RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 COL11A2P13942 1736 aaPredicted RBP21.03■□□□□ 0.96
PDZRN3-207ENST00000478209 ATP5J2-PTCD1G3V325 749 aa21.02■□□□□ 0.96
PDZRN3-207ENST00000478209 FKBP5Q13451 457 aaPredicted RBP21.02■□□□□ 0.96
PDZRN3-207ENST00000478209 TRMT2AQ8IZ69 625 aaKnown RBP21.02■□□□□ 0.96
PDZRN3-207ENST00000478209 MYD88Q99836 296 aa21.02■□□□□ 0.96
PDZRN3-207ENST00000478209 METTL22Q9BUU2 404 aaPredicted RBP21.02■□□□□ 0.96
PDZRN3-207ENST00000478209 TRMT112Q9UI30 125 aaKnown RBP21.02■□□□□ 0.96
PDZRN3-207ENST00000478209 MAP3K2Q9Y2U5 619 aa21.02■□□□□ 0.96
PDZRN3-207ENST00000478209 RIC1Q4ADV7 1423 aa21.02■□□□□ 0.96
PDZRN3-207ENST00000478209 PI4KAP2A4QPH2 592 aa21.01■□□□□ 0.95
PDZRN3-207ENST00000478209 TTLL6Q8N841 843 aa21.01■□□□□ 0.95
PDZRN3-207ENST00000478209 PI4KAP1Q8N8J0 262 aa21.01■□□□□ 0.95
PDZRN3-207ENST00000478209 ZNF428Q96B54 188 aa21.01■□□□□ 0.95
PDZRN3-207ENST00000478209 ADCY9O60503 1353 aa21■□□□□ 0.95
PDZRN3-207ENST00000478209 ARFGEF1Q9Y6D6 1849 aa21■□□□□ 0.95
PDZRN3-207ENST00000478209 SRGNP10124 158 aa21■□□□□ 0.95
PDZRN3-207ENST00000478209 NEXNQ0ZGT2 675 aa21■□□□□ 0.95
PDZRN3-207ENST00000478209 TRIM28Q13263 835 aaKnown RBP21■□□□□ 0.95
PDZRN3-207ENST00000478209 STYK1Q6J9G0 422 aa21■□□□□ 0.95
PDZRN3-207ENST00000478209 MASTLQ96GX5 879 aa21■□□□□ 0.95
PDZRN3-207ENST00000478209 SH3TC1Q8TE82 1336 aa21■□□□□ 0.95
PDZRN3-207ENST00000478209 TNRC6CQ9HCJ0 1690 aaKnown RBP20.99■□□□□ 0.95
PDZRN3-207ENST00000478209 KLRG2A4D1S0 409 aaPredicted RBP20.99■□□□□ 0.95
PDZRN3-207ENST00000478209 CT47B1P0C2W7 299 aaPredicted RBP20.99■□□□□ 0.95
PDZRN3-207ENST00000478209 NPR1P16066 1061 aa20.99■□□□□ 0.95
PDZRN3-207ENST00000478209 CNKSR1Q969H4 720 aa20.99■□□□□ 0.95
PDZRN3-207ENST00000478209 CCDC191Q8NCU4 936 aa20.98■□□□□ 0.95
PDZRN3-207ENST00000478209 ZBED9Q6R2W3 1325 aa20.98■□□□□ 0.95
PDZRN3-207ENST00000478209 CHD4Q14839 1912 aa20.98■□□□□ 0.95
PDZRN3-207ENST00000478209 SLC10A5Q5PT55 438 aa20.97■□□□□ 0.95
PDZRN3-207ENST00000478209 NLRP3Q96P20 1036 aa20.97■□□□□ 0.95
PDZRN3-207ENST00000478209 CRY2Q49AN0 593 aa20.96■□□□□ 0.95
PDZRN3-207ENST00000478209 DNAAF4Q8WXU2 420 aa20.96■□□□□ 0.95
PDZRN3-207ENST00000478209 RPGRQ92834 1020 aaKnown RBP20.96■□□□□ 0.95
PDZRN3-207ENST00000478209 CWC25Q9NXE8 425 aaPredicted RBP20.96■□□□□ 0.95
PDZRN3-207ENST00000478209 ARHGAP27Q6ZUM4 889 aa20.95■□□□□ 0.94
PDZRN3-207ENST00000478209 HCLS1P14317 486 aaPredicted RBP20.94■□□□□ 0.94
PDZRN3-207ENST00000478209 ALDH1B1P30837 517 aa20.94■□□□□ 0.94
PDZRN3-207ENST00000478209 ALDH1L2Q3SY69 923 aa20.94■□□□□ 0.94
PDZRN3-207ENST00000478209 MRPL50Q8N5N7 158 aaKnown RBP20.94■□□□□ 0.94
PDZRN3-207ENST00000478209 ZBTB38Q8NAP3 1195 aaPredicted RBP20.94■□□□□ 0.94
PDZRN3-207ENST00000478209 SSH1Q8WYL5 1049 aa20.94■□□□□ 0.94
PDZRN3-207ENST00000478209 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
PDZRN3-207ENST00000478209 CACNA1SQ13698 1873 aa20.94■□□□□ 0.94
PDZRN3-207ENST00000478209 HSP90B1P14625 803 aaKnown RBP20.93■□□□□ 0.94
PDZRN3-207ENST00000478209 YY1P25490 414 aa20.93■□□□□ 0.94
PDZRN3-207ENST00000478209 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
PDZRN3-207ENST00000478209 PRPF40BQ6NWY9 871 aaKnown RBP20.93■□□□□ 0.94
PDZRN3-207ENST00000478209 SYNE4Q8N205 404 aa20.93■□□□□ 0.94
PDZRN3-207ENST00000478209 SMC4Q9NTJ3 1288 aa20.93■□□□□ 0.94
PDZRN3-207ENST00000478209 PCCAP05165 728 aaPredicted RBP20.92■□□□□ 0.94
PDZRN3-207ENST00000478209 IGKV5-2P06315 115 aa20.92■□□□□ 0.94
PDZRN3-207ENST00000478209 RBM17Q96I25 401 aaKnown RBP20.92■□□□□ 0.94
PDZRN3-207ENST00000478209 BCL2L13Q9BXK5 485 aa20.92■□□□□ 0.94
PDZRN3-207ENST00000478209 NEURL1BA8MQ27 555 aa20.91■□□□□ 0.94
PDZRN3-207ENST00000478209 F6X3S4 739 aa20.91■□□□□ 0.94
PDZRN3-207ENST00000478209 IRS4O14654 1257 aaPredicted RBP20.91■□□□□ 0.94
PDZRN3-207ENST00000478209 CWF19L2Q2TBE0 894 aaKnown RBP20.91■□□□□ 0.94
PDZRN3-207ENST00000478209 C3orf67Q6ZVT6 689 aa20.91■□□□□ 0.94
PDZRN3-207ENST00000478209 SLX4Q8IY92 1834 aa20.91■□□□□ 0.94
PDZRN3-207ENST00000478209 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
PDZRN3-207ENST00000478209 ZNF219Q9P2Y4 722 aaPredicted RBP20.91■□□□□ 0.94
PDZRN3-207ENST00000478209 LAMB2P55268 1798 aa20.9■□□□□ 0.94
PDZRN3-207ENST00000478209 DDX60Q8IY21 1712 aaKnown RBP20.9■□□□□ 0.94
PDZRN3-207ENST00000478209 PTPRCP08575 1304 aa20.9■□□□□ 0.94
PDZRN3-207ENST00000478209 C21orf2O43822 256 aa20.9■□□□□ 0.94
PDZRN3-207ENST00000478209 HOXA10P31260 410 aaPredicted RBP20.9■□□□□ 0.94
PDZRN3-207ENST00000478209 SOGA3Q5TF21 947 aa20.9■□□□□ 0.94
PDZRN3-207ENST00000478209 CRAMP1Q96RY5 1269 aa20.9■□□□□ 0.94
PDZRN3-207ENST00000478209 CDHR2Q9BYE9 1310 aa20.88■□□□□ 0.93
PDZRN3-207ENST00000478209 GCKRQ14397 625 aa20.87■□□□□ 0.93
PDZRN3-207ENST00000478209 SLC4A10Q6U841 1118 aa20.87■□□□□ 0.93
PDZRN3-207ENST00000478209 DDX46Q7L014 1031 aaKnown RBP20.87■□□□□ 0.93
PDZRN3-207ENST00000478209 PDE8AO60658 829 aa20.86■□□□□ 0.93
PDZRN3-207ENST00000478209 SF3B3Q15393 1217 aaKnown RBP20.86■□□□□ 0.93
PDZRN3-207ENST00000478209 CCDC93Q567U6 631 aa20.86■□□□□ 0.93
PDZRN3-207ENST00000478209 BEND3Q5T5X7 828 aa20.86■□□□□ 0.93
PDZRN3-207ENST00000478209 JARID2Q92833 1246 aaPredicted RBP20.86■□□□□ 0.93
PDZRN3-207ENST00000478209 ABCC4O15439 1325 aa20.85■□□□□ 0.93
PDZRN3-207ENST00000478209 RARSP54136 660 aaKnown RBP20.85■□□□□ 0.93
PDZRN3-207ENST00000478209 RASSF7Q02833 373 aa20.85■□□□□ 0.93
PDZRN3-207ENST00000478209 UBE3BQ7Z3V4 1068 aa20.85■□□□□ 0.93
PDZRN3-207ENST00000478209 H7C1W4 665 aa20.84■□□□□ 0.93
PDZRN3-207ENST00000478209 PPEF1O14829 653 aaPredicted RBP20.84■□□□□ 0.93
PDZRN3-207ENST00000478209 ALDH1L1O75891 902 aa20.84■□□□□ 0.93
PDZRN3-207ENST00000478209 BRPF1P55201 1214 aaPredicted RBP20.84■□□□□ 0.93
PDZRN3-207ENST00000478209 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
PDZRN3-207ENST00000478209 SRCIN1Q9C0H9 1055 aa20.84■□□□□ 0.93
PDZRN3-207ENST00000478209 TMX4Q9H1E5 349 aaPredicted RBP20.84■□□□□ 0.93
PDZRN3-207ENST00000478209 KIF16BQ96L93 1317 aa20.83■□□□□ 0.93
PDZRN3-207ENST00000478209 NFKBIEO00221 500 aa20.83■□□□□ 0.93
PDZRN3-207ENST00000478209 GRAPQ13588 217 aa20.83■□□□□ 0.93
PDZRN3-207ENST00000478209 CC2D2BQ6DHV5 1058 aa20.83■□□□□ 0.93
PDZRN3-207ENST00000478209 GRAPLQ8TC17 118 aaPredicted RBP20.83■□□□□ 0.93
PDZRN3-207ENST00000478209 TAOK3Q9H2K8 898 aa20.83■□□□□ 0.93
PDZRN3-207ENST00000478209 FER1L6Q2WGJ9 1857 aa20.83■□□□□ 0.92
PDZRN3-207ENST00000478209 CCDC152Q4G0S7 254 aa20.82■□□□□ 0.92
PDZRN3-207ENST00000478209 C9orf131Q5VYM1 1079 aa20.82■□□□□ 0.92
PDZRN3-207ENST00000478209 RTKN2Q8IZC4 609 aa20.82■□□□□ 0.92
PDZRN3-207ENST00000478209 RNF181Q9P0P0 153 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms