RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
PRPF3-205ENST00000476970 LGR6Q9HBX8 967 aa10.03□□□□□ -0.8
PRPF3-205ENST00000476970 ADARB2Q9NS39 739 aaKnown RBP10.03□□□□□ -0.8
PRPF3-205ENST00000476970 SIPA1L3O60292 1781 aaPredicted RBP10.03□□□□□ -0.8
PRPF3-205ENST00000476970 KLRG2A4D1S0 409 aaPredicted RBP10.02□□□□□ -0.81
PRPF3-205ENST00000476970 CLEC4GQ6UXB4 293 aa10.02□□□□□ -0.81
PRPF3-205ENST00000476970 TPTE2Q6XPS3 522 aa10.02□□□□□ -0.81
PRPF3-205ENST00000476970 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
PRPF3-205ENST00000476970 SNED1Q8TER0 1413 aa10.01□□□□□ -0.81
PRPF3-205ENST00000476970 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
PRPF3-205ENST00000476970 CTU1Q7Z7A3 348 aaKnown RBP10.01□□□□□ -0.81
PRPF3-205ENST00000476970 NIM1KQ8IY84 436 aa10.01□□□□□ -0.81
PRPF3-205ENST00000476970 LARGE2Q8N3Y3 721 aa10.01□□□□□ -0.81
PRPF3-205ENST00000476970 ZNF408Q9H9D4 720 aa10.01□□□□□ -0.81
PRPF3-205ENST00000476970 COL4A5P29400 1685 aa10.01□□□□□ -0.81
PRPF3-205ENST00000476970 CDHR2Q9BYE9 1310 aa10.01□□□□□ -0.81
PRPF3-205ENST00000476970 RGL2O15211 777 aa10□□□□□ -0.81
PRPF3-205ENST00000476970 GPRC5DQ9NZD1 345 aa10□□□□□ -0.81
PRPF3-205ENST00000476970 GTF2E1P29083 439 aaPredicted RBP9.99□□□□□ -0.81
PRPF3-205ENST00000476970 HUNKP57058 714 aa9.99□□□□□ -0.81
PRPF3-205ENST00000476970 TEFQ10587 303 aa9.99□□□□□ -0.81
PRPF3-205ENST00000476970 ZNF790Q6PG37 636 aa9.99□□□□□ -0.81
PRPF3-205ENST00000476970 ZC3H15Q8WU90 426 aaKnown RBP9.99□□□□□ -0.81
PRPF3-205ENST00000476970 ZNF496Q96IT1 587 aaPredicted RBP9.99□□□□□ -0.81
PRPF3-205ENST00000476970 FMNL2Q96PY5 1086 aa9.99□□□□□ -0.81
PRPF3-205ENST00000476970 GLIS2Q9BZE0 524 aaPredicted RBP9.99□□□□□ -0.81
PRPF3-205ENST00000476970 IL13P35225 146 aa9.98□□□□□ -0.81
PRPF3-205ENST00000476970 PKN2Q16513 984 aaKnown RBP9.98□□□□□ -0.81
PRPF3-205ENST00000476970 HABP4Q5JVS0 413 aaKnown RBP9.98□□□□□ -0.81
PRPF3-205ENST00000476970 CHRDL2Q6WN34 429 aa9.98□□□□□ -0.81
PRPF3-205ENST00000476970 CDC37L1Q7L3B6 337 aa9.98□□□□□ -0.81
PRPF3-205ENST00000476970 CCDC102AQ96A19 550 aa9.98□□□□□ -0.81
PRPF3-205ENST00000476970 NIP7Q9Y221 180 aaKnown RBP eCLIP9.98□□□□□ -0.81
PRPF3-205ENST00000476970 A1BGP04217 495 aa9.97□□□□□ -0.81
PRPF3-205ENST00000476970 RGMBQ6NW40 437 aa9.97□□□□□ -0.81
PRPF3-205ENST00000476970 MORC1Q86VD1 984 aa9.97□□□□□ -0.81
PRPF3-205ENST00000476970 RPGRQ92834 1020 aaKnown RBP9.97□□□□□ -0.81
PRPF3-205ENST00000476970 TMX4Q9H1E5 349 aaPredicted RBP9.97□□□□□ -0.81
PRPF3-205ENST00000476970 VPS33BQ9H267 617 aa9.97□□□□□ -0.81
PRPF3-205ENST00000476970 PGAP2Q9UHJ9 254 aa9.97□□□□□ -0.81
PRPF3-205ENST00000476970 HPS5Q9UPZ3 1129 aa9.97□□□□□ -0.81
PRPF3-205ENST00000476970 PPIP5K2O43314 1243 aa9.96□□□□□ -0.82
PRPF3-205ENST00000476970 TRPA1O75762 1119 aa9.96□□□□□ -0.82
PRPF3-205ENST00000476970 MTHFSDQ2M296 383 aaKnown RBP9.96□□□□□ -0.82
PRPF3-205ENST00000476970 CRY2Q49AN0 593 aa9.96□□□□□ -0.82
PRPF3-205ENST00000476970 REM2Q8IYK8 340 aaPredicted RBP9.96□□□□□ -0.82
PRPF3-205ENST00000476970 ZIC5Q96T25 663 aa9.96□□□□□ -0.82
PRPF3-205ENST00000476970 NYXQ9GZU5 481 aa9.96□□□□□ -0.82
PRPF3-205ENST00000476970 RNF186Q9NXI6 227 aa9.96□□□□□ -0.82
PRPF3-205ENST00000476970 NPC1L1Q9UHC9 1359 aa9.96□□□□□ -0.82
PRPF3-205ENST00000476970 RIC1Q4ADV7 1423 aa9.96□□□□□ -0.82
PRPF3-205ENST00000476970 POLR2AP24928 1970 aaKnown RBP9.95□□□□□ -0.82
PRPF3-205ENST00000476970 GMPSP49915 693 aaPredicted RBP9.95□□□□□ -0.82
PRPF3-205ENST00000476970 C2orf69Q8N8R5 385 aa9.95□□□□□ -0.82
PRPF3-205ENST00000476970 SUPT20HQ8NEM7 779 aa9.95□□□□□ -0.82
PRPF3-205ENST00000476970 POLR3GLQ9BT43 218 aa9.95□□□□□ -0.82
PRPF3-205ENST00000476970 BCL2L13Q9BXK5 485 aa9.95□□□□□ -0.82
PRPF3-205ENST00000476970 KIF7Q2M1P5 1343 aa9.95□□□□□ -0.82
PRPF3-205ENST00000476970 NUP98P52948 1817 aa9.95□□□□□ -0.82
PRPF3-205ENST00000476970 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
PRPF3-205ENST00000476970 FAM155AB1AL88 458 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-205ENST00000476970 PPEF1O14829 653 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-205ENST00000476970 HMOX1P09601 288 aa9.94□□□□□ -0.82
PRPF3-205ENST00000476970 ZNF157P51786 506 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-205ENST00000476970 KIF23Q02241 960 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-205ENST00000476970 TNIP1Q15025 636 aa9.94□□□□□ -0.82
PRPF3-205ENST00000476970 GBA2Q9HCG7 927 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-205ENST00000476970 HDAC9Q9UKV0 1011 aa9.94□□□□□ -0.82
PRPF3-205ENST00000476970 ZNRF3Q9ULT6 936 aa9.94□□□□□ -0.82
PRPF3-205ENST00000476970 LAMB4A4D0S4 1761 aa9.93□□□□□ -0.82
PRPF3-205ENST00000476970 ABCC12Q96J65 1359 aa9.93□□□□□ -0.82
PRPF3-205ENST00000476970 IBTKQ9P2D0 1353 aaPredicted RBP9.93□□□□□ -0.82
PRPF3-205ENST00000476970 HOXA10P31260 410 aaPredicted RBP9.93□□□□□ -0.82
PRPF3-205ENST00000476970 CXCL9Q07325 125 aa9.93□□□□□ -0.82
PRPF3-205ENST00000476970 AOC3Q16853 763 aa9.93□□□□□ -0.82
PRPF3-205ENST00000476970 GAS2L2Q8NHY3 880 aa9.93□□□□□ -0.82
PRPF3-205ENST00000476970 RBM17Q96I25 401 aaKnown RBP9.93□□□□□ -0.82
PRPF3-205ENST00000476970 RBBP6Q7Z6E9 1792 aaKnown RBP9.93□□□□□ -0.82
PRPF3-205ENST00000476970 GNAT3A8MTJ3 354 aa9.92□□□□□ -0.82
PRPF3-205ENST00000476970 H7C1D1 291 aa9.92□□□□□ -0.82
PRPF3-205ENST00000476970 SLC10A3P09131 477 aa9.92□□□□□ -0.82
PRPF3-205ENST00000476970 TRPM4Q8TD43 1214 aa9.92□□□□□ -0.82
PRPF3-205ENST00000476970 CRAMP1Q96RY5 1269 aa9.92□□□□□ -0.82
PRPF3-205ENST00000476970 KIAA0100Q14667 2235 aaKnown RBP9.92□□□□□ -0.82
PRPF3-205ENST00000476970 DDX60Q8IY21 1712 aaKnown RBP9.91□□□□□ -0.82
PRPF3-205ENST00000476970 CEP290O15078 2479 aa9.91□□□□□ -0.82
PRPF3-205ENST00000476970 BTBD11A6QL63 1104 aa9.91□□□□□ -0.82
PRPF3-205ENST00000476970 FBXO46Q6PJ61 603 aaPredicted RBP9.91□□□□□ -0.82
PRPF3-205ENST00000476970 KRT26Q7Z3Y9 468 aa9.91□□□□□ -0.82
PRPF3-205ENST00000476970 USP48Q86UV5 1035 aa9.91□□□□□ -0.82
PRPF3-205ENST00000476970 TRIOBPQ9H2D6 2365 aa9.9□□□□□ -0.82
PRPF3-205ENST00000476970 CUL9Q8IWT3 2517 aa9.9□□□□□ -0.82
PRPF3-205ENST00000476970 SNRPA1P09661 255 aaKnown RBP9.9□□□□□ -0.82
PRPF3-205ENST00000476970 PIP4K2AP48426 406 aaPredicted RBP9.9□□□□□ -0.82
PRPF3-205ENST00000476970 FXR1P51114 621 aaKnown RBP eCLIP9.9□□□□□ -0.82
PRPF3-205ENST00000476970 HIRAP54198 1017 aaPredicted RBP9.9□□□□□ -0.82
PRPF3-205ENST00000476970 CSRNP1Q96S65 589 aa9.9□□□□□ -0.82
PRPF3-205ENST00000476970 PANK3Q9H999 370 aa9.9□□□□□ -0.82
PRPF3-205ENST00000476970 CNOT7Q9UIV1 285 aaKnown RBP9.9□□□□□ -0.82
PRPF3-205ENST00000476970 USP16Q9Y5T5 823 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms