RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SAMD9LQ8IVG5 1584 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-208ENST00000478423 SMARCE1Q969G3 411 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 MYO5CQ9NQX4 1742 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 ANAPC15P60006 121 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 ADGBQ8N7X0 1667 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 CCDC183Q5T5S1 534 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 LRRC2Q9BYS8 371 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 ORC3Q9UBD5 711 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-208ENST00000478423 C8orf37Q96NL8 207 aa16.6■□□□□ 0.25
NPHP4-208ENST00000478423 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
NPHP4-208ENST00000478423 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
NPHP4-208ENST00000478423 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-208ENST00000478423 TMEM67Q5HYA8 995 aa16.59■□□□□ 0.25
NPHP4-208ENST00000478423 CRACR2BQ8N4Y2 399 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-208ENST00000478423 BTG4Q9NY30 223 aa16.59■□□□□ 0.25
NPHP4-208ENST00000478423 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
NPHP4-208ENST00000478423 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
NPHP4-208ENST00000478423 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
NPHP4-208ENST00000478423 CCDC144CPQ8IYA2 1237 aa16.59■□□□□ 0.25
NPHP4-208ENST00000478423 BABAM1Q9NWV8 329 aa16.59■□□□□ 0.25
NPHP4-208ENST00000478423 CEP131Q9UPN4 1083 aa16.59■□□□□ 0.25
NPHP4-208ENST00000478423 MAGI2Q86UL8 1455 aa16.58■□□□□ 0.25
NPHP4-208ENST00000478423 IARSP41252 1262 aaKnown RBP16.58■□□□□ 0.25
NPHP4-208ENST00000478423 PPFIBP1Q86W92 1011 aa16.58■□□□□ 0.25
NPHP4-208ENST00000478423 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.25
NPHP4-208ENST00000478423 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-208ENST00000478423 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-208ENST00000478423 ARGLU1Q9NWB6 273 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-208ENST00000478423 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-208ENST00000478423 RNF123Q5XPI4 1314 aa16.58■□□□□ 0.24
NPHP4-208ENST00000478423 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.24
NPHP4-208ENST00000478423 MCMDC2Q4G0Z9 681 aa16.58■□□□□ 0.24
NPHP4-208ENST00000478423 CT47A1Q5JQC4 288 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-208ENST00000478423 DDX17Q92841 729 aaKnown RBP16.58■□□□□ 0.24
NPHP4-208ENST00000478423 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
NPHP4-208ENST00000478423 ANKRD18AQ8IVF6 992 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 BLMP54132 1417 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-208ENST00000478423 HOXB7P09629 217 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 MFSD6Q6ZSS7 791 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 BMP2KQ9NSY1 1161 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-208ENST00000478423 INSRP06213 1382 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 SLC9C2Q5TAH2 1124 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 NLRP3Q96P20 1036 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 MCM5P33992 734 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
NPHP4-208ENST00000478423 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-208ENST00000478423 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
NPHP4-208ENST00000478423 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-208ENST00000478423 LDHCP07864 332 aa16.56■□□□□ 0.24
NPHP4-208ENST00000478423 ZNHIT6Q9NWK9 470 aaKnown RBP16.56■□□□□ 0.24
NPHP4-208ENST00000478423 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
NPHP4-208ENST00000478423 SNX21Q969T3 373 aa16.56■□□□□ 0.24
NPHP4-208ENST00000478423 TTC37Q6PGP7 1564 aa16.56■□□□□ 0.24
NPHP4-208ENST00000478423 CHMLP26374 656 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 SSRP1Q08945 709 aaKnown RBP16.55■□□□□ 0.24
NPHP4-208ENST00000478423 UGGT1Q9NYU2 1555 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 PAG1Q9NWQ8 432 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 METP08581 1390 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 KLF18A0A0U1RQI7 1052 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 TFCP2Q12800 502 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 USP19O94966 1318 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 TSPY2A6NKD2 308 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 SMTNL1A8MU46 457 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-208ENST00000478423 METAP2P50579 478 aaKnown RBP eCLIP16.55■□□□□ 0.24
NPHP4-208ENST00000478423 FSIP1Q8NA03 581 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 ANO10Q9NW15 660 aa16.55■□□□□ 0.24
NPHP4-208ENST00000478423 CCP110O43303 1012 aa16.54■□□□□ 0.24
NPHP4-208ENST00000478423 CBFA2T2O43439 604 aa16.54■□□□□ 0.24
NPHP4-208ENST00000478423 KLHL40Q2TBA0 621 aa16.54■□□□□ 0.24
NPHP4-208ENST00000478423 BAG3O95817 575 aa16.54■□□□□ 0.24
NPHP4-208ENST00000478423 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
NPHP4-208ENST00000478423 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
NPHP4-208ENST00000478423 FAM89AQ96GI7 184 aa16.54■□□□□ 0.24
NPHP4-208ENST00000478423 TANGO6Q9C0B7 1094 aa16.54■□□□□ 0.24
NPHP4-208ENST00000478423 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-208ENST00000478423 CYP7A1P22680 504 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 FAM177A1Q8N128 213 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-208ENST00000478423 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 ZNF76P36508 570 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 CAGE1Q8TC20 777 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 ZNF496Q96IT1 587 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-208ENST00000478423 UTP14AQ9BVJ6 771 aaKnown RBP16.53■□□□□ 0.24
NPHP4-208ENST00000478423 MLH3Q9UHC1 1453 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 KLHL10Q6JEL2 608 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 ZSCAN30Q86W11 494 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
NPHP4-208ENST00000478423 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-208ENST00000478423 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
NPHP4-208ENST00000478423 ERVK-7P63135 1459 aa16.52■□□□□ 0.24
NPHP4-208ENST00000478423 A1BGP04217 495 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms