RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 ZNF837Q96EG3 531 aaPredicted RBP9.06□□□□□ -0.96
NUP58-210ENST00000477876 CEP170BQ9Y4F5 1589 aaPredicted RBP9.06□□□□□ -0.96
NUP58-210ENST00000477876 RTEL1-TNFRSF6BF6WH68 1400 aa9.05□□□□□ -0.96
NUP58-210ENST00000477876 ZNF142P52746 1687 aaPredicted RBP9.05□□□□□ -0.96
NUP58-210ENST00000477876 A6NJY4 79 aa9.05□□□□□ -0.96
NUP58-210ENST00000477876 CDK2AP1O14519 115 aa9.05□□□□□ -0.96
NUP58-210ENST00000477876 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
NUP58-210ENST00000477876 RNFT1Q5M7Z0 435 aa9.05□□□□□ -0.96
NUP58-210ENST00000477876 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.05□□□□□ -0.96
NUP58-210ENST00000477876 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
NUP58-210ENST00000477876 ADGBQ8N7X0 1667 aa9.04□□□□□ -0.96
NUP58-210ENST00000477876 PLA2R1Q13018 1463 aa9.04□□□□□ -0.96
NUP58-210ENST00000477876 NCOA2Q15596 1464 aa9.04□□□□□ -0.96
NUP58-210ENST00000477876 MTFR1Q15390 333 aa9.04□□□□□ -0.96
NUP58-210ENST00000477876 KANK4Q5T7N3 995 aaPredicted RBP9.04□□□□□ -0.96
NUP58-210ENST00000477876 NIFKQ9BYG3 293 aaKnown RBP9.04□□□□□ -0.96
NUP58-210ENST00000477876 ZNF358Q9NW07 568 aa9.04□□□□□ -0.96
NUP58-210ENST00000477876 DNMT1P26358 1616 aaKnown RBP9.04□□□□□ -0.96
NUP58-210ENST00000477876 EHBP1L1Q8N3D4 1523 aa9.04□□□□□ -0.96
NUP58-210ENST00000477876 CAMSAP2Q08AD1 1489 aa9.03□□□□□ -0.96
NUP58-210ENST00000477876 IQSEC2Q5JU85 1478 aa9.03□□□□□ -0.96
NUP58-210ENST00000477876 PALM3A6NDB9 673 aaPredicted RBP9.03□□□□□ -0.96
NUP58-210ENST00000477876 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
NUP58-210ENST00000477876 MSX1P28360 303 aa9.03□□□□□ -0.96
NUP58-210ENST00000477876 GTPBP3Q969Y2 492 aaKnown RBP9.03□□□□□ -0.96
NUP58-210ENST00000477876 PPP1R12CQ9BZL4 782 aa9.03□□□□□ -0.96
NUP58-210ENST00000477876 NUCKS1Q9H1E3 243 aaKnown RBP9.03□□□□□ -0.96
NUP58-210ENST00000477876 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
NUP58-210ENST00000477876 A2ML1A8K2U0 1454 aa9.02□□□□□ -0.96
NUP58-210ENST00000477876 CLDN10P78369 228 aa9.02□□□□□ -0.97
NUP58-210ENST00000477876 CCDC102BQ68D86 513 aa9.02□□□□□ -0.97
NUP58-210ENST00000477876 LARGE2Q8N3Y3 721 aa9.02□□□□□ -0.97
NUP58-210ENST00000477876 OGFOD1Q8N543 542 aa9.02□□□□□ -0.97
NUP58-210ENST00000477876 GPAMQ9HCL2 828 aa9.02□□□□□ -0.97
NUP58-210ENST00000477876 IQSEC3Q9UPP2 1182 aaPredicted RBP9.02□□□□□ -0.97
NUP58-210ENST00000477876 MAFBQ9Y5Q3 323 aaPredicted RBP9.02□□□□□ -0.97
NUP58-210ENST00000477876 NEURL4Q96JN8 1562 aa9.02□□□□□ -0.97
NUP58-210ENST00000477876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.01□□□□□ -0.97
NUP58-210ENST00000477876 GPR25O00155 361 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 CSB-PGBD3P0DP91 1061 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 PLA2G4AP47712 749 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 PGBD3Q8N328 593 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 TPCN2Q8NHX9 752 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 KIAA1024Q9UPX6 916 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 GTF3C3Q9Y5Q9 886 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 CCDC141Q6ZP82 1450 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 WASHC2CQ9Y4E1 1318 aa9.01□□□□□ -0.97
NUP58-210ENST00000477876 TNRQ92752 1358 aa9□□□□□ -0.97
NUP58-210ENST00000477876 GAS6Q14393 721 aa9□□□□□ -0.97
NUP58-210ENST00000477876 LBRQ14739 615 aaKnown RBP9□□□□□ -0.97
NUP58-210ENST00000477876 AIDAQ96BJ3 306 aa9□□□□□ -0.97
NUP58-210ENST00000477876 SCHIP1Q9P0W5 487 aaPredicted RBP9□□□□□ -0.97
NUP58-210ENST00000477876 PZPP20742 1482 aa9□□□□□ -0.97
NUP58-210ENST00000477876 MIA2Q96PC5 1412 aa8.99□□□□□ -0.97
NUP58-210ENST00000477876 SLURP2P0DP57 97 aa8.99□□□□□ -0.97
NUP58-210ENST00000477876 ZNF295-AS1Q8N0V1 137 aa8.99□□□□□ -0.97
NUP58-210ENST00000477876 C1orf216Q8TAB5 229 aa8.99□□□□□ -0.97
NUP58-210ENST00000477876 RUBCNLQ9H714 662 aa8.99□□□□□ -0.97
NUP58-210ENST00000477876 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
NUP58-210ENST00000477876 USP3Q9Y6I4 520 aa8.99□□□□□ -0.97
NUP58-210ENST00000477876 SPATA31D1Q6ZQQ2 1576 aa8.99□□□□□ -0.97
NUP58-210ENST00000477876 ALKQ9UM73 1620 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 LRRC9Q6ZRR7 1453 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 THBS1P07996 1170 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 RASA1P20936 1047 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 HSPA1LP34931 641 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 SRSF11Q05519 484 aaKnown RBP8.98□□□□□ -0.97
NUP58-210ENST00000477876 EFHC2Q5JST6 749 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 TNS4Q8IZW8 715 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 CFHR5Q9BXR6 569 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 ZMYND15Q9H091 742 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 RBM19Q9Y4C8 960 aaKnown RBP8.98□□□□□ -0.97
NUP58-210ENST00000477876 KDM5DQ9BY66 1539 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 ARHGEF5Q12774 1597 aa8.98□□□□□ -0.97
NUP58-210ENST00000477876 SHANK2Q9UPX8 1470 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 M0R2N6 131 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 EPHA4P54764 986 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 PIP4K2BP78356 416 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 FOXK2Q01167 660 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 SIX5Q8N196 739 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 CRISPLD1Q9H336 500 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 MBIPQ9NS73 344 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 VWDEQ8N2E2 1590 aa8.97□□□□□ -0.97
NUP58-210ENST00000477876 MROH1Q8NDA8 1641 aa8.96□□□□□ -0.98
NUP58-210ENST00000477876 DKK1O94907 266 aa8.96□□□□□ -0.98
NUP58-210ENST00000477876 ADAMTS2O95450 1211 aa8.96□□□□□ -0.98
NUP58-210ENST00000477876 TSPY4P0CV99 314 aa8.96□□□□□ -0.98
NUP58-210ENST00000477876 TSPY10P0CW01 314 aa8.96□□□□□ -0.98
NUP58-210ENST00000477876 LMOD1P29536 600 aaPredicted RBP8.96□□□□□ -0.98
NUP58-210ENST00000477876 NBPF1Q3BBV0 1214 aa8.96□□□□□ -0.98
NUP58-210ENST00000477876 LARP1Q6PKG0 1096 aaKnown RBP8.96□□□□□ -0.98
NUP58-210ENST00000477876 ANKLE2Q86XL3 938 aa8.96□□□□□ -0.98
NUP58-210ENST00000477876 THEMISQ8N1K5 641 aaPredicted RBP8.96□□□□□ -0.98
NUP58-210ENST00000477876 ZNF594Q96JF6 807 aaPredicted RBP8.96□□□□□ -0.98
NUP58-210ENST00000477876 VPS8Q8N3P4 1428 aa8.96□□□□□ -0.98
NUP58-210ENST00000477876 ABCC3O15438 1527 aa8.95□□□□□ -0.98
NUP58-210ENST00000477876 STRCP1A6NGW2 1772 aa8.95□□□□□ -0.98
NUP58-210ENST00000477876 ATP4AP20648 1035 aa8.95□□□□□ -0.98
NUP58-210ENST00000477876 UBAP2LQ14157 1087 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms