RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 BEGAINQ9BUH8 593 aa27.12■■□□□ 1.93
PDLIM1-202ENST00000477757 FMR1Q06787 632 aaKnown RBP eCLIP27.11■■□□□ 1.93
PDLIM1-202ENST00000477757 EPS15P42566 896 aa27.1■■□□□ 1.93
PDLIM1-202ENST00000477757 CYP4F22Q6NT55 531 aa27.1■■□□□ 1.93
PDLIM1-202ENST00000477757 PAXIP1Q6ZW49 1069 aaPredicted RBP27.1■■□□□ 1.93
PDLIM1-202ENST00000477757 MCM10Q7L590 875 aa27.1■■□□□ 1.93
PDLIM1-202ENST00000477757 RTF1Q92541 710 aaKnown RBP27.1■■□□□ 1.93
PDLIM1-202ENST00000477757 GPR101Q96P66 508 aaPredicted RBP27.1■■□□□ 1.93
PDLIM1-202ENST00000477757 NYXQ9GZU5 481 aa27.1■■□□□ 1.93
PDLIM1-202ENST00000477757 RGS19P49795 217 aa27.09■■□□□ 1.93
PDLIM1-202ENST00000477757 MLLT1Q03111 559 aaPredicted RBP27.09■■□□□ 1.93
PDLIM1-202ENST00000477757 GRIPAP1Q4V328 841 aa27.09■■□□□ 1.93
PDLIM1-202ENST00000477757 USP50Q70EL3 339 aaPredicted RBP27.09■■□□□ 1.93
PDLIM1-202ENST00000477757 IBTKQ9P2D0 1353 aaPredicted RBP27.09■■□□□ 1.93
PDLIM1-202ENST00000477757 CCDC85CA6NKD9 419 aa27.08■■□□□ 1.93
PDLIM1-202ENST00000477757 HOXA10P31260 410 aaPredicted RBP27.08■■□□□ 1.93
PDLIM1-202ENST00000477757 CST9Q5W186 159 aa27.08■■□□□ 1.93
PDLIM1-202ENST00000477757 TLL2Q9Y6L7 1015 aa27.08■■□□□ 1.93
PDLIM1-202ENST00000477757 TRAF5O00463 557 aa27.07■■□□□ 1.92
PDLIM1-202ENST00000477757 GRM1Q13255 1194 aa27.07■■□□□ 1.92
PDLIM1-202ENST00000477757 NUTM1Q86Y26 1132 aa27.07■■□□□ 1.92
PDLIM1-202ENST00000477757 LARGE2Q8N3Y3 721 aa27.07■■□□□ 1.92
PDLIM1-202ENST00000477757 RPGRQ92834 1020 aaKnown RBP27.06■■□□□ 1.92
PDLIM1-202ENST00000477757 NUP98P52948 1817 aa27.06■■□□□ 1.92
PDLIM1-202ENST00000477757 CFAP53Q96M91 514 aa27.05■■□□□ 1.92
PDLIM1-202ENST00000477757 ERVV-1B6SEH8 477 aa27.04■■□□□ 1.92
PDLIM1-202ENST00000477757 MAP2K2P36507 400 aa27.04■■□□□ 1.92
PDLIM1-202ENST00000477757 CNGB1Q14028 1251 aaPredicted RBP27.04■■□□□ 1.92
PDLIM1-202ENST00000477757 SLC51AQ86UW1 340 aa27.03■■□□□ 1.92
PDLIM1-202ENST00000477757 NIM1KQ8IY84 436 aa27.03■■□□□ 1.92
PDLIM1-202ENST00000477757 MAP3K15Q6ZN16 1313 aa27.02■■□□□ 1.92
PDLIM1-202ENST00000477757 PPEF1O14829 653 aaPredicted RBP27.02■■□□□ 1.92
PDLIM1-202ENST00000477757 HTATSF1O43719 755 aaKnown RBP27.02■■□□□ 1.92
PDLIM1-202ENST00000477757 DCTN1Q14203 1278 aa27.02■■□□□ 1.92
PDLIM1-202ENST00000477757 CRAMP1Q96RY5 1269 aa27.02■■□□□ 1.92
PDLIM1-202ENST00000477757 TSKSQ9UJT2 592 aa27.02■■□□□ 1.92
PDLIM1-202ENST00000477757 UBN2Q6ZU65 1347 aa27.01■■□□□ 1.91
PDLIM1-202ENST00000477757 CA12O43570 354 aa27.01■■□□□ 1.91
PDLIM1-202ENST00000477757 AOC2O75106 756 aa27.01■■□□□ 1.91
PDLIM1-202ENST00000477757 GPRC5DQ9NZD1 345 aa27.01■■□□□ 1.91
PDLIM1-202ENST00000477757 NUDCQ9Y266 331 aa27.01■■□□□ 1.91
PDLIM1-202ENST00000477757 KDM3BQ7LBC6 1761 aa27.01■■□□□ 1.91
PDLIM1-202ENST00000477757 SAPCD2Q86UD0 394 aa27■■□□□ 1.91
PDLIM1-202ENST00000477757 ADARB2Q9NS39 739 aaKnown RBP27■■□□□ 1.91
PDLIM1-202ENST00000477757 RBM17Q96I25 401 aaKnown RBP26.99■■□□□ 1.91
PDLIM1-202ENST00000477757 PPIP5K2O43314 1243 aa26.98■■□□□ 1.91
PDLIM1-202ENST00000477757 U2AF1L5P0DN76 240 aaPredicted RBP26.98■■□□□ 1.91
PDLIM1-202ENST00000477757 U2AF1Q01081 240 aaKnown RBP eCLIP26.98■■□□□ 1.91
PDLIM1-202ENST00000477757 TAF7Q15545 349 aaPredicted RBP26.98■■□□□ 1.91
PDLIM1-202ENST00000477757 KIF6Q6ZMV9 814 aa26.98■■□□□ 1.91
PDLIM1-202ENST00000477757 HHIPL1Q96JK4 782 aa26.98■■□□□ 1.91
PDLIM1-202ENST00000477757 TNRC18O15417 2968 aaPredicted RBP26.97■■□□□ 1.91
PDLIM1-202ENST00000477757 GPTP24298 496 aa26.97■■□□□ 1.91
PDLIM1-202ENST00000477757 BRPF1P55201 1214 aaPredicted RBP26.97■■□□□ 1.91
PDLIM1-202ENST00000477757 TTLL7Q6ZT98 887 aa26.97■■□□□ 1.91
PDLIM1-202ENST00000477757 VPS33BQ9H267 617 aa26.97■■□□□ 1.91
PDLIM1-202ENST00000477757 CELF2O95319 508 aaKnown RBP26.96■■□□□ 1.91
PDLIM1-202ENST00000477757 NTSR2O95665 410 aa26.96■■□□□ 1.91
PDLIM1-202ENST00000477757 AOC3Q16853 763 aa26.96■■□□□ 1.91
PDLIM1-202ENST00000477757 SUSD4Q5VX71 490 aa26.96■■□□□ 1.91
PDLIM1-202ENST00000477757 NGEFQ8N5V2 710 aa26.96■■□□□ 1.91
PDLIM1-202ENST00000477757 MCOLN1Q9GZU1 580 aa26.96■■□□□ 1.91
PDLIM1-202ENST00000477757 CDHR2Q9BYE9 1310 aa26.95■■□□□ 1.91
PDLIM1-202ENST00000477757 C3orf67Q6ZVT6 689 aa26.95■■□□□ 1.9
PDLIM1-202ENST00000477757 MIS18AQ9NYP9 233 aa26.95■■□□□ 1.9
PDLIM1-202ENST00000477757 TCERG1O14776 1098 aaKnown RBP26.94■■□□□ 1.9
PDLIM1-202ENST00000477757 ZBTB3Q9H5J0 574 aa26.94■■□□□ 1.9
PDLIM1-202ENST00000477757 PCDH10Q9P2E7 1040 aa26.94■■□□□ 1.9
PDLIM1-202ENST00000477757 CXCL9Q07325 125 aa26.93■■□□□ 1.9
PDLIM1-202ENST00000477757 ZNF34Q8IZ26 560 aa26.93■■□□□ 1.9
PDLIM1-202ENST00000477757 GLIS2Q9BZE0 524 aaPredicted RBP26.93■■□□□ 1.9
PDLIM1-202ENST00000477757 PGAP2Q9UHJ9 254 aa26.93■■□□□ 1.9
PDLIM1-202ENST00000477757 ZNRF3Q9ULT6 936 aa26.93■■□□□ 1.9
PDLIM1-202ENST00000477757 ATP6V0A2Q9Y487 856 aa26.93■■□□□ 1.9
PDLIM1-202ENST00000477757 GMPSP49915 693 aaPredicted RBP26.92■■□□□ 1.9
PDLIM1-202ENST00000477757 PNISRQ8TF01 805 aaKnown RBP26.91■■□□□ 1.9
PDLIM1-202ENST00000477757 RTFDC1Q9BY42 306 aaPredicted RBP26.91■■□□□ 1.9
PDLIM1-202ENST00000477757 TMX4Q9H1E5 349 aaPredicted RBP26.91■■□□□ 1.9
PDLIM1-202ENST00000477757 RRP7AQ9Y3A4 280 aaKnown RBP26.91■■□□□ 1.9
PDLIM1-202ENST00000477757 SUPT20HQ8NEM7 779 aa26.9■■□□□ 1.9
PDLIM1-202ENST00000477757 CCER1Q8TC90 406 aaPredicted RBP26.9■■□□□ 1.9
PDLIM1-202ENST00000477757 CASP8AP2Q9UKL3 1982 aa26.89■■□□□ 1.9
PDLIM1-202ENST00000477757 MYL6BP14649 208 aa26.89■■□□□ 1.9
PDLIM1-202ENST00000477757 GIGYF2Q6Y7W6 1299 aaKnown RBP26.89■■□□□ 1.9
PDLIM1-202ENST00000477757 ZC3H15Q8WU90 426 aaKnown RBP26.89■■□□□ 1.9
PDLIM1-202ENST00000477757 CFAP44Q96MT7 982 aa26.89■■□□□ 1.9
PDLIM1-202ENST00000477757 EIF4A1P60842 406 aaKnown RBP26.88■■□□□ 1.89
PDLIM1-202ENST00000477757 PARP10Q53GL7 1025 aa26.88■■□□□ 1.89
PDLIM1-202ENST00000477757 PPP1R42Q7Z4L9 355 aa26.88■■□□□ 1.89
PDLIM1-202ENST00000477757 NLRP3Q96P20 1036 aa26.88■■□□□ 1.89
PDLIM1-202ENST00000477757 DLG5Q8TDM6 1919 aa26.88■■□□□ 1.89
PDLIM1-202ENST00000477757 ABCC4O15439 1325 aa26.88■■□□□ 1.89
PDLIM1-202ENST00000477757 ERBB4Q15303 1308 aa26.88■■□□□ 1.89
PDLIM1-202ENST00000477757 PPP2R1AP30153 589 aa26.87■■□□□ 1.89
PDLIM1-202ENST00000477757 DGKZQ13574 1117 aa26.87■■□□□ 1.89
PDLIM1-202ENST00000477757 CIAPIN1Q6FI81 312 aa26.87■■□□□ 1.89
PDLIM1-202ENST00000477757 ZNF408Q9H9D4 720 aa26.86■■□□□ 1.89
PDLIM1-202ENST00000477757 LAMB2P55268 1798 aa26.85■■□□□ 1.89
PDLIM1-202ENST00000477757 HIRAP54198 1017 aaPredicted RBP26.85■■□□□ 1.89
PDLIM1-202ENST00000477757 KIAA2012Q0VF49 1180 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms