RNA–Protein interactions for RNA: ENST00000476953.6

PHF11-208, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-208ENST00000476953 CALD1Q05682 793 aaKnown RBP26.23■■□□□ 1.79
PHF11-208ENST00000476953 WWC1Q8IX03 1113 aa26.23■■□□□ 1.79
PHF11-208ENST00000476953 SNED1Q8TER0 1413 aa26.22■■□□□ 1.79
PHF11-208ENST00000476953 PARP10Q53GL7 1025 aa26.22■■□□□ 1.79
PHF11-208ENST00000476953 SYNE4Q8N205 404 aa26.22■■□□□ 1.79
PHF11-208ENST00000476953 TSPYL6Q8N831 410 aa26.22■■□□□ 1.79
PHF11-208ENST00000476953 DBF4Q9UBU7 674 aaPredicted RBP26.22■■□□□ 1.79
PHF11-208ENST00000476953 LTBP3Q9NS15 1303 aa26.21■■□□□ 1.79
PHF11-208ENST00000476953 CCDC27Q2M243 656 aa26.21■■□□□ 1.79
PHF11-208ENST00000476953 PPP1R42Q7Z4L9 355 aa26.21■■□□□ 1.79
PHF11-208ENST00000476953 NLRP10Q86W26 655 aa26.21■■□□□ 1.79
PHF11-208ENST00000476953 TAOK3Q9H2K8 898 aa26.21■■□□□ 1.79
PHF11-208ENST00000476953 TCIRG1Q13488 830 aa26.2■■□□□ 1.78
PHF11-208ENST00000476953 PHAXQ9H814 394 aaKnown RBP26.2■■□□□ 1.78
PHF11-208ENST00000476953 PLBD2Q8NHP8 589 aa26.19■■□□□ 1.78
PHF11-208ENST00000476953 UTP14AQ9BVJ6 771 aaKnown RBP26.19■■□□□ 1.78
PHF11-208ENST00000476953 SALL2Q9Y467 1007 aaPredicted RBP26.18■■□□□ 1.78
PHF11-208ENST00000476953 ZC3H4Q9UPT8 1303 aaKnown RBP26.17■■□□□ 1.78
PHF11-208ENST00000476953 WDR90Q96KV7 1748 aa26.17■■□□□ 1.78
PHF11-208ENST00000476953 CCDC93Q567U6 631 aa26.17■■□□□ 1.78
PHF11-208ENST00000476953 HSP90AB3PQ58FF7 597 aa26.17■■□□□ 1.78
PHF11-208ENST00000476953 HYPKQ9NX55 129 aa26.17■■□□□ 1.78
PHF11-208ENST00000476953 COL4A1P02462 1669 aa26.17■■□□□ 1.78
PHF11-208ENST00000476953 SOGA3Q5TF21 947 aa26.16■■□□□ 1.78
PHF11-208ENST00000476953 ANKRD13DQ6ZTN6 518 aa26.16■■□□□ 1.78
PHF11-208ENST00000476953 RRAGCQ9HB90 399 aa26.16■■□□□ 1.78
PHF11-208ENST00000476953 KDM2BQ8NHM5 1336 aa26.15■■□□□ 1.78
PHF11-208ENST00000476953 ATP5J2-PTCD1G3V325 749 aa26.15■■□□□ 1.78
PHF11-208ENST00000476953 ALDH1B1P30837 517 aa26.15■■□□□ 1.78
PHF11-208ENST00000476953 HOXA10P31260 410 aaPredicted RBP26.15■■□□□ 1.78
PHF11-208ENST00000476953 RPGRQ92834 1020 aaKnown RBP26.15■■□□□ 1.78
PHF11-208ENST00000476953 COL4A5P29400 1685 aa26.15■■□□□ 1.78
PHF11-208ENST00000476953 GLTPD2A6NH11 291 aa26.14■■□□□ 1.78
PHF11-208ENST00000476953 HCLS1P14317 486 aaPredicted RBP26.14■■□□□ 1.78
PHF11-208ENST00000476953 SLC10A5Q5PT55 438 aa26.14■■□□□ 1.78
PHF11-208ENST00000476953 FAM9BQ8IZU0 186 aa26.14■■□□□ 1.78
PHF11-208ENST00000476953 ISCA1Q9BUE6 129 aa26.14■■□□□ 1.78
PHF11-208ENST00000476953 TRMT112Q9UI30 125 aaKnown RBP26.13■■□□□ 1.77
PHF11-208ENST00000476953 CEP350Q5VT06 3117 aa26.13■■□□□ 1.77
PHF11-208ENST00000476953 TCERG1O14776 1098 aaKnown RBP26.12■■□□□ 1.77
PHF11-208ENST00000476953 FKBP4Q02790 459 aaKnown RBP eCLIP26.12■■□□□ 1.77
PHF11-208ENST00000476953 ZNF277Q9NRM2 450 aaPredicted RBP26.12■■□□□ 1.77
PHF11-208ENST00000476953 RNF123Q5XPI4 1314 aa26.12■■□□□ 1.77
PHF11-208ENST00000476953 NLRP3Q96P20 1036 aa26.11■■□□□ 1.77
PHF11-208ENST00000476953 ABCC4O15439 1325 aa26.11■■□□□ 1.77
PHF11-208ENST00000476953 IL16Q14005 1332 aa26.11■■□□□ 1.77
PHF11-208ENST00000476953 FANCIQ9NVI1 1328 aa26.11■■□□□ 1.77
PHF11-208ENST00000476953 TOMM70O94826 608 aa26.1■■□□□ 1.77
PHF11-208ENST00000476953 NCBP3Q53F19 620 aaKnown RBP26.1■■□□□ 1.77
PHF11-208ENST00000476953 RBM17Q96I25 401 aaKnown RBP26.1■■□□□ 1.77
PHF11-208ENST00000476953 CRAMP1Q96RY5 1269 aa26.1■■□□□ 1.77
PHF11-208ENST00000476953 SH3TC1Q8TE82 1336 aa26.1■■□□□ 1.77
PHF11-208ENST00000476953 LRRC37AA6NMS7 1700 aa26.09■■□□□ 1.77
PHF11-208ENST00000476953 POTECB2RU33 542 aa26.09■■□□□ 1.77
PHF11-208ENST00000476953 SPINK5Q9NQ38 1064 aaPredicted RBP26.09■■□□□ 1.77
PHF11-208ENST00000476953 CACNA1FO60840 1977 aa26.08■■□□□ 1.77
PHF11-208ENST00000476953 PPEF1O14829 653 aaPredicted RBP26.08■■□□□ 1.77
PHF11-208ENST00000476953 RTL5Q5HYW3 569 aaPredicted RBP26.08■■□□□ 1.77
PHF11-208ENST00000476953 CCDC30Q5VVM6 783 aa26.08■■□□□ 1.77
PHF11-208ENST00000476953 RIC3Q7Z5B4 369 aa26.08■■□□□ 1.77
PHF11-208ENST00000476953 FAM89AQ96GI7 184 aa26.08■■□□□ 1.77
PHF11-208ENST00000476953 HSPA6P17066 643 aa26.07■■□□□ 1.76
PHF11-208ENST00000476953 GOLGA2Q08379 1002 aa26.07■■□□□ 1.76
PHF11-208ENST00000476953 TWISTNBQ3B726 338 aaPredicted RBP26.07■■□□□ 1.76
PHF11-208ENST00000476953 RTKN2Q8IZC4 609 aa26.07■■□□□ 1.76
PHF11-208ENST00000476953 MYD88Q99836 296 aa26.06■■□□□ 1.76
PHF11-208ENST00000476953 ZNF541Q9H0D2 1346 aa26.06■■□□□ 1.76
PHF11-208ENST00000476953 DDNO94850 711 aaPredicted RBP26.05■■□□□ 1.76
PHF11-208ENST00000476953 G2E3Q7L622 706 aa26.05■■□□□ 1.76
PHF11-208ENST00000476953 IARSP41252 1262 aaKnown RBP26.04■■□□□ 1.76
PHF11-208ENST00000476953 RBM46Q8TBY0 533 aaKnown RBP26.04■■□□□ 1.76
PHF11-208ENST00000476953 PSMD1Q99460 953 aa26.04■■□□□ 1.76
PHF11-208ENST00000476953 DUOX1Q9NRD9 1551 aa26.03■■□□□ 1.76
PHF11-208ENST00000476953 SCN4AP35499 1836 aa26.03■■□□□ 1.76
PHF11-208ENST00000476953 TRIM28Q13263 835 aaKnown RBP26.03■■□□□ 1.76
PHF11-208ENST00000476953 WDR63Q8IWG1 891 aa26.03■■□□□ 1.76
PHF11-208ENST00000476953 C16orf71Q8IYS4 520 aaPredicted RBP26.03■■□□□ 1.76
PHF11-208ENST00000476953 MYH3P11055 1940 aa26.03■■□□□ 1.76
PHF11-208ENST00000476953 CC2D2BQ6DHV5 1058 aa26.01■■□□□ 1.75
PHF11-208ENST00000476953 DPY19L2Q6NUT2 758 aa26.01■■□□□ 1.75
PHF11-208ENST00000476953 JARID2Q92833 1246 aaPredicted RBP26.01■■□□□ 1.75
PHF11-208ENST00000476953 METTL22Q9BUU2 404 aaPredicted RBP26.01■■□□□ 1.75
PHF11-208ENST00000476953 MAP3K2Q9Y2U5 619 aa26.01■■□□□ 1.75
PHF11-208ENST00000476953 LTBP1Q14766 1721 aa26■■□□□ 1.75
PHF11-208ENST00000476953 VEGFAP15692 232 aaPredicted RBP26■■□□□ 1.75
PHF11-208ENST00000476953 EXOSC9Q06265 439 aaKnown RBP26■■□□□ 1.75
PHF11-208ENST00000476953 ATP6V0A2Q9Y487 856 aa26■■□□□ 1.75
PHF11-208ENST00000476953 SPEF2Q9C093 1822 aa26■■□□□ 1.75
PHF11-208ENST00000476953 PI4KAP2A4QPH2 592 aa25.99■■□□□ 1.75
PHF11-208ENST00000476953 IRS4O14654 1257 aaPredicted RBP25.99■■□□□ 1.75
PHF11-208ENST00000476953 GRAPQ13588 217 aa25.99■■□□□ 1.75
PHF11-208ENST00000476953 PI4KAP1Q8N8J0 262 aa25.99■■□□□ 1.75
PHF11-208ENST00000476953 GRAPLQ8TC17 118 aaPredicted RBP25.99■■□□□ 1.75
PHF11-208ENST00000476953 VAMP4O75379 141 aa25.98■■□□□ 1.75
PHF11-208ENST00000476953 DDX46Q7L014 1031 aaKnown RBP25.98■■□□□ 1.75
PHF11-208ENST00000476953 STK31Q9BXU1 1019 aa25.98■■□□□ 1.75
PHF11-208ENST00000476953 ZNF521Q96K83 1311 aa25.97■■□□□ 1.75
PHF11-208ENST00000476953 FZD9O00144 591 aa25.97■■□□□ 1.75
PHF11-208ENST00000476953 SLC4A2P04920 1241 aa25.97■■□□□ 1.75
PHF11-208ENST00000476953 IGKV5-2P06315 115 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms