RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 TP53INP1Q96A56 240 aa8.54□□□□□ -1.04
PIKFYVE-209ENST00000477200 SSBP4Q9BWG4 385 aaPredicted RBP8.54□□□□□ -1.04
PIKFYVE-209ENST00000477200 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
PIKFYVE-209ENST00000477200 RAC1P63000 192 aa8.53□□□□□ -1.04
PIKFYVE-209ENST00000477200 NRG1Q02297 640 aaPredicted RBP8.53□□□□□ -1.04
PIKFYVE-209ENST00000477200 TRIM50Q86XT4 487 aa8.53□□□□□ -1.04
PIKFYVE-209ENST00000477200 C21orf2O43822 256 aa8.52□□□□□ -1.05
PIKFYVE-209ENST00000477200 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
PIKFYVE-209ENST00000477200 DMRTC2Q8IXT2 367 aaPredicted RBP8.52□□□□□ -1.05
PIKFYVE-209ENST00000477200 FMR1NBQ8N0W7 255 aaPredicted RBP8.52□□□□□ -1.05
PIKFYVE-209ENST00000477200 DNAJB12Q9NXW2 375 aaKnown RBP8.52□□□□□ -1.05
PIKFYVE-209ENST00000477200 NAGPAQ9UK23 515 aa8.52□□□□□ -1.05
PIKFYVE-209ENST00000477200 CHMP3Q9Y3E7 222 aa8.52□□□□□ -1.05
PIKFYVE-209ENST00000477200 M0R2N6 131 aa8.51□□□□□ -1.05
PIKFYVE-209ENST00000477200 ATP1A2P50993 1020 aa8.51□□□□□ -1.05
PIKFYVE-209ENST00000477200 PSAPL1Q6NUJ1 521 aa8.51□□□□□ -1.05
PIKFYVE-209ENST00000477200 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
PIKFYVE-209ENST00000477200 ALDH16A1Q8IZ83 802 aa8.51□□□□□ -1.05
PIKFYVE-209ENST00000477200 GSX2Q9BZM3 304 aa8.51□□□□□ -1.05
PIKFYVE-209ENST00000477200 USP17L3A6NCW0 530 aa8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 USP17L4A6NCW7 530 aa8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 PPP1R12BO60237 982 aaPredicted RBP8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 USP17L2Q6R6M4 530 aa8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 USP17L1Q7RTZ2 530 aa8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 TSEN2Q8NCE0 465 aaKnown RBP8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 ADAMTS19Q8TE59 1207 aa8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 POM121Q96HA1 1249 aa8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 USP21Q9UK80 565 aa8.5□□□□□ -1.05
PIKFYVE-209ENST00000477200 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
PIKFYVE-209ENST00000477200 DKK1O94907 266 aa8.48□□□□□ -1.05
PIKFYVE-209ENST00000477200 LARGE2Q8N3Y3 721 aa8.48□□□□□ -1.05
PIKFYVE-209ENST00000477200 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
PIKFYVE-209ENST00000477200 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.48□□□□□ -1.05
PIKFYVE-209ENST00000477200 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
PIKFYVE-209ENST00000477200 PALM3A6NDB9 673 aaPredicted RBP8.47□□□□□ -1.05
PIKFYVE-209ENST00000477200 POM121CA8CG34 1229 aa8.47□□□□□ -1.05
PIKFYVE-209ENST00000477200 RGS9O75916 674 aaPredicted RBP8.47□□□□□ -1.05
PIKFYVE-209ENST00000477200 UCN2Q96RP3 112 aa8.47□□□□□ -1.05
PIKFYVE-209ENST00000477200 C2orf49Q9BVC5 232 aaPredicted RBP8.47□□□□□ -1.05
PIKFYVE-209ENST00000477200 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
PIKFYVE-209ENST00000477200 STAG2Q8N3U4 1231 aa8.46□□□□□ -1.06
PIKFYVE-209ENST00000477200 WFDC12Q8WWY7 111 aa8.46□□□□□ -1.06
PIKFYVE-209ENST00000477200 NGLY1Q96IV0 654 aa8.46□□□□□ -1.06
PIKFYVE-209ENST00000477200 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
PIKFYVE-209ENST00000477200 NFKB1P19838 968 aa8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 CCINQ13939 588 aa8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 GRIK5Q16478 980 aa8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 SIX5Q8N196 739 aa8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 PNMA5Q96PV4 448 aa8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 DMGDHQ9UI17 866 aaKnown RBP8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 BCS1LQ9Y276 419 aa8.45□□□□□ -1.06
PIKFYVE-209ENST00000477200 NOS3P29474 1203 aa8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 IREB2P48200 963 aaKnown RBP8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 PLAURQ03405 335 aa8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 FBXO11Q86XK2 927 aa8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 WWC1Q8IX03 1113 aa8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 SCG3Q8WXD2 468 aaKnown RBP8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 KRTAP9-9Q9BYP9 154 aa8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 KRTAP9-4Q9BYQ2 154 aa8.44□□□□□ -1.06
PIKFYVE-209ENST00000477200 ATP9BO43861 1147 aa8.43□□□□□ -1.06
PIKFYVE-209ENST00000477200 CPB1P15086 417 aa8.43□□□□□ -1.06
PIKFYVE-209ENST00000477200 HIF1AQ16665 826 aa8.43□□□□□ -1.06
PIKFYVE-209ENST00000477200 FAM35AQ86V20 835 aa8.43□□□□□ -1.06
PIKFYVE-209ENST00000477200 CHMP7Q8WUX9 453 aaPredicted RBP8.43□□□□□ -1.06
PIKFYVE-209ENST00000477200 LPIN3Q9BQK8 851 aa8.43□□□□□ -1.06
PIKFYVE-209ENST00000477200 RNF112Q9ULX5 631 aa8.43□□□□□ -1.06
PIKFYVE-209ENST00000477200 ZBTB42B2RXF5 422 aa8.42□□□□□ -1.06
PIKFYVE-209ENST00000477200 HDGFL1Q5TGJ6 251 aa8.42□□□□□ -1.06
PIKFYVE-209ENST00000477200 IER5Q5VY09 327 aa8.42□□□□□ -1.06
PIKFYVE-209ENST00000477200 DTWD1Q8N5C7 304 aa8.42□□□□□ -1.06
PIKFYVE-209ENST00000477200 MEGF10Q96KG7 1140 aa8.42□□□□□ -1.06
PIKFYVE-209ENST00000477200 TGFBR3LH3BV60 316 aa8.41□□□□□ -1.06
PIKFYVE-209ENST00000477200 TPRNQ4KMQ1 711 aa8.41□□□□□ -1.06
PIKFYVE-209ENST00000477200 PERM1Q5SV97 790 aa8.41□□□□□ -1.06
PIKFYVE-209ENST00000477200 GAS2L2Q8NHY3 880 aa8.41□□□□□ -1.06
PIKFYVE-209ENST00000477200 ZFATQ9P243 1243 aa8.41□□□□□ -1.06
PIKFYVE-209ENST00000477200 RTN1Q16799 776 aa8.4□□□□□ -1.06
PIKFYVE-209ENST00000477200 MAP3K6O95382 1288 aa8.39□□□□□ -1.07
PIKFYVE-209ENST00000477200 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
PIKFYVE-209ENST00000477200 FRRS1LQ9P0K9 344 aa8.39□□□□□ -1.07
PIKFYVE-209ENST00000477200 DEAF1O75398 565 aaPredicted RBP8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 LGR5O75473 907 aa8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 TARSP26639 723 aaKnown RBP8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 INPP5BP32019 993 aa8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 MLLT1Q03111 559 aaPredicted RBP8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 PCSK7Q16549 785 aa8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 PRR23CQ6ZRP0 262 aa8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 KRT25Q7Z3Z0 450 aa8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 WFDC8Q8IUA0 241 aa8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 TRPM4Q8TD43 1214 aa8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 GOLGA2P5Q9HBQ8 144 aa8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
PIKFYVE-209ENST00000477200 SEC13P55735 322 aa8.37□□□□□ -1.07
PIKFYVE-209ENST00000477200 ELMSAN1Q6PJG2 1045 aa8.37□□□□□ -1.07
PIKFYVE-209ENST00000477200 DHX32Q7L7V1 743 aaKnown RBP8.37□□□□□ -1.07
PIKFYVE-209ENST00000477200 TTC9Q92623 222 aa8.37□□□□□ -1.07
PIKFYVE-209ENST00000477200 IFT43Q96FT9 208 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms