST00000478525 PSAPL1Q6NUJ1 521 aa7.78□□□□□ -1.16
HPS3-205ENST00000478525 SHISA2Q6UWI4 295 aa7.78□□□□□ -1.16
HPS3-205ENST00000478525 GAS2L2Q8NHY3 880 aa7.78□□□□□ -1.16
HPS3-205ENST00000478525 GSX2Q9BZM3 304 aa7.78□□□□□ -1.16
HPS3-205ENST00000478525 BCS1LQ9Y276 419 aa7.78□□□□□ -1.16
HPS3-205ENST00000478525 MAFBQ9Y5Q3 323 aaPredicted RBP7.78□□□□□ -1.16
HPS3-205ENST00000478525 TGFBR3LH3BV60 316 aa7.77□□□□□ -1.17
HPS3-205ENST00000478525 LGR5O75473 907 aa7.77□□□□□ -1.17
HPS3-205ENST00000478525 NFKB1P19838 968 aa7.77□□□□□ -1.17
HPS3-205ENST00000478525 GRNP28799 593 aaKnown RBP7.77□□□□□ -1.17
HPS3-205ENST00000478525 AFF1P51825 1210 aaKnown RBP7.77□□□□□ -1.17
HPS3-205ENST00000478525 RAC1P63000 192 aa7.77□□□□□ -1.17
HPS3-205ENST00000478525 RTN1Q16799 776 aa7.77□□□□□ -1.17
HPS3-205ENST00000478525 TXNRD3Q86VQ6 643 aa7.77□□□□□ -1.17
HPS3-205ENST00000478525 GLMNQ92990 594 aa7.77□□□□□ -1.17
HPS3-205ENST00000478525 EFCC1Q9HA90 598 aa7.77□□□□□ -1.17
HPS3-205ENST00000478525 DMGDHQ9UI17 866 aaKnown RBP7.77□□□□□ -1.17
HPS3-205ENST00000478525 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.17
HPS3-205ENST00000478525 CCINQ13939 588 aa7.76□□□□□ -1.17
HPS3-205ENST00000478525 FMR1NBQ8N0W7 255 aaPredicted RBP7.76□□□□□ -1.17
HPS3-205ENST00000478525 LENG1Q96BZ8 264 aaPredicted RBP7.76□□□□□ -1.17
HPS3-205ENST00000478525 PNMA5Q96PV4 448 aa7.76□□□□□ -1.17
HPS3-205ENST00000478525 TFIP11Q9UBB9 837 aaKnown RBP7.76□□□□□ -1.17
HPS3-205ENST00000478525 BTBD11A6QL63 1104 aa7.75□□□□□ -1.17
HPS3-205ENST00000478525 H2AFB1P0C5Y9 115 aa7.75□□□□□ -1.17
HPS3-205ENST00000478525 H2AFB2P0C5Z0 115 aa7.75□□□□□ -1.17
HPS3-205ENST00000478525 CRTC2Q53ET0 693 aaPredicted RBP7.75□□□□□ -1.17
HPS3-205ENST00000478525 ARTNQ5T4W7 220 aa7.75□□□□□ -1.17
HPS3-205ENST00000478525 ILDR2Q71H61 639 aa7.75□□□□□ -1.17
HPS3-205ENST00000478525 NRG1Q02297 640 aaPredicted RBP7.74□□□□□ -1.17
HPS3-205ENST00000478525 DMRTC2Q8IXT2 367 aaPredicted RBP7.74□□□□□ -1.17
HPS3-205ENST00000478525 CLUAP1Q96AJ1 413 aa7.74□□□□□ -1.17
HPS3-205ENST00000478525 HINFPQ9BQA5 517 aa7.74□□□□□ -1.17
HPS3-205ENST00000478525 ZFP64Q9NPA5 681 aa7.74□□□□□ -1.17
HPS3-205ENST00000478525 RGS9O75916 674 aaPredicted RBP7.73□□□□□ -1.17
HPS3-205ENST00000478525 IGFBP4P22692 258 aa7.73□□□□□ -1.17
HPS3-205ENST00000478525 DPYDQ12882 1025 aa7.73□□□□□ -1.17
HPS3-205ENST00000478525 PTK7Q13308 1070 aa7.73□□□□□ -1.17
HPS3-205ENST00000478525 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
HPS3-205ENST00000478525 FNBP4Q8N3X1 1017 aaPredicted RBP7.73□□□□□ -1.17
HPS3-205ENST00000478525 KLK14Q9P0G3 267 aa7.73□□□□□ -1.17
HPS3-205ENST00000478525 CPB1P15086 417 aa7.72□□□□□ -1.17
HPS3-205ENST00000478525 INPP5BP32019 993 aa7.72□□□□□ -1.17
HPS3-205ENST00000478525 IDH3AP50213 366 aa7.72□□□□□ -1.17
HPS3-205ENST00000478525 LARP1Q6PKG0 1096 aaKnown RBP7.72□□□□□ -1.17
HPS3-205ENST00000478525 FAM35AQ86V20 835 aa7.72□□□□□ -1.17
HPS3-205ENST00000478525 PROSER2Q86WR7 435 aaPredicted RBP7.72□□□□□ -1.17
HPS3-205ENST00000478525 TP53INP1Q96A56 240 aa7.72□□□□□ -1.17
HPS3-205ENST00000478525 LPIN3Q9BQK8 851 aa7.72□□□□□ -1.17
HPS3-205ENST00000478525 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
HPS3-205ENST00000478525 ZFATQ9P243 1243 aa7.72□□□□□ -1.17
HPS3-205ENST00000478525 USP21Q9UK80 565 aa7.72□□□□□ -1.17
HPS3-205ENST00000478525 USP17L15C9J2P7 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L10C9JJH3 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L13C9JLJ4 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L12C9JPN9 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L11C9JVI0 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L21D6R901 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L18D6R9N7 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L22D6RA61 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L17D6RBQ6 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L19D6RCP7 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L20D6RJB6 530 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 EPB42P16452 691 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 PLAURQ03405 335 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 USP17L24Q0WX57 530 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms