RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 HOMER2Q9NSB8 354 aa21.4■■□□□ 1.02
VARS2-209ENST00000477288 BIN1O00499 593 aa21.4■■□□□ 1.02
VARS2-209ENST00000477288 MMRN2Q9H8L6 949 aa21.4■■□□□ 1.02
VARS2-209ENST00000477288 HAND2P61296 217 aa21.39■■□□□ 1.02
VARS2-209ENST00000477288 RAB11FIP4Q86YS3 637 aa21.39■■□□□ 1.02
VARS2-209ENST00000477288 TEX13AQ9BXU3 409 aaPredicted RBP21.39■■□□□ 1.02
VARS2-209ENST00000477288 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.02
VARS2-209ENST00000477288 CBX1P83916 185 aa21.39■■□□□ 1.02
VARS2-209ENST00000477288 PUS7Q96PZ0 661 aaKnown RBP21.39■■□□□ 1.01
VARS2-209ENST00000477288 IFNL2Q8IZJ0 200 aa21.39■■□□□ 1.01
VARS2-209ENST00000477288 PANK2Q9BZ23 570 aa21.39■■□□□ 1.01
VARS2-209ENST00000477288 NOP2P46087 812 aaKnown RBP21.38■■□□□ 1.01
VARS2-209ENST00000477288 AMPD3Q01432 767 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 BICD1Q96G01 975 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 FSIP1Q8NA03 581 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 JARID2Q92833 1246 aaPredicted RBP21.38■■□□□ 1.01
VARS2-209ENST00000477288 SERPINA10Q9UK55 444 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 PABPN1LA6NDY0 278 aaKnown RBP21.38■■□□□ 1.01
VARS2-209ENST00000477288 TAOK3Q9H2K8 898 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 EVI5LQ96CN4 794 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 MPHOSPH6Q99547 160 aaKnown RBP21.38■■□□□ 1.01
VARS2-209ENST00000477288 WASLO00401 505 aaPredicted RBP21.38■■□□□ 1.01
VARS2-209ENST00000477288 MFSD6Q6ZSS7 791 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 PPM1EQ8WY54 764 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 PRDM10Q9NQV6 1147 aa21.38■■□□□ 1.01
VARS2-209ENST00000477288 NBPF6Q5VWK0 638 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 NBPF5PQ86XG9 351 aaPredicted RBP21.37■■□□□ 1.01
VARS2-209ENST00000477288 NBPF4Q96M43 638 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 ALS2CR12Q96Q35 445 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 IARSP41252 1262 aaKnown RBP21.37■■□□□ 1.01
VARS2-209ENST00000477288 STXBP4Q6ZWJ1 553 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 FLIIQ13045 1269 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 ISM2Q6H9L7 571 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 PKNOX2Q96KN3 472 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 LIMCH1Q9UPQ0 1083 aa21.37■■□□□ 1.01
VARS2-209ENST00000477288 LMAN1P49257 510 aa21.36■■□□□ 1.01
VARS2-209ENST00000477288 RARSP54136 660 aaKnown RBP21.36■■□□□ 1.01
VARS2-209ENST00000477288 MICU3Q86XE3 530 aa21.36■■□□□ 1.01
VARS2-209ENST00000477288 ZSCAN30Q86W11 494 aa21.36■■□□□ 1.01
VARS2-209ENST00000477288 CHRNA2Q15822 529 aa21.36■■□□□ 1.01
VARS2-209ENST00000477288 TMC6Q7Z403 805 aa21.36■■□□□ 1.01
VARS2-209ENST00000477288 TTC21AQ8NDW8 1320 aa21.36■■□□□ 1.01
VARS2-209ENST00000477288 CCDC175P0C221 793 aa21.36■■□□□ 1.01
VARS2-209ENST00000477288 FBXO31Q5XUX0 539 aaPredicted RBP21.35■■□□□ 1.01
VARS2-209ENST00000477288 UBE3BQ7Z3V4 1068 aa21.35■■□□□ 1.01
VARS2-209ENST00000477288 VTI1AQ96AJ9 217 aa21.35■■□□□ 1.01
VARS2-209ENST00000477288 C11orf95C9JLR9 678 aaPredicted RBP21.35■■□□□ 1.01
VARS2-209ENST00000477288 PPFIA3O75145 1194 aa21.35■■□□□ 1.01
VARS2-209ENST00000477288 SLC26A6Q9BXS9 759 aa21.35■■□□□ 1.01
VARS2-209ENST00000477288 ABCC11Q96J66 1382 aa21.35■■□□□ 1.01
VARS2-209ENST00000477288 MAATS1Q7Z4T9 603 aa21.35■■□□□ 1.01
VARS2-209ENST00000477288 F8W031 263 aaPredicted RBP21.34■■□□□ 1.01
VARS2-209ENST00000477288 IDI1Q13907 227 aa21.34■■□□□ 1.01
VARS2-209ENST00000477288 FSD2A1L4K1 749 aa21.34■■□□□ 1.01
VARS2-209ENST00000477288 METAP2P50579 478 aaKnown RBP eCLIP21.34■■□□□ 1.01
VARS2-209ENST00000477288 CRNKL1Q9BZJ0 848 aaKnown RBP21.34■■□□□ 1.01
VARS2-209ENST00000477288 FERP16591 822 aa21.34■■□□□ 1.01
VARS2-209ENST00000477288 GSTO1P78417 241 aa21.34■■□□□ 1.01
VARS2-209ENST00000477288 CLEC11AQ9Y240 323 aa21.34■■□□□ 1.01
VARS2-209ENST00000477288 TSNARE1Q96NA8 513 aa21.34■■□□□ 1.01
VARS2-209ENST00000477288 NAA15Q9BXJ9 866 aaKnown RBP21.34■■□□□ 1.01
VARS2-209ENST00000477288 ECHDC1Q9NTX5 307 aa21.33■■□□□ 1.01
VARS2-209ENST00000477288 ADGRF5Q8IZF2 1346 aa21.33■■□□□ 1.01
VARS2-209ENST00000477288 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
VARS2-209ENST00000477288 WDR70Q9NW82 654 aa21.33■■□□□ 1.01
VARS2-209ENST00000477288 TFIP11Q9UBB9 837 aaKnown RBP21.33■■□□□ 1.01
VARS2-209ENST00000477288 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1
VARS2-209ENST00000477288 CTAGE5O15320 804 aa21.33■■□□□ 1
VARS2-209ENST00000477288 UBA7P41226 1012 aa21.33■■□□□ 1
VARS2-209ENST00000477288 GJB2P29033 226 aa21.33■■□□□ 1
VARS2-209ENST00000477288 CCDC152Q4G0S7 254 aa21.33■■□□□ 1
VARS2-209ENST00000477288 ZNF354CQ86Y25 554 aa21.33■■□□□ 1
VARS2-209ENST00000477288 ACSBG1Q96GR2 724 aa21.33■■□□□ 1
VARS2-209ENST00000477288 C16orf45Q96MC5 204 aaPredicted RBP21.33■■□□□ 1
VARS2-209ENST00000477288 USP25Q9UHP3 1055 aa21.32■■□□□ 1
VARS2-209ENST00000477288 PLEKHH1Q9ULM0 1364 aa21.32■■□□□ 1
VARS2-209ENST00000477288 PTPRCP08575 1304 aa21.32■■□□□ 1
VARS2-209ENST00000477288 TBCAO75347 108 aaKnown RBP21.32■■□□□ 1
VARS2-209ENST00000477288 MICALCLQ6ZW33 695 aa21.32■■□□□ 1
VARS2-209ENST00000477288 TRERF1Q96PN7 1200 aa21.32■■□□□ 1
VARS2-209ENST00000477288 CCDC174Q6PII3 467 aa21.32■■□□□ 1
VARS2-209ENST00000477288 STX8Q9UNK0 236 aa21.32■■□□□ 1
VARS2-209ENST00000477288 CTR9Q6PD62 1173 aa21.32■■□□□ 1
VARS2-209ENST00000477288 PLCD3Q8N3E9 789 aa21.32■■□□□ 1
VARS2-209ENST00000477288 SSFA2P28290 1259 aa21.31■■□□□ 1
VARS2-209ENST00000477288 NCOA7Q8NI08 942 aa21.31■■□□□ 1
VARS2-209ENST00000477288 SSX2IPQ9Y2D8 614 aa21.31■■□□□ 1
VARS2-209ENST00000477288 ORC3Q9UBD5 711 aaPredicted RBP21.31■■□□□ 1
VARS2-209ENST00000477288 TSPY3P0CV98 308 aa21.31■■□□□ 1
VARS2-209ENST00000477288 TSPY8P0CW00 308 aa21.31■■□□□ 1
VARS2-209ENST00000477288 PPP1R14CQ8TAE6 165 aa21.31■■□□□ 1
VARS2-209ENST00000477288 GDPD2Q9HCC8 539 aa21.31■■□□□ 1
VARS2-209ENST00000477288 FAM114A1Q8IWE2 563 aa21.3■■□□□ 1
VARS2-209ENST00000477288 SMARCC1Q92922 1105 aaPredicted RBP21.3■■□□□ 1
VARS2-209ENST00000477288 JADE2Q9NQC1 790 aa21.3■■□□□ 1
VARS2-209ENST00000477288 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
VARS2-209ENST00000477288 FERMT1Q9BQL6 677 aa21.3■■□□□ 1
VARS2-209ENST00000477288 HDAC9Q9UKV0 1011 aa21.3■■□□□ 1
VARS2-209ENST00000477288 SNRPA1P09661 255 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms