RNA–Protein interactions for RNA: ENST00000476988.2

ITGB5-206, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 492 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-206ENST00000476988 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
ITGB5-206ENST00000476988 PSMD1Q99460 953 aa13.51□□□□□ -0.25
ITGB5-206ENST00000476988 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
ITGB5-206ENST00000476988 ZNF277Q9NRM2 450 aaPredicted RBP13.51□□□□□ -0.25
ITGB5-206ENST00000476988 CNTNAP1P78357 1384 aa13.5□□□□□ -0.25
ITGB5-206ENST00000476988 ECE1P42892 770 aa13.5□□□□□ -0.25
ITGB5-206ENST00000476988 PIP4K2AP48426 406 aaPredicted RBP13.5□□□□□ -0.25
ITGB5-206ENST00000476988 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
ITGB5-206ENST00000476988 C7orf43Q8WVR3 580 aa13.5□□□□□ -0.25
ITGB5-206ENST00000476988 ABT1Q9ULW3 272 aaKnown RBP13.5□□□□□ -0.25
ITGB5-206ENST00000476988 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
ITGB5-206ENST00000476988 PPP2R1AP30153 589 aa13.49□□□□□ -0.25
ITGB5-206ENST00000476988 CNTROBQ8N137 903 aa13.49□□□□□ -0.25
ITGB5-206ENST00000476988 LARGE2Q8N3Y3 721 aa13.49□□□□□ -0.25
ITGB5-206ENST00000476988 SUPT20HQ8NEM7 779 aa13.49□□□□□ -0.25
ITGB5-206ENST00000476988 NLRP3Q96P20 1036 aa13.49□□□□□ -0.25
ITGB5-206ENST00000476988 VPS33BQ9H267 617 aa13.49□□□□□ -0.25
ITGB5-206ENST00000476988 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
ITGB5-206ENST00000476988 GJA3Q9Y6H8 435 aa13.49□□□□□ -0.25
ITGB5-206ENST00000476988 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
ITGB5-206ENST00000476988 FZD9O00144 591 aa13.48□□□□□ -0.25
ITGB5-206ENST00000476988 PARP10Q53GL7 1025 aa13.48□□□□□ -0.25
ITGB5-206ENST00000476988 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
ITGB5-206ENST00000476988 MAP3K15Q6ZN16 1313 aa13.47□□□□□ -0.25
ITGB5-206ENST00000476988 PASKQ96RG2 1323 aa13.47□□□□□ -0.25
ITGB5-206ENST00000476988 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
ITGB5-206ENST00000476988 NIM1KQ8IY84 436 aa13.47□□□□□ -0.25
ITGB5-206ENST00000476988 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.25
ITGB5-206ENST00000476988 ERBB4Q15303 1308 aa13.46□□□□□ -0.25
ITGB5-206ENST00000476988 RNF123Q5XPI4 1314 aa13.46□□□□□ -0.25
ITGB5-206ENST00000476988 PRAMEF22A3QJZ6 481 aa13.46□□□□□ -0.25
ITGB5-206ENST00000476988 POTEIP0CG38 1075 aa13.46□□□□□ -0.25
ITGB5-206ENST00000476988 POTEJP0CG39 1038 aa13.46□□□□□ -0.25
ITGB5-206ENST00000476988 MYL6BP14649 208 aa13.46□□□□□ -0.25
ITGB5-206ENST00000476988 VEGFBP49765 207 aa13.46□□□□□ -0.25
ITGB5-206ENST00000476988 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
ITGB5-206ENST00000476988 FER1L6Q2WGJ9 1857 aa13.46□□□□□ -0.26
ITGB5-206ENST00000476988 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 NBPF26B4DH59 902 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 PPEF1O14829 653 aaPredicted RBP13.45□□□□□ -0.26
ITGB5-206ENST00000476988 FOXN1O15353 648 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 ITGBL1O95965 494 aaPredicted RBP13.45□□□□□ -0.26
ITGB5-206ENST00000476988 LMOD3Q0VAK6 560 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 HLFQ16534 295 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 HSP90AB3PQ58FF7 597 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 MAP1SQ66K74 1059 aaPredicted RBP13.45□□□□□ -0.26
ITGB5-206ENST00000476988 NBPF10Q6P3W6 841 aaKnown RBP13.45□□□□□ -0.26
ITGB5-206ENST00000476988 NBPF15Q8N660 670 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 CRAMP1Q96RY5 1269 aa13.45□□□□□ -0.26
ITGB5-206ENST00000476988 DICER1Q9UPY3 1922 aaKnown RBP13.45□□□□□ -0.26
ITGB5-206ENST00000476988 ZNF541Q9H0D2 1346 aa13.44□□□□□ -0.26
ITGB5-206ENST00000476988 SCN4AP35499 1836 aa13.44□□□□□ -0.26
ITGB5-206ENST00000476988 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
ITGB5-206ENST00000476988 NUTM1Q86Y26 1132 aa13.44□□□□□ -0.26
ITGB5-206ENST00000476988 ZBTB3Q9H5J0 574 aa13.44□□□□□ -0.26
ITGB5-206ENST00000476988 MIS18AQ9NYP9 233 aa13.44□□□□□ -0.26
ITGB5-206ENST00000476988 ANKRD31Q8N7Z5 1873 aa13.44□□□□□ -0.26
ITGB5-206ENST00000476988 IBTKQ9P2D0 1353 aaPredicted RBP13.44□□□□□ -0.26
ITGB5-206ENST00000476988 WDR33Q9C0J8 1336 aaKnown RBP13.43□□□□□ -0.26
ITGB5-206ENST00000476988 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
ITGB5-206ENST00000476988 PPIP5K2O43314 1243 aa13.43□□□□□ -0.26
ITGB5-206ENST00000476988 TNIP1Q15025 636 aa13.43□□□□□ -0.26
ITGB5-206ENST00000476988 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
ITGB5-206ENST00000476988 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
ITGB5-206ENST00000476988 UTP14AQ9BVJ6 771 aaKnown RBP13.43□□□□□ -0.26
ITGB5-206ENST00000476988 DDX21Q9NR30 783 aaKnown RBP eCLIP13.43□□□□□ -0.26
ITGB5-206ENST00000476988 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
ITGB5-206ENST00000476988 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
ITGB5-206ENST00000476988 SLX4Q8IY92 1834 aa13.43□□□□□ -0.26
ITGB5-206ENST00000476988 BBOX1O75936 387 aa13.42□□□□□ -0.26
ITGB5-206ENST00000476988 GPTP24298 496 aa13.42□□□□□ -0.26
ITGB5-206ENST00000476988 EIF4A1P60842 406 aaKnown RBP13.42□□□□□ -0.26
ITGB5-206ENST00000476988 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
ITGB5-206ENST00000476988 SIPA1L3O60292 1781 aaPredicted RBP13.42□□□□□ -0.26
ITGB5-206ENST00000476988 BCORQ6W2J9 1755 aa13.41□□□□□ -0.26
ITGB5-206ENST00000476988 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
ITGB5-206ENST00000476988 CA12O43570 354 aa13.41□□□□□ -0.26
ITGB5-206ENST00000476988 LBX1P52954 281 aa13.41□□□□□ -0.26
ITGB5-206ENST00000476988 DPP8Q6V1X1 898 aaPredicted RBP13.41□□□□□ -0.26
ITGB5-206ENST00000476988 DDX46Q7L014 1031 aaKnown RBP13.41□□□□□ -0.26
ITGB5-206ENST00000476988 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
ITGB5-206ENST00000476988 BCL2L13Q9BXK5 485 aa13.41□□□□□ -0.26
ITGB5-206ENST00000476988 ADARB2Q9NS39 739 aaKnown RBP13.41□□□□□ -0.26
ITGB5-206ENST00000476988 COL11A2P13942 1736 aaPredicted RBP13.41□□□□□ -0.26
ITGB5-206ENST00000476988 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
ITGB5-206ENST00000476988 EIF2S2P20042 333 aaKnown RBP13.4□□□□□ -0.26
ITGB5-206ENST00000476988 GRM1Q13255 1194 aa13.4□□□□□ -0.26
ITGB5-206ENST00000476988 SUSD4Q5VX71 490 aa13.4□□□□□ -0.26
ITGB5-206ENST00000476988 ZNRF3Q9ULT6 936 aa13.4□□□□□ -0.26
ITGB5-206ENST00000476988 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
ITGB5-206ENST00000476988 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
ITGB5-206ENST00000476988 MAP2K2P36507 400 aa13.39□□□□□ -0.27
ITGB5-206ENST00000476988 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
ITGB5-206ENST00000476988 ZNF34Q8IZ26 560 aa13.39□□□□□ -0.27
ITGB5-206ENST00000476988 MPNDQ8N594 471 aa13.39□□□□□ -0.27
ITGB5-206ENST00000476988 GPR101Q96P66 508 aaPredicted RBP13.39□□□□□ -0.27
ITGB5-206ENST00000476988 ATP6V0A2Q9Y487 856 aa13.39□□□□□ -0.27
ITGB5-206ENST00000476988 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
ITGB5-206ENST00000476988 H7C1D1 291 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms