RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 FBXO11Q86XK2 927 aa7.06□□□□□ -1.28
XRN1-211ENST00000477237 PIK3CDO00329 1044 aa7.05□□□□□ -1.28
XRN1-211ENST00000477237 RGS9O75916 674 aaPredicted RBP7.05□□□□□ -1.28
XRN1-211ENST00000477237 TAL1P17542 331 aaPredicted RBP7.05□□□□□ -1.28
XRN1-211ENST00000477237 FSTP19883 344 aa7.05□□□□□ -1.28
XRN1-211ENST00000477237 GTF2IP78347 998 aa7.05□□□□□ -1.28
XRN1-211ENST00000477237 MSL1Q68DK7 614 aa7.05□□□□□ -1.28
XRN1-211ENST00000477237 ANKIB1Q9P2G1 1089 aa7.05□□□□□ -1.28
XRN1-211ENST00000477237 FZD5Q13467 585 aa7.04□□□□□ -1.28
XRN1-211ENST00000477237 C1orf53Q5VUE5 145 aa7.04□□□□□ -1.28
XRN1-211ENST00000477237 DTWD1Q8N5C7 304 aa7.04□□□□□ -1.28
XRN1-211ENST00000477237 SUSD3Q96L08 255 aa7.04□□□□□ -1.28
XRN1-211ENST00000477237 HCN4Q9Y3Q4 1203 aa7.04□□□□□ -1.28
XRN1-211ENST00000477237 OAS3Q9Y6K5 1087 aaKnown RBP7.04□□□□□ -1.28
XRN1-211ENST00000477237 MED26O95402 600 aa7.03□□□□□ -1.28
XRN1-211ENST00000477237 PSME1Q06323 249 aa7.03□□□□□ -1.28
XRN1-211ENST00000477237 GRIK5Q16478 980 aa7.03□□□□□ -1.28
XRN1-211ENST00000477237 EML3Q32P44 896 aa7.03□□□□□ -1.28
XRN1-211ENST00000477237 PHACTR1Q9C0D0 580 aa7.03□□□□□ -1.28
XRN1-211ENST00000477237 NOD1Q9Y239 953 aa7.03□□□□□ -1.28
XRN1-211ENST00000477237 SEMA3FQ13275 785 aa7.02□□□□□ -1.29
XRN1-211ENST00000477237 IGF2-ASQ6U949 168 aa7.02□□□□□ -1.29
XRN1-211ENST00000477237 SLC51AQ86UW1 340 aa7.02□□□□□ -1.29
XRN1-211ENST00000477237 PRM3Q9NNZ6 103 aa7.02□□□□□ -1.29
XRN1-211ENST00000477237 RNF114Q9Y508 228 aa7.02□□□□□ -1.29
XRN1-211ENST00000477237 HIRAP54198 1017 aaPredicted RBP7.01□□□□□ -1.29
XRN1-211ENST00000477237 PLAURQ03405 335 aa7.01□□□□□ -1.29
XRN1-211ENST00000477237 POTEAQ6S8J7 498 aa7.01□□□□□ -1.29
XRN1-211ENST00000477237 DZIP1LQ8IYY4 767 aaKnown RBP7.01□□□□□ -1.29
XRN1-211ENST00000477237 GSX2Q9BZM3 304 aa7.01□□□□□ -1.29
XRN1-211ENST00000477237 BRPF1P55201 1214 aaPredicted RBP7□□□□□ -1.29
XRN1-211ENST00000477237 GP2P55259 537 aaKnown RBP7□□□□□ -1.29
XRN1-211ENST00000477237 PSMA6P60900 246 aaKnown RBP7□□□□□ -1.29
XRN1-211ENST00000477237 BTLAQ7Z6A9 289 aa7□□□□□ -1.29
XRN1-211ENST00000477237 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
XRN1-211ENST00000477237 DEAF1O75398 565 aaPredicted RBP6.99□□□□□ -1.29
XRN1-211ENST00000477237 ALX3O95076 343 aa6.99□□□□□ -1.29
XRN1-211ENST00000477237 CPB1P15086 417 aa6.99□□□□□ -1.29
XRN1-211ENST00000477237 NFKB1P19838 968 aa6.99□□□□□ -1.29
XRN1-211ENST00000477237 NEUROD2Q15784 382 aa6.99□□□□□ -1.29
XRN1-211ENST00000477237 FAM35AQ86V20 835 aa6.99□□□□□ -1.29
XRN1-211ENST00000477237 LPIN3Q9BQK8 851 aa6.99□□□□□ -1.29
XRN1-211ENST00000477237 TSPAN10Q9H1Z9 355 aaPredicted RBP6.99□□□□□ -1.29
XRN1-211ENST00000477237 EFCC1Q9HA90 598 aa6.99□□□□□ -1.29
XRN1-211ENST00000477237 GDPD2Q9HCC8 539 aa6.99□□□□□ -1.29
XRN1-211ENST00000477237 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.99□□□□□ -1.29
XRN1-211ENST00000477237 KIAA1324LA8MWY0 1029 aaPredicted RBP6.98□□□□□ -1.29
XRN1-211ENST00000477237 SKIP12755 728 aa6.98□□□□□ -1.29
XRN1-211ENST00000477237 ABL2P42684 1182 aa6.98□□□□□ -1.29
XRN1-211ENST00000477237 WFDC8Q8IUA0 241 aa6.98□□□□□ -1.29
XRN1-211ENST00000477237 DLL1O00548 723 aa6.97□□□□□ -1.29
XRN1-211ENST00000477237 ADAMTS4O75173 837 aa6.97□□□□□ -1.29
XRN1-211ENST00000477237 NCOA4Q13772 614 aa6.97□□□□□ -1.29
XRN1-211ENST00000477237 WASHC4Q2M389 1173 aa6.97□□□□□ -1.29
XRN1-211ENST00000477237 PERM1Q5SV97 790 aa6.97□□□□□ -1.29
XRN1-211ENST00000477237 PNMA5Q96PV4 448 aa6.97□□□□□ -1.29
XRN1-211ENST00000477237 AKTIPQ9H8T0 292 aa6.97□□□□□ -1.29
XRN1-211ENST00000477237 LZTS3O60299 673 aaPredicted RBP6.96□□□□□ -1.3
XRN1-211ENST00000477237 TGFB1P01137 390 aa6.96□□□□□ -1.3
XRN1-211ENST00000477237 SOX11P35716 441 aa6.96□□□□□ -1.3
XRN1-211ENST00000477237 CCINQ13939 588 aa6.96□□□□□ -1.3
XRN1-211ENST00000477237 FRRS1LQ9P0K9 344 aa6.96□□□□□ -1.3
XRN1-211ENST00000477237 ZBTB42B2RXF5 422 aa6.95□□□□□ -1.3
XRN1-211ENST00000477237 KIAA1024Q9UPX6 916 aa6.95□□□□□ -1.3
XRN1-211ENST00000477237 CHMP3Q9Y3E7 222 aa6.95□□□□□ -1.3
XRN1-211ENST00000477237 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
XRN1-211ENST00000477237 ZBTB7BO15156 539 aaPredicted RBP6.94□□□□□ -1.3
XRN1-211ENST00000477237 ALDH16A1Q8IZ83 802 aa6.94□□□□□ -1.3
XRN1-211ENST00000477237 DEPDC4Q8N2C3 294 aa6.94□□□□□ -1.3
XRN1-211ENST00000477237 TPCN2Q8NHX9 752 aa6.94□□□□□ -1.3
XRN1-211ENST00000477237 IGLV1-40P01703 118 aa6.93□□□□□ -1.3
XRN1-211ENST00000477237 GRNP28799 593 aaKnown RBP6.93□□□□□ -1.3
XRN1-211ENST00000477237 ELMSAN1Q6PJG2 1045 aa6.93□□□□□ -1.3
XRN1-211ENST00000477237 TMEM130Q8N3G9 435 aa6.93□□□□□ -1.3
XRN1-211ENST00000477237 TTC9Q92623 222 aa6.93□□□□□ -1.3
XRN1-211ENST00000477237 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
XRN1-211ENST00000477237 MLLT1Q03111 559 aaPredicted RBP6.92□□□□□ -1.3
XRN1-211ENST00000477237 PCSK7Q16549 785 aa6.92□□□□□ -1.3
XRN1-211ENST00000477237 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
XRN1-211ENST00000477237 ZFATQ9P243 1243 aa6.92□□□□□ -1.3
XRN1-211ENST00000477237 RAXQ9Y2V3 346 aa6.92□□□□□ -1.3
XRN1-211ENST00000477237 C21orf2O43822 256 aa6.91□□□□□ -1.3
XRN1-211ENST00000477237 PPP1R12BO60237 982 aaPredicted RBP6.91□□□□□ -1.3
XRN1-211ENST00000477237 MAP3K6O95382 1288 aa6.91□□□□□ -1.3
XRN1-211ENST00000477237 CCDC102BQ68D86 513 aa6.91□□□□□ -1.3
XRN1-211ENST00000477237 Q6ZS46 218 aa6.91□□□□□ -1.3
XRN1-211ENST00000477237 DHX32Q7L7V1 743 aaKnown RBP6.91□□□□□ -1.3
XRN1-211ENST00000477237 NFATC2IPQ8NCF5 419 aa6.91□□□□□ -1.3
XRN1-211ENST00000477237 TRPM4Q8TD43 1214 aa6.91□□□□□ -1.3
XRN1-211ENST00000477237 KRTAP4-2Q9BYR5 136 aa6.91□□□□□ -1.3
XRN1-211ENST00000477237 DMGDHQ9UI17 866 aaKnown RBP6.91□□□□□ -1.3
XRN1-211ENST00000477237 USP17L5A8MUK1 530 aa6.9□□□□□ -1.3
XRN1-211ENST00000477237 GSC2O15499 205 aa6.9□□□□□ -1.3
XRN1-211ENST00000477237 SPINK2P20155 84 aa6.9□□□□□ -1.3
XRN1-211ENST00000477237 HIF1AQ16665 826 aa6.9□□□□□ -1.3
XRN1-211ENST00000477237 SMG9Q9H0W8 520 aaKnown RBP6.9□□□□□ -1.3
XRN1-211ENST00000477237 CLDN10P78369 228 aa6.89□□□□□ -1.31
XRN1-211ENST00000477237 IER5Q5VY09 327 aa6.89□□□□□ -1.31
XRN1-211ENST00000477237 KRT25Q7Z3Z0 450 aa6.89□□□□□ -1.31
XRN1-211ENST00000477237 TRIM50Q86XT4 487 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms