RNA–Protein interactions for RNA: ENST00000477905.1

LRRC42-205, Transcript of leucine rich repeat containing 42, humanhuman

TSL 2

Gene LRRC42, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-205ENST00000477905 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
LRRC42-205ENST00000477905 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
LRRC42-205ENST00000477905 DBF4Q9UBU7 674 aaPredicted RBP17.41■□□□□ 0.38
LRRC42-205ENST00000477905 CACNA1SQ13698 1873 aa17.4■□□□□ 0.38
LRRC42-205ENST00000477905 EIF2S2P20042 333 aaKnown RBP17.4■□□□□ 0.38
LRRC42-205ENST00000477905 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
LRRC42-205ENST00000477905 TRIM28Q13263 835 aaKnown RBP17.4■□□□□ 0.38
LRRC42-205ENST00000477905 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
LRRC42-205ENST00000477905 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
LRRC42-205ENST00000477905 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
LRRC42-205ENST00000477905 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
LRRC42-205ENST00000477905 SMC1BQ8NDV3 1235 aa17.4■□□□□ 0.38
LRRC42-205ENST00000477905 APAF1O14727 1248 aa17.39■□□□□ 0.37
LRRC42-205ENST00000477905 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
LRRC42-205ENST00000477905 NLRP10Q86W26 655 aa17.39■□□□□ 0.37
LRRC42-205ENST00000477905 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
LRRC42-205ENST00000477905 VPS33BQ9H267 617 aa17.39■□□□□ 0.37
LRRC42-205ENST00000477905 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
LRRC42-205ENST00000477905 FZD9O00144 591 aa17.38■□□□□ 0.37
LRRC42-205ENST00000477905 GPTP24298 496 aa17.38■□□□□ 0.37
LRRC42-205ENST00000477905 GNAI1P63096 354 aa17.38■□□□□ 0.37
LRRC42-205ENST00000477905 C16orf71Q8IYS4 520 aaPredicted RBP17.38■□□□□ 0.37
LRRC42-205ENST00000477905 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
LRRC42-205ENST00000477905 ISCA1Q9BUE6 129 aa17.38■□□□□ 0.37
LRRC42-205ENST00000477905 UTP14AQ9BVJ6 771 aaKnown RBP17.38■□□□□ 0.37
LRRC42-205ENST00000477905 ANXA1P04083 346 aa17.37■□□□□ 0.37
LRRC42-205ENST00000477905 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
LRRC42-205ENST00000477905 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
LRRC42-205ENST00000477905 HYPKQ9NX55 129 aa17.37■□□□□ 0.37
LRRC42-205ENST00000477905 CHPF2Q9P2E5 772 aa17.37■□□□□ 0.37
LRRC42-205ENST00000477905 SCN4AP35499 1836 aa17.37■□□□□ 0.37
LRRC42-205ENST00000477905 FAM177BA6PVY3 158 aa17.36■□□□□ 0.37
LRRC42-205ENST00000477905 C3orf67Q6ZVT6 689 aa17.36■□□□□ 0.37
LRRC42-205ENST00000477905 NLRP3Q96P20 1036 aa17.36■□□□□ 0.37
LRRC42-205ENST00000477905 RTFDC1Q9BY42 306 aaPredicted RBP17.36■□□□□ 0.37
LRRC42-205ENST00000477905 CHMP4AQ9BY43 222 aa17.36■□□□□ 0.37
LRRC42-205ENST00000477905 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
LRRC42-205ENST00000477905 ANKRD13DQ6ZTN6 518 aa17.35■□□□□ 0.37
LRRC42-205ENST00000477905 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
LRRC42-205ENST00000477905 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
LRRC42-205ENST00000477905 BBOX1O75936 387 aa17.34■□□□□ 0.37
LRRC42-205ENST00000477905 OLFM4Q6UX06 510 aa17.34■□□□□ 0.37
LRRC42-205ENST00000477905 SYNE4Q8N205 404 aa17.34■□□□□ 0.37
LRRC42-205ENST00000477905 JMYQ8N9B5 988 aa17.34■□□□□ 0.37
LRRC42-205ENST00000477905 RPGRQ92834 1020 aaKnown RBP17.34■□□□□ 0.37
LRRC42-205ENST00000477905 ATP6V0A2Q9Y487 856 aa17.34■□□□□ 0.37
LRRC42-205ENST00000477905 SH3TC1Q8TE82 1336 aa17.33■□□□□ 0.36
LRRC42-205ENST00000477905 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
LRRC42-205ENST00000477905 CCDC184Q52MB2 194 aa17.33■□□□□ 0.36
LRRC42-205ENST00000477905 LAMB2P55268 1798 aa17.33■□□□□ 0.36
LRRC42-205ENST00000477905 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.36
LRRC42-205ENST00000477905 IL16Q14005 1332 aa17.32■□□□□ 0.36
LRRC42-205ENST00000477905 IQCA1LA6NCM1 817 aa17.32■□□□□ 0.36
LRRC42-205ENST00000477905 SF3B3Q15393 1217 aaKnown RBP17.32■□□□□ 0.36
LRRC42-205ENST00000477905 ZNF277Q9NRM2 450 aaPredicted RBP17.32■□□□□ 0.36
LRRC42-205ENST00000477905 COL4A5P29400 1685 aa17.32■□□□□ 0.36
LRRC42-205ENST00000477905 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
LRRC42-205ENST00000477905 SP8Q8IXZ3 490 aa17.31■□□□□ 0.36
LRRC42-205ENST00000477905 GPC2Q8N158 579 aa17.31■□□□□ 0.36
LRRC42-205ENST00000477905 LRRC37AA6NMS7 1700 aa17.3■□□□□ 0.36
LRRC42-205ENST00000477905 ABCC4O15439 1325 aa17.3■□□□□ 0.36
LRRC42-205ENST00000477905 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
LRRC42-205ENST00000477905 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
LRRC42-205ENST00000477905 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
LRRC42-205ENST00000477905 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
LRRC42-205ENST00000477905 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
LRRC42-205ENST00000477905 KLRG1Q96E93 195 aa17.3■□□□□ 0.36
LRRC42-205ENST00000477905 TAF1DQ9H5J8 278 aaPredicted RBP17.3■□□□□ 0.36
LRRC42-205ENST00000477905 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
LRRC42-205ENST00000477905 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
LRRC42-205ENST00000477905 ZNF541Q9H0D2 1346 aa17.29■□□□□ 0.36
LRRC42-205ENST00000477905 C8orf58Q8NAV2 365 aa17.29■□□□□ 0.36
LRRC42-205ENST00000477905 TRMT112Q9UI30 125 aaKnown RBP17.29■□□□□ 0.36
LRRC42-205ENST00000477905 CHADLQ6NUI6 762 aa17.28■□□□□ 0.36
LRRC42-205ENST00000477905 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
LRRC42-205ENST00000477905 PASKQ96RG2 1323 aa17.27■□□□□ 0.36
LRRC42-205ENST00000477905 GRAPQ13588 217 aa17.27■□□□□ 0.36
LRRC42-205ENST00000477905 GRAPLQ8TC17 118 aaPredicted RBP17.27■□□□□ 0.36
LRRC42-205ENST00000477905 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
LRRC42-205ENST00000477905 HCLS1P14317 486 aaPredicted RBP17.26■□□□□ 0.35
LRRC42-205ENST00000477905 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
LRRC42-205ENST00000477905 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
LRRC42-205ENST00000477905 SUPT20HQ8NEM7 779 aa17.26■□□□□ 0.35
LRRC42-205ENST00000477905 DUOX1Q9NRD9 1551 aa17.25■□□□□ 0.35
LRRC42-205ENST00000477905 ITGBL1O95965 494 aaPredicted RBP17.25■□□□□ 0.35
LRRC42-205ENST00000477905 PNMA8AQ86V59 439 aaPredicted RBP17.25■□□□□ 0.35
LRRC42-205ENST00000477905 ZBTB38Q8NAP3 1195 aaPredicted RBP17.25■□□□□ 0.35
LRRC42-205ENST00000477905 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
LRRC42-205ENST00000477905 HACL1Q9UJ83 578 aa17.25■□□□□ 0.35
LRRC42-205ENST00000477905 LTBP1Q14766 1721 aa17.24■□□□□ 0.35
LRRC42-205ENST00000477905 POTEIP0CG38 1075 aa17.24■□□□□ 0.35
LRRC42-205ENST00000477905 POTEJP0CG39 1038 aa17.24■□□□□ 0.35
LRRC42-205ENST00000477905 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
LRRC42-205ENST00000477905 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
LRRC42-205ENST00000477905 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
LRRC42-205ENST00000477905 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
LRRC42-205ENST00000477905 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
LRRC42-205ENST00000477905 CDHR2Q9BYE9 1310 aa17.23■□□□□ 0.35
LRRC42-205ENST00000477905 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
LRRC42-205ENST00000477905 SCNN1DP51172 638 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms