RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, human

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF3-208	ENST00000477440	RIC3	Q7Z5B4	369 aa		32.62	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	LAMB2	P55268	1798 aa		32.62	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	ZNF428	Q96B54	188 aa		32.61	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	UTP14A	Q9BVJ6	771 aa	Known RBP	32.61	■■■□□ 2.81
ARHGEF3-208	ENST00000477440		E9PSI1	815 aa		32.6	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	ATP5J2-PTCD1	G3V325	749 aa		32.6	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	SLC4A2	P04920	1241 aa		32.6	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	G2E3	Q7L622	706 aa		32.6	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	ISCA1	Q9BUE6	129 aa		32.6	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	STYK1	Q6J9G0	422 aa		32.59	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	ARHGAP27	Q6ZUM4	889 aa		32.59	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	MASTL	Q96GX5	879 aa		32.59	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	DDX60	Q8IY21	1712 aa	Known RBP	32.58	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	SLFN5	Q08AF3	891 aa		32.58	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	CDCA7L	Q96GN5	454 aa		32.58	■■■□□ 2.81
ARHGEF3-208	ENST00000477440	DDX58	O95786	925 aa	Known RBP	32.57	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	RNF123	Q5XPI4	1314 aa		32.56	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	NPR1	P16066	1061 aa		32.56	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	SBF1	O95248	1867 aa		32.56	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	ADCY9	O60503	1353 aa		32.56	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	CRY2	Q49AN0	593 aa		32.55	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	SYNE4	Q8N205	404 aa		32.55	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	CNKSR1	Q969H4	720 aa		32.55	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	MYD88	Q99836	296 aa		32.55	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	TRMT112	Q9UI30	125 aa	Known RBP	32.55	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	C3orf67	Q6ZVT6	689 aa		32.54	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	MAP3K2	Q9Y2U5	619 aa		32.54	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	FER1L6	Q2WGJ9	1857 aa		32.53	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	PI4KAP2	A4QPH2	592 aa		32.53	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	FLII	Q13045	1269 aa		32.53	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	PRPF40B	Q6NWY9	871 aa	Known RBP	32.53	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	PI4KAP1	Q8N8J0	262 aa		32.53	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.53	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	SH3TC1	Q8TE82	1336 aa		32.52	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	TRIM28	Q13263	835 aa	Known RBP	32.52	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	SLC10A5	Q5PT55	438 aa		32.52	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	KSR2	Q6VAB6	950 aa		32.52	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	METTL22	Q9BUU2	404 aa	Predicted RBP	32.52	■■■□□ 2.8
ARHGEF3-208	ENST00000477440	CCDC88A	Q3V6T2	1871 aa		32.51	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	C21orf2	O43822	256 aa		32.5	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	HCLS1	P14317	486 aa	Predicted RBP	32.49	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	TRMT2A	Q8IZ69	625 aa	Known RBP	32.49	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	FKBP5	Q13451	457 aa	Predicted RBP	32.48	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	RPGR	Q92834	1020 aa	Known RBP	32.48	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	FAM89A	Q96GI7	184 aa		32.48	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	NLRP3	Q96P20	1036 aa		32.48	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	RASSF7	Q02833	373 aa		32.47	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	RTL5	Q5HYW3	569 aa	Predicted RBP	32.46	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	HOXA10	P31260	410 aa	Predicted RBP	32.45	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.45	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	CCDC191	Q8NCU4	936 aa		32.45	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	TAF1	P21675	1872 aa		32.45	■■■□□ 2.79
ARHGEF3-208	ENST00000477440	NFKBIE	O00221	500 aa		32.44	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	IGKV5-2	P06315	115 aa		32.44	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	ALDH1B1	P30837	517 aa		32.44	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.44	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	C7orf43	Q8WVR3	580 aa		32.44	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	CWC25	Q9NXE8	425 aa	Predicted RBP	32.44	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	NEXN	Q0ZGT2	675 aa		32.42	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.42	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	PRELP	P51888	382 aa		32.41	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	CWF19L2	Q2TBE0	894 aa	Known RBP	32.41	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	C9orf131	Q5VYM1	1079 aa		32.41	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	OLFM4	Q6UX06	510 aa		32.41	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	DNAAF4	Q8WXU2	420 aa		32.41	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	RBM17	Q96I25	401 aa	Known RBP	32.41	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	CRAMP1	Q96RY5	1269 aa		32.4	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	TIAM2	Q8IVF5	1701 aa		32.4	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	IRS4	O14654	1257 aa	Predicted RBP	32.39	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	JARID2	Q92833	1246 aa	Predicted RBP	32.39	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	DICER1	Q9UPY3	1922 aa	Known RBP	32.39	■■■□□ 2.78
ARHGEF3-208	ENST00000477440	ABCC4	O15439	1325 aa		32.38	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	NEURL1B	A8MQ27	555 aa		32.38	■■■□□ 2.77
ARHGEF3-208	ENST00000477440		F6X3S4	739 aa		32.38	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	PCCA	P05165	728 aa	Predicted RBP	32.38	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	SOGA3	Q5TF21	947 aa		32.38	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	RNF181	Q9P0P0	153 aa		32.38	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	MYH3	P11055	1940 aa		32.38	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	CCDC93	Q567U6	631 aa		32.37	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	SLC51A	Q86UW1	340 aa		32.37	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	MRPL50	Q8N5N7	158 aa	Known RBP	32.37	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	SSH1	Q8WYL5	1049 aa		32.36	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	SNED1	Q8TER0	1413 aa		32.35	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	COL4A1	P02462	1669 aa		32.34	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	LTBP3	Q9NS15	1303 aa		32.34	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	PPEF1	O14829	653 aa	Predicted RBP	32.34	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	LMNB1	P20700	586 aa		32.34	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	BCL2L13	Q9BXK5	485 aa		32.34	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	TAOK3	Q9H2K8	898 aa		32.34	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	SF3B3	Q15393	1217 aa	Known RBP	32.33	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	LINS1	Q8NG48	757 aa		32.33	■■■□□ 2.77
ARHGEF3-208	ENST00000477440	DDX46	Q7L014	1031 aa	Known RBP	32.32	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	CDHR2	Q9BYE9	1310 aa		32.31	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	GCKR	Q14397	625 aa		32.31	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	CT47B1	P0C2W7	299 aa	Predicted RBP	32.3	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	ALDH1L2	Q3SY69	923 aa		32.3	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	ZNF526	Q8TF50	670 aa	Predicted RBP	32.3	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	LRRC37A	A6NMS7	1700 aa		32.29	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	GRAP	Q13588	217 aa		32.29	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	BEND3	Q5T5X7	828 aa		32.29	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms