RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 PDZRN3Q9UPQ7 1066 aa28.77■■■□□ 2.2
SF1-214ENST00000477596 SLX4Q8IY92 1834 aa28.77■■■□□ 2.2
SF1-214ENST00000477596 C3orf67Q6ZVT6 689 aa28.76■■■□□ 2.19
SF1-214ENST00000477596 RIC3Q7Z5B4 369 aa28.76■■■□□ 2.19
SF1-214ENST00000477596 ZNF219Q9P2Y4 722 aaPredicted RBP28.76■■■□□ 2.19
SF1-214ENST00000477596 RIC1Q4ADV7 1423 aa28.76■■■□□ 2.19
SF1-214ENST00000477596 STYK1Q6J9G0 422 aa28.75■■■□□ 2.19
SF1-214ENST00000477596 SYNE4Q8N205 404 aa28.75■■■□□ 2.19
SF1-214ENST00000477596 MASTLQ96GX5 879 aa28.75■■■□□ 2.19
SF1-214ENST00000477596 ISCA1Q9BUE6 129 aa28.75■■■□□ 2.19
SF1-214ENST00000477596 CHMP4AQ9BY43 222 aa28.75■■■□□ 2.19
SF1-214ENST00000477596 SLC4A2P04920 1241 aa28.73■■■□□ 2.19
SF1-214ENST00000477596 CDCA7LQ96GN5 454 aa28.73■■■□□ 2.19
SF1-214ENST00000477596 ADCY9O60503 1353 aa28.73■■■□□ 2.19
SF1-214ENST00000477596 NPR1P16066 1061 aa28.72■■■□□ 2.19
SF1-214ENST00000477596 RASSF7Q02833 373 aa28.72■■■□□ 2.19
SF1-214ENST00000477596 PRPF40BQ6NWY9 871 aaKnown RBP28.72■■■□□ 2.19
SF1-214ENST00000477596 MYD88Q99836 296 aa28.72■■■□□ 2.19
SF1-214ENST00000477596 LAMB2P55268 1798 aa28.72■■■□□ 2.19
SF1-214ENST00000477596 CRY2Q49AN0 593 aa28.71■■■□□ 2.19
SF1-214ENST00000477596 CNKSR1Q969H4 720 aa28.71■■■□□ 2.19
SF1-214ENST00000477596 TRMT112Q9UI30 125 aaKnown RBP28.71■■■□□ 2.19
SF1-214ENST00000477596 E9PSI1 815 aa28.7■■■□□ 2.18
SF1-214ENST00000477596 C21orf2O43822 256 aa28.7■■■□□ 2.18
SF1-214ENST00000477596 SLFN5Q08AF3 891 aa28.7■■■□□ 2.18
SF1-214ENST00000477596 ZNF784Q8NCA9 323 aaPredicted RBP28.7■■■□□ 2.18
SF1-214ENST00000477596 MAP3K2Q9Y2U5 619 aa28.7■■■□□ 2.18
SF1-214ENST00000477596 DDX60Q8IY21 1712 aaKnown RBP28.69■■■□□ 2.18
SF1-214ENST00000477596 DDX58O95786 925 aaKnown RBP28.69■■■□□ 2.18
SF1-214ENST00000477596 HCLS1P14317 486 aaPredicted RBP28.69■■■□□ 2.18
SF1-214ENST00000477596 RNF123Q5XPI4 1314 aa28.69■■■□□ 2.18
SF1-214ENST00000477596 SH3TC1Q8TE82 1336 aa28.69■■■□□ 2.18
SF1-214ENST00000477596 PI4KAP2A4QPH2 592 aa28.68■■■□□ 2.18
SF1-214ENST00000477596 FLIIQ13045 1269 aa28.68■■■□□ 2.18
SF1-214ENST00000477596 PI4KAP1Q8N8J0 262 aa28.68■■■□□ 2.18
SF1-214ENST00000477596 CACNA1FO60840 1977 aa28.68■■■□□ 2.18
SF1-214ENST00000477596 RTL5Q5HYW3 569 aaPredicted RBP28.67■■■□□ 2.18
SF1-214ENST00000477596 KSR2Q6VAB6 950 aa28.67■■■□□ 2.18
SF1-214ENST00000477596 METTL22Q9BUU2 404 aaPredicted RBP28.67■■■□□ 2.18
SF1-214ENST00000477596 SBF1O95248 1867 aa28.66■■■□□ 2.18
SF1-214ENST00000477596 NFKBIEO00221 500 aa28.66■■■□□ 2.18
SF1-214ENST00000477596 SLC10A5Q5PT55 438 aa28.66■■■□□ 2.18
SF1-214ENST00000477596 SLC51AQ86UW1 340 aa28.66■■■□□ 2.18
SF1-214ENST00000477596 FAM89AQ96GI7 184 aa28.66■■■□□ 2.18
SF1-214ENST00000477596 PRELPP51888 382 aa28.65■■■□□ 2.18
SF1-214ENST00000477596 TRIM28Q13263 835 aaKnown RBP28.65■■■□□ 2.18
SF1-214ENST00000477596 OLFM4Q6UX06 510 aa28.65■■■□□ 2.18
SF1-214ENST00000477596 RPGRQ92834 1020 aaKnown RBP28.65■■■□□ 2.18
SF1-214ENST00000477596 FER1L6Q2WGJ9 1857 aa28.65■■■□□ 2.18
SF1-214ENST00000477596 C9orf131Q5VYM1 1079 aa28.64■■■□□ 2.18
SF1-214ENST00000477596 FKBP5Q13451 457 aaPredicted RBP28.63■■■□□ 2.17
SF1-214ENST00000477596 C7orf43Q8WVR3 580 aa28.63■■■□□ 2.17
SF1-214ENST00000477596 NLRP3Q96P20 1036 aa28.63■■■□□ 2.17
SF1-214ENST00000477596 IGKV5-2P06315 115 aa28.62■■■□□ 2.17
SF1-214ENST00000477596 HOXA10P31260 410 aaPredicted RBP28.62■■■□□ 2.17
SF1-214ENST00000477596 JARID2Q92833 1246 aaPredicted RBP28.62■■■□□ 2.17
SF1-214ENST00000477596 TRMT2AQ8IZ69 625 aaKnown RBP28.61■■■□□ 2.17
SF1-214ENST00000477596 RNF181Q9P0P0 153 aa28.61■■■□□ 2.17
SF1-214ENST00000477596 CWC25Q9NXE8 425 aaPredicted RBP28.6■■■□□ 2.17
SF1-214ENST00000477596 CCDC88AQ3V6T2 1871 aa28.59■■■□□ 2.17
SF1-214ENST00000477596 ALDH1B1P30837 517 aa28.59■■■□□ 2.17
SF1-214ENST00000477596 CWF19L2Q2TBE0 894 aaKnown RBP28.59■■■□□ 2.17
SF1-214ENST00000477596 CCDC191Q8NCU4 936 aa28.59■■■□□ 2.17
SF1-214ENST00000477596 RBM17Q96I25 401 aaKnown RBP28.59■■■□□ 2.17
SF1-214ENST00000477596 TAF1P21675 1872 aa28.59■■■□□ 2.17
SF1-214ENST00000477596 HNRNPUQ00839 825 aaKnown RBP eCLIP28.58■■■□□ 2.17
SF1-214ENST00000477596 ZBTB38Q8NAP3 1195 aaPredicted RBP28.58■■■□□ 2.17
SF1-214ENST00000477596 ZNF526Q8TF50 670 aaPredicted RBP28.58■■■□□ 2.17
SF1-214ENST00000477596 ABCC4O15439 1325 aa28.58■■■□□ 2.17
SF1-214ENST00000477596 COL4A1P02462 1669 aa28.58■■■□□ 2.16
SF1-214ENST00000477596 F6X3S4 739 aa28.57■■■□□ 2.16
SF1-214ENST00000477596 IRS4O14654 1257 aaPredicted RBP28.57■■■□□ 2.16
SF1-214ENST00000477596 DNAAF4Q8WXU2 420 aa28.57■■■□□ 2.16
SF1-214ENST00000477596 CRAMP1Q96RY5 1269 aa28.57■■■□□ 2.16
SF1-214ENST00000477596 TIAM2Q8IVF5 1701 aa28.57■■■□□ 2.16
SF1-214ENST00000477596 NEURL1BA8MQ27 555 aa28.56■■■□□ 2.16
SF1-214ENST00000477596 NEXNQ0ZGT2 675 aa28.56■■■□□ 2.16
SF1-214ENST00000477596 CCDC93Q567U6 631 aa28.56■■■□□ 2.16
SF1-214ENST00000477596 SNED1Q8TER0 1413 aa28.56■■■□□ 2.16
SF1-214ENST00000477596 PCCAP05165 728 aaPredicted RBP28.55■■■□□ 2.16
SF1-214ENST00000477596 TAOK3Q9H2K8 898 aa28.55■■■□□ 2.16
SF1-214ENST00000477596 PPEF1O14829 653 aaPredicted RBP28.54■■■□□ 2.16
SF1-214ENST00000477596 LMNB1P20700 586 aa28.54■■■□□ 2.16
SF1-214ENST00000477596 SOGA3Q5TF21 947 aa28.54■■■□□ 2.16
SF1-214ENST00000477596 BCL2L13Q9BXK5 485 aa28.54■■■□□ 2.16
SF1-214ENST00000477596 MRPL50Q8N5N7 158 aaKnown RBP28.53■■■□□ 2.16
SF1-214ENST00000477596 SSH1Q8WYL5 1049 aa28.53■■■□□ 2.16
SF1-214ENST00000477596 LTBP3Q9NS15 1303 aa28.52■■■□□ 2.16
SF1-214ENST00000477596 SF3B3Q15393 1217 aaKnown RBP28.5■■■□□ 2.15
SF1-214ENST00000477596 DDX46Q7L014 1031 aaKnown RBP28.5■■■□□ 2.15
SF1-214ENST00000477596 DICER1Q9UPY3 1922 aaKnown RBP28.49■■■□□ 2.15
SF1-214ENST00000477596 LINS1Q8NG48 757 aa28.49■■■□□ 2.15
SF1-214ENST00000477596 CDHR2Q9BYE9 1310 aa28.48■■■□□ 2.15
SF1-214ENST00000477596 FKBP4Q02790 459 aaKnown RBP eCLIP28.48■■■□□ 2.15
SF1-214ENST00000477596 GRAPQ13588 217 aa28.48■■■□□ 2.15
SF1-214ENST00000477596 GCKRQ14397 625 aa28.48■■■□□ 2.15
SF1-214ENST00000477596 UBE3BQ7Z3V4 1068 aa28.48■■■□□ 2.15
SF1-214ENST00000477596 GRAPLQ8TC17 118 aaPredicted RBP28.48■■■□□ 2.15
SF1-214ENST00000477596 CCDC85AQ96PX6 553 aaPredicted RBP28.48■■■□□ 2.15
SF1-214ENST00000477596 ZNF277Q9NRM2 450 aaPredicted RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms