RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLC4A10Q6U841 1118 aa19.45■□□□□ 0.7
SEC13-215ENST00000477547 ATF7IPQ6VMQ6 1270 aa19.45■□□□□ 0.7
SEC13-215ENST00000477547 ARHGAP45Q92619 1136 aa19.45■□□□□ 0.7
SEC13-215ENST00000477547 ABCC4O15439 1325 aa19.45■□□□□ 0.7
SEC13-215ENST00000477547 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
SEC13-215ENST00000477547 MMP10P09238 476 aa19.44■□□□□ 0.7
SEC13-215ENST00000477547 IBTKQ9P2D0 1353 aaPredicted RBP19.43■□□□□ 0.7
SEC13-215ENST00000477547 ATP5J2-PTCD1G3V325 749 aa19.43■□□□□ 0.7
SEC13-215ENST00000477547 DDR1Q08345 913 aa19.43■□□□□ 0.7
SEC13-215ENST00000477547 ZNF34Q8IZ26 560 aa19.43■□□□□ 0.7
SEC13-215ENST00000477547 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
SEC13-215ENST00000477547 SETDB2Q96T68 719 aa19.43■□□□□ 0.7
SEC13-215ENST00000477547 TNNQ9UQP3 1299 aa19.43■□□□□ 0.7
SEC13-215ENST00000477547 COL11A2P13942 1736 aaPredicted RBP19.42■□□□□ 0.7
SEC13-215ENST00000477547 PARP10Q53GL7 1025 aa19.42■□□□□ 0.7
SEC13-215ENST00000477547 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
SEC13-215ENST00000477547 CLUAP1Q96AJ1 413 aa19.42■□□□□ 0.7
SEC13-215ENST00000477547 ISCA1Q9BUE6 129 aa19.42■□□□□ 0.7
SEC13-215ENST00000477547 DLEC1Q9Y238 1755 aa19.41■□□□□ 0.7
SEC13-215ENST00000477547 POLRMTO00411 1230 aaKnown RBP19.41■□□□□ 0.7
SEC13-215ENST00000477547 RRP1P56182 461 aaKnown RBP19.41■□□□□ 0.7
SEC13-215ENST00000477547 CWF19L2Q2TBE0 894 aaKnown RBP19.41■□□□□ 0.7
SEC13-215ENST00000477547 NLRP10Q86W26 655 aa19.41■□□□□ 0.7
SEC13-215ENST00000477547 LINS1Q8NG48 757 aa19.41■□□□□ 0.7
SEC13-215ENST00000477547 PARP3Q9Y6F1 533 aa19.41■□□□□ 0.7
SEC13-215ENST00000477547 CACNA1SQ13698 1873 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 FAM177BA6PVY3 158 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 NEURL1BA8MQ27 555 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 PLIN1O60240 522 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 IGKV5-2P06315 115 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 TM4SF1P30408 202 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 BEND3Q5T5X7 828 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 DNAJC5GQ8N7S2 189 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 SRCIN1Q9C0H9 1055 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 KIAA1551Q9HCM1 1747 aa19.4■□□□□ 0.7
SEC13-215ENST00000477547 APLP1P51693 650 aa19.39■□□□□ 0.69
SEC13-215ENST00000477547 NBPF5PQ86XG9 351 aaPredicted RBP19.39■□□□□ 0.69
SEC13-215ENST00000477547 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.69
SEC13-215ENST00000477547 CWC25Q9NXE8 425 aaPredicted RBP19.39■□□□□ 0.69
SEC13-215ENST00000477547 C10orf71Q711Q0 1435 aa19.39■□□□□ 0.69
SEC13-215ENST00000477547 ABCC12Q96J65 1359 aa19.38■□□□□ 0.69
SEC13-215ENST00000477547 NPHP1O15259 732 aa19.38■□□□□ 0.69
SEC13-215ENST00000477547 NTSR2O95665 410 aa19.38■□□□□ 0.69
SEC13-215ENST00000477547 CCT4P50991 539 aaKnown RBP19.38■□□□□ 0.69
SEC13-215ENST00000477547 PPP1R42Q7Z4L9 355 aa19.38■□□□□ 0.69
SEC13-215ENST00000477547 CNBD1Q8NA66 436 aa19.38■□□□□ 0.69
SEC13-215ENST00000477547 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
SEC13-215ENST00000477547 RNF123Q5XPI4 1314 aa19.37■□□□□ 0.69
SEC13-215ENST00000477547 ALDH1L1O75891 902 aa19.37■□□□□ 0.69
SEC13-215ENST00000477547 SERPINB2P05120 415 aa19.37■□□□□ 0.69
SEC13-215ENST00000477547 MS4A1P11836 297 aa19.37■□□□□ 0.69
SEC13-215ENST00000477547 TRIM28Q13263 835 aaKnown RBP19.37■□□□□ 0.69
SEC13-215ENST00000477547 SUSD4Q5VX71 490 aa19.37■□□□□ 0.69
SEC13-215ENST00000477547 NYXQ9GZU5 481 aa19.37■□□□□ 0.69
SEC13-215ENST00000477547 RIC1Q4ADV7 1423 aa19.36■□□□□ 0.69
SEC13-215ENST00000477547 RLBP1P12271 317 aa19.36■□□□□ 0.69
SEC13-215ENST00000477547 TMEM57Q8N5G2 664 aa19.36■□□□□ 0.69
SEC13-215ENST00000477547 PANK1Q8TE04 598 aa19.36■□□□□ 0.69
SEC13-215ENST00000477547 UTP14AQ9BVJ6 771 aaKnown RBP19.36■□□□□ 0.69
SEC13-215ENST00000477547 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
SEC13-215ENST00000477547 GCKRQ14397 625 aa19.35■□□□□ 0.69
SEC13-215ENST00000477547 INTS3Q68E01 1043 aaKnown RBP19.35■□□□□ 0.69
SEC13-215ENST00000477547 PRR5LQ6MZQ0 368 aa19.35■□□□□ 0.69
SEC13-215ENST00000477547 TRMT112Q9UI30 125 aaKnown RBP19.35■□□□□ 0.69
SEC13-215ENST00000477547 SH3TC1Q8TE82 1336 aa19.34■□□□□ 0.69
SEC13-215ENST00000477547 BRCA1P38398 1863 aaKnown RBP19.34■□□□□ 0.69
SEC13-215ENST00000477547 GTF2E1P29083 439 aaPredicted RBP19.34■□□□□ 0.69
SEC13-215ENST00000477547 ST5P78524 1137 aa19.34■□□□□ 0.69
SEC13-215ENST00000477547 NUTM1Q86Y26 1132 aa19.34■□□□□ 0.69
SEC13-215ENST00000477547 ITPRIPQ8IWB1 547 aa19.34■□□□□ 0.69
SEC13-215ENST00000477547 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
SEC13-215ENST00000477547 TOMM70O94826 608 aa19.33■□□□□ 0.69
SEC13-215ENST00000477547 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.69
SEC13-215ENST00000477547 TPTE2Q6XPS3 522 aa19.33■□□□□ 0.69
SEC13-215ENST00000477547 GRM8O00222 908 aa19.32■□□□□ 0.68
SEC13-215ENST00000477547 PCCAP05165 728 aaPredicted RBP19.32■□□□□ 0.68
SEC13-215ENST00000477547 PDE3AQ14432 1141 aa19.32■□□□□ 0.68
SEC13-215ENST00000477547 ERFEQ4G0M1 354 aa19.32■□□□□ 0.68
SEC13-215ENST00000477547 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
SEC13-215ENST00000477547 UBE3BQ7Z3V4 1068 aa19.32■□□□□ 0.68
SEC13-215ENST00000477547 CCDC24Q8N4L8 307 aa19.32■□□□□ 0.68
SEC13-215ENST00000477547 ZBTB38Q8NAP3 1195 aaPredicted RBP19.32■□□□□ 0.68
SEC13-215ENST00000477547 CAPN15O75808 1086 aa19.31■□□□□ 0.68
SEC13-215ENST00000477547 HTRA3P83110 453 aa19.31■□□□□ 0.68
SEC13-215ENST00000477547 COL13A1Q5TAT6 717 aaPredicted RBP19.31■□□□□ 0.68
SEC13-215ENST00000477547 FAM89AQ96GI7 184 aa19.31■□□□□ 0.68
SEC13-215ENST00000477547 NMRK2Q9NPI5 230 aa19.31■□□□□ 0.68
SEC13-215ENST00000477547 C9orf78Q9NZ63 289 aaPredicted RBP19.31■□□□□ 0.68
SEC13-215ENST00000477547 CDHR2Q9BYE9 1310 aa19.31■□□□□ 0.68
SEC13-215ENST00000477547 TAF1P21675 1872 aa19.3■□□□□ 0.68
SEC13-215ENST00000477547 JARID2Q92833 1246 aaPredicted RBP19.3■□□□□ 0.68
SEC13-215ENST00000477547 COG6Q9Y2V7 657 aa19.3■□□□□ 0.68
SEC13-215ENST00000477547 MVPQ14764 893 aaKnown RBP19.29■□□□□ 0.68
SEC13-215ENST00000477547 SYNE4Q8N205 404 aa19.29■□□□□ 0.68
SEC13-215ENST00000477547 MEIS3Q99687 375 aa19.28■□□□□ 0.68
SEC13-215ENST00000477547 WDR90Q96KV7 1748 aa19.28■□□□□ 0.68
SEC13-215ENST00000477547 UTYO14607 1347 aa19.28■□□□□ 0.68
SEC13-215ENST00000477547 H7C1W4 665 aa19.27■□□□□ 0.68
SEC13-215ENST00000477547 IRS4O14654 1257 aaPredicted RBP19.27■□□□□ 0.68
SEC13-215ENST00000477547 NBPF7P0C2Y1 421 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms