RNA–Protein interactions for RNA: ENST00000478449.5

NCKAP1-205, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-205ENST00000478449 USP17L22D6RA61 530 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 USP17L17D6RBQ6 530 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 USP17L19D6RCP7 530 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 USP17L20D6RJB6 530 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 H3BM21 787 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 WIPF1O43516 503 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 SRPK2P78362 688 aaKnown RBP7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 USP17L24Q0WX57 530 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 ANKMY2Q8IV38 441 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 NPAS3Q8IXF0 933 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 IRF7Q92985 503 aa7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 ZSCAN10Q96SZ4 725 aaPredicted RBP7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 ARID4BQ4LE39 1312 aaPredicted RBP7.69□□□□□ -1.18
NCKAP1-205ENST00000478449 ABCC3O15438 1527 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 LMTK2Q8IWU2 1503 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 TMEM229AB2RXF0 380 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 IL2RAP01589 272 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 GMPRP36959 345 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 CTSOP43234 321 aaPredicted RBP7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 SCNN1DP51172 638 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 SMTNP53814 917 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 PDE4CQ08493 712 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 CRTC2Q53ET0 693 aaPredicted RBP7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 TMEM214Q6NUQ4 689 aaKnown RBP7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 SERTAD1Q9UHV2 236 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 DNMT3LQ9UJW3 386 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 RAB3GAP2Q9H2M9 1393 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 CNTLNQ9NXG0 1405 aa7.68□□□□□ -1.18
NCKAP1-205ENST00000478449 A6NJY4 79 aa7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 DPYDQ12882 1025 aa7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 TLR1Q15399 786 aa7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 GNASQ5JWF2 1037 aa7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 NBPF15Q8N660 670 aa7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 GRIP2Q9C0E4 1043 aa7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 ZNF358Q9NW07 568 aa7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 MADDQ8WXG6 1647 aa7.67□□□□□ -1.18
NCKAP1-205ENST00000478449 CDK2AP1O14519 115 aa7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 PDIA4P13667 645 aaKnown RBP7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 INSM1Q01101 510 aaPredicted RBP7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 WDR44Q5JSH3 913 aa7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 HINFPQ9BQA5 517 aa7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 NOVA2Q9UNW9 492 aaKnown RBP7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 KIAA1024Q9UPX6 916 aa7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 HRH3Q9Y5N1 445 aa7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 ERBB4Q15303 1308 aa7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 ARHGAP31Q2M1Z3 1444 aa7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 IQGAP3Q86VI3 1631 aa7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 ZC3H13Q5T200 1668 aaKnown RBP7.66□□□□□ -1.18
NCKAP1-205ENST00000478449 NUP155O75694 1391 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 CSB-PGBD3P0DP91 1061 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 PZPP20742 1482 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 MLECQ14165 292 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 MTFR1Q15390 333 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 EFCAB6Q5THR3 1501 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 GGT6Q6P531 493 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 PRICKLE2Q7Z3G6 844 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 GAS2L2Q8NHY3 880 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 RNF217Q8TC41 542 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 CHMP3Q9Y3E7 222 aa7.65□□□□□ -1.18
NCKAP1-205ENST00000478449 MROH2AA6NES4 1674 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 PTPRMP28827 1452 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 KANK1Q14678 1352 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 WASHC2CQ9Y4E1 1318 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 SFI1A8K8P3 1242 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 SPATA31C2B4DYI2 1134 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 SWI5Q1ZZU3 235 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 FOXD4L5Q5VV16 416 aaPredicted RBP7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 TAS1R3Q7RTX0 852 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 RHBDD1Q8TEB9 315 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 FER1L4A9Z1Z3 1794 aa7.64□□□□□ -1.19
NCKAP1-205ENST00000478449 RPRD2Q5VT52 1461 aaKnown RBP7.63□□□□□ -1.19
NCKAP1-205ENST00000478449 NPATQ14207 1427 aa7.63□□□□□ -1.19
NCKAP1-205ENST00000478449 ZMYM3Q14202 1370 aa7.63□□□□□ -1.19
NCKAP1-205ENST00000478449 STAU1O95793 577 aaKnown RBP7.63□□□□□ -1.19
NCKAP1-205ENST00000478449 NIFKQ9BYG3 293 aaKnown RBP7.63□□□□□ -1.19
NCKAP1-205ENST00000478449 FHDC1Q9C0D6 1143 aaPredicted RBP7.63□□□□□ -1.19
NCKAP1-205ENST00000478449 TET3O43151 1660 aa7.63□□□□□ -1.19
NCKAP1-205ENST00000478449 DKK1O94907 266 aa7.62□□□□□ -1.19
NCKAP1-205ENST00000478449 PTSQ03393 145 aa7.62□□□□□ -1.19
NCKAP1-205ENST00000478449 SCHIP1Q9P0W5 487 aaPredicted RBP7.62□□□□□ -1.19
NCKAP1-205ENST00000478449 CLTCQ00610 1675 aaKnown RBP7.62□□□□□ -1.19
NCKAP1-205ENST00000478449 CAMSAP1Q5T5Y3 1602 aa7.62□□□□□ -1.19
NCKAP1-205ENST00000478449 NOS1P29475 1434 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 RIMS1Q86UR5 1692 aaKnown RBP7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 POU4F2Q12837 409 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 TNS4Q8IZW8 715 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 TSEN2Q8NCE0 465 aaKnown RBP7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 PCGF6Q9BYE7 350 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 PODXL2Q9NZ53 605 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 SPATA31D1Q6ZQQ2 1576 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 ERVK-7P63135 1459 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 CEP152O94986 1710 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 PTPRTO14522 1441 aa7.61□□□□□ -1.19
NCKAP1-205ENST00000478449 RETREG2Q8NC44 543 aa7.6□□□□□ -1.19
NCKAP1-205ENST00000478449 TRAIPQ9BWF2 469 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms