RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 GNAI3P08754 354 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 CCDC191Q8NCU4 936 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 LEO1Q8WVC0 666 aaPredicted RBP11.59□□□□□ -0.55
COL13A1-207ENST00000478219 ERCC4Q92889 916 aaPredicted RBP11.59□□□□□ -0.55
COL13A1-207ENST00000478219 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 JAKMIP1Q96N16 626 aaKnown RBP11.59□□□□□ -0.55
COL13A1-207ENST00000478219 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 TPCN1Q9ULQ1 816 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 ELP1O95163 1332 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 CHRM1P11229 460 aaPredicted RBP11.59□□□□□ -0.55
COL13A1-207ENST00000478219 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
COL13A1-207ENST00000478219 ZSCAN26Q16670 478 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 TEX2Q8IWB9 1127 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 PPP1R13BQ96KQ4 1090 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 TCEANC2Q96MN5 208 aa11.59□□□□□ -0.55
COL13A1-207ENST00000478219 CPSF1Q10570 1443 aaKnown RBP11.59□□□□□ -0.55
COL13A1-207ENST00000478219 LOC102724159A0A0B4J2E5 919 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 RRS1Q15050 365 aaKnown RBP11.58□□□□□ -0.56
COL13A1-207ENST00000478219 PWP2Q15269 919 aaKnown RBP11.58□□□□□ -0.56
COL13A1-207ENST00000478219 SARM1Q6SZW1 724 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 NBPF11Q86T75 865 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 REXO1L1PQ8IX06 675 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 PI4K2BQ8TCG2 481 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 FBXW7Q969H0 707 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 MRFAP1L1Q96HT8 127 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 UBXN6Q9BZV1 441 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL13A1-207ENST00000478219 GOLGA6L4A6NEF3 574 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 CHL1O00533 1208 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 OAS2P29728 719 aaKnown RBP11.58□□□□□ -0.56
COL13A1-207ENST00000478219 PRPF40BQ6NWY9 871 aaKnown RBP11.58□□□□□ -0.56
COL13A1-207ENST00000478219 CCDC34Q96HJ3 373 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 PRAM1Q96QH2 718 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 DDX19AQ9NUU7 478 aaKnown RBP11.58□□□□□ -0.56
COL13A1-207ENST00000478219 ORC3Q9UBD5 711 aaPredicted RBP11.58□□□□□ -0.56
COL13A1-207ENST00000478219 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 HECW2Q9P2P5 1572 aa11.58□□□□□ -0.56
COL13A1-207ENST00000478219 PIK3C2BO00750 1634 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 YTHDC2Q9H6S0 1430 aaKnown RBP11.57□□□□□ -0.56
COL13A1-207ENST00000478219 GOLGA6L19H0YKK7 550 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 LARP1Q6PKG0 1096 aaKnown RBP11.57□□□□□ -0.56
COL13A1-207ENST00000478219 DHX40Q8IX18 779 aaKnown RBP11.57□□□□□ -0.56
COL13A1-207ENST00000478219 BICD2Q8TD16 824 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 KIF20BQ96Q89 1820 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 NPATQ14207 1427 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 TBC1D8O95759 1140 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 HDGFL2Q7Z4V5 671 aaPredicted RBP11.57□□□□□ -0.56
COL13A1-207ENST00000478219 TXLNBQ8N3L3 684 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 ADCY9O60503 1353 aa11.57□□□□□ -0.56
COL13A1-207ENST00000478219 NPHP3Q7Z494 1330 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 HTATSF1O43719 755 aaKnown RBP11.56□□□□□ -0.56
COL13A1-207ENST00000478219 ATP8B2P98198 1209 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 LMOD3Q0VAK6 560 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 DDX11Q96FC9 970 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 NEMFO60524 1076 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 CASQ1P31415 396 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 VPS53Q5VIR6 699 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 RNF20Q5VTR2 975 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 ARMCX5Q6P1M9 558 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 SIRT1Q96EB6 747 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 CDK19Q9BWU1 502 aa11.56□□□□□ -0.56
COL13A1-207ENST00000478219 CEBPZQ03701 1054 aaKnown RBP11.55□□□□□ -0.56
COL13A1-207ENST00000478219 TSGA10IPQ3SY00 556 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 TEX35Q5T0J7 233 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 NME9Q86XW9 330 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 TAF6LQ9Y6J9 622 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 TPM4P67936 248 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 FOXR1Q6PIV2 292 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 SRLQ86TD4 932 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 FTOQ9C0B1 505 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL13A1-207ENST00000478219 TOMM22Q9NS69 142 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 KCND1Q9NSA2 647 aa11.55□□□□□ -0.56
COL13A1-207ENST00000478219 NEO1Q92859 1461 aa11.54□□□□□ -0.56
COL13A1-207ENST00000478219 CCT4P50991 539 aaKnown RBP11.54□□□□□ -0.56
COL13A1-207ENST00000478219 GTF2A1P52655 376 aaPredicted RBP11.54□□□□□ -0.56
COL13A1-207ENST00000478219 SMC1AQ14683 1233 aaKnown RBP11.54□□□□□ -0.56
COL13A1-207ENST00000478219 UBXN4Q92575 508 aa11.54□□□□□ -0.56
COL13A1-207ENST00000478219 NECTIN2Q92692 538 aa11.54□□□□□ -0.56
COL13A1-207ENST00000478219 DNAI1Q9UI46 699 aa11.54□□□□□ -0.56
COL13A1-207ENST00000478219 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
COL13A1-207ENST00000478219 EPB41L2O43491 1005 aaKnown RBP11.54□□□□□ -0.56
COL13A1-207ENST00000478219 SCAND2PQ9GZW5 306 aaPredicted RBP11.54□□□□□ -0.56
COL13A1-207ENST00000478219 RRP15Q9Y3B9 282 aaKnown RBP11.54□□□□□ -0.56
COL13A1-207ENST00000478219 CYP46A1Q9Y6A2 500 aa11.54□□□□□ -0.56
COL13A1-207ENST00000478219 TADA3O75528 432 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 STK3Q13188 491 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 AOPEPQ8N6M6 819 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 CARD6Q9BX69 1037 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 GOLPH3LQ9H4A5 285 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 YY1AP1Q9H869 796 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 SH2B1Q9NRF2 756 aaPredicted RBP11.53□□□□□ -0.56
COL13A1-207ENST00000478219 SLC52A1Q9NWF4 448 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 PTPRMP28827 1452 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 H3BQF6 201 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 LMAN1P49257 510 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms