RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 C16orf71Q8IYS4 520 aaPredicted RBP27.73■■■□□ 2.03
LIMK1-204ENST00000476792 ARFGEF2Q9Y6D5 1785 aa27.73■■■□□ 2.03
LIMK1-204ENST00000476792 ZC3H4Q9UPT8 1303 aaKnown RBP27.72■■■□□ 2.03
LIMK1-204ENST00000476792 TOMM70O94826 608 aa27.71■■■□□ 2.03
LIMK1-204ENST00000476792 TCIRG1Q13488 830 aa27.71■■■□□ 2.03
LIMK1-204ENST00000476792 CRY2Q49AN0 593 aa27.71■■■□□ 2.03
LIMK1-204ENST00000476792 LTBP3Q9NS15 1303 aa27.7■■■□□ 2.03
LIMK1-204ENST00000476792 C3orf67Q6ZVT6 689 aa27.7■■■□□ 2.02
LIMK1-204ENST00000476792 GLTPD2A6NH11 291 aa27.69■■■□□ 2.02
LIMK1-204ENST00000476792 ANKRD13DQ6ZTN6 518 aa27.69■■■□□ 2.02
LIMK1-204ENST00000476792 NLRP10Q86W26 655 aa27.69■■■□□ 2.02
LIMK1-204ENST00000476792 C8orf58Q8NAV2 365 aa27.69■■■□□ 2.02
LIMK1-204ENST00000476792 HYPKQ9NX55 129 aa27.69■■■□□ 2.02
LIMK1-204ENST00000476792 TIAM2Q8IVF5 1701 aa27.69■■■□□ 2.02
LIMK1-204ENST00000476792 PLBD2Q8NHP8 589 aa27.68■■■□□ 2.02
LIMK1-204ENST00000476792 TCERG1O14776 1098 aaKnown RBP27.67■■■□□ 2.02
LIMK1-204ENST00000476792 SYNE4Q8N205 404 aa27.67■■■□□ 2.02
LIMK1-204ENST00000476792 TSR2Q969E8 191 aaKnown RBP27.67■■■□□ 2.02
LIMK1-204ENST00000476792 RBM17Q96I25 401 aaKnown RBP27.67■■■□□ 2.02
LIMK1-204ENST00000476792 NLRP3Q96P20 1036 aa27.67■■■□□ 2.02
LIMK1-204ENST00000476792 TRMT112Q9UI30 125 aaKnown RBP27.67■■■□□ 2.02
LIMK1-204ENST00000476792 SALL2Q9Y467 1007 aaPredicted RBP27.67■■■□□ 2.02
LIMK1-204ENST00000476792 HSPA6P17066 643 aa27.66■■■□□ 2.02
LIMK1-204ENST00000476792 WWC1Q8IX03 1113 aa27.66■■■□□ 2.02
LIMK1-204ENST00000476792 ZNF277Q9NRM2 450 aaPredicted RBP27.66■■■□□ 2.02
LIMK1-204ENST00000476792 RIC1Q4ADV7 1423 aa27.66■■■□□ 2.02
LIMK1-204ENST00000476792 ATP5J2-PTCD1G3V325 749 aa27.65■■■□□ 2.02
LIMK1-204ENST00000476792 HCLS1P14317 486 aaPredicted RBP27.65■■■□□ 2.02
LIMK1-204ENST00000476792 HOXA10P31260 410 aaPredicted RBP27.65■■■□□ 2.02
LIMK1-204ENST00000476792 FKBP4Q02790 459 aaKnown RBP eCLIP27.65■■■□□ 2.02
LIMK1-204ENST00000476792 DPY19L2Q6NUT2 758 aa27.65■■■□□ 2.02
LIMK1-204ENST00000476792 RTKN2Q8IZC4 609 aa27.65■■■□□ 2.02
LIMK1-204ENST00000476792 ANKRD36CQ5JPF3 1778 aa27.65■■■□□ 2.02
LIMK1-204ENST00000476792 SLC10A5Q5PT55 438 aa27.64■■■□□ 2.02
LIMK1-204ENST00000476792 DICER1Q9UPY3 1922 aaKnown RBP27.63■■■□□ 2.01
LIMK1-204ENST00000476792 CCDC27Q2M243 656 aa27.63■■■□□ 2.01
LIMK1-204ENST00000476792 TSPYL6Q8N831 410 aa27.63■■■□□ 2.01
LIMK1-204ENST00000476792 RBM46Q8TBY0 533 aaKnown RBP27.63■■■□□ 2.01
LIMK1-204ENST00000476792 PHAXQ9H814 394 aaKnown RBP27.63■■■□□ 2.01
LIMK1-204ENST00000476792 CRAMP1Q96RY5 1269 aa27.62■■■□□ 2.01
LIMK1-204ENST00000476792 SH3TC1Q8TE82 1336 aa27.62■■■□□ 2.01
LIMK1-204ENST00000476792 PPEF1O14829 653 aaPredicted RBP27.61■■■□□ 2.01
LIMK1-204ENST00000476792 VEGFAP15692 232 aaPredicted RBP27.61■■■□□ 2.01
LIMK1-204ENST00000476792 GOLGA2Q08379 1002 aa27.61■■■□□ 2.01
LIMK1-204ENST00000476792 RIC3Q7Z5B4 369 aa27.61■■■□□ 2.01
LIMK1-204ENST00000476792 SLC51AQ86UW1 340 aa27.61■■■□□ 2.01
LIMK1-204ENST00000476792 FAM9BQ8IZU0 186 aa27.61■■■□□ 2.01
LIMK1-204ENST00000476792 RNF123Q5XPI4 1314 aa27.61■■■□□ 2.01
LIMK1-204ENST00000476792 ISCA1Q9BUE6 129 aa27.6■■■□□ 2.01
LIMK1-204ENST00000476792 DDNO94850 711 aaPredicted RBP27.59■■■□□ 2.01
LIMK1-204ENST00000476792 CCDC30Q5VVM6 783 aa27.59■■■□□ 2.01
LIMK1-204ENST00000476792 RTL5Q5HYW3 569 aaPredicted RBP27.58■■■□□ 2.01
LIMK1-204ENST00000476792 CC2D2BQ6DHV5 1058 aa27.58■■■□□ 2.01
LIMK1-204ENST00000476792 IARSP41252 1262 aaKnown RBP27.57■■■□□ 2
LIMK1-204ENST00000476792 FAM89AQ96GI7 184 aa27.57■■■□□ 2
LIMK1-204ENST00000476792 ABCC4O15439 1325 aa27.57■■■□□ 2
LIMK1-204ENST00000476792 POTECB2RU33 542 aa27.55■■■□□ 2
LIMK1-204ENST00000476792 MYD88Q99836 296 aa27.55■■■□□ 2
LIMK1-204ENST00000476792 CHMP4AQ9BY43 222 aa27.55■■■□□ 2
LIMK1-204ENST00000476792 TMX4Q9H1E5 349 aaPredicted RBP27.55■■■□□ 2
LIMK1-204ENST00000476792 IL16Q14005 1332 aa27.54■■■□□ 2
LIMK1-204ENST00000476792 TWISTNBQ3B726 338 aaPredicted RBP27.54■■■□□ 2
LIMK1-204ENST00000476792 DDX46Q7L014 1031 aaKnown RBP27.54■■■□□ 2
LIMK1-204ENST00000476792 PSMD1Q99460 953 aa27.54■■■□□ 2
LIMK1-204ENST00000476792 FSTL1Q12841 308 aa27.53■■■□□ 2
LIMK1-204ENST00000476792 SMC1BQ8NDV3 1235 aa27.53■■■□□ 2
LIMK1-204ENST00000476792 LAMB2P55268 1798 aa27.53■■■□□ 2
LIMK1-204ENST00000476792 SNED1Q8TER0 1413 aa27.52■■■□□ 2
LIMK1-204ENST00000476792 ZNF541Q9H0D2 1346 aa27.52■■■□□ 2
LIMK1-204ENST00000476792 STK31Q9BXU1 1019 aa27.52■■■□□ 2
LIMK1-204ENST00000476792 ATP6V0A2Q9Y487 856 aa27.52■■■□□ 2
LIMK1-204ENST00000476792 WDR90Q96KV7 1748 aa27.51■■□□□ 1.99
LIMK1-204ENST00000476792 DDX58O95786 925 aaKnown RBP27.51■■□□□ 1.99
LIMK1-204ENST00000476792 APLP1P51693 650 aa27.51■■□□□ 1.99
LIMK1-204ENST00000476792 NCBP3Q53F19 620 aaKnown RBP27.51■■□□□ 1.99
LIMK1-204ENST00000476792 JDP2Q8WYK2 163 aa27.51■■□□□ 1.99
LIMK1-204ENST00000476792 BBOX1O75936 387 aa27.5■■□□□ 1.99
LIMK1-204ENST00000476792 TRIM28Q13263 835 aaKnown RBP27.5■■□□□ 1.99
LIMK1-204ENST00000476792 GRIPAP1Q4V328 841 aa27.5■■□□□ 1.99
LIMK1-204ENST00000476792 FANCIQ9NVI1 1328 aa27.49■■□□□ 1.99
LIMK1-204ENST00000476792 IRS4O14654 1257 aaPredicted RBP27.49■■□□□ 1.99
LIMK1-204ENST00000476792 WDR63Q8IWG1 891 aa27.49■■□□□ 1.99
LIMK1-204ENST00000476792 LARGE2Q8N3Y3 721 aa27.49■■□□□ 1.99
LIMK1-204ENST00000476792 JARID2Q92833 1246 aaPredicted RBP27.49■■□□□ 1.99
LIMK1-204ENST00000476792 MAP3K2Q9Y2U5 619 aa27.49■■□□□ 1.99
LIMK1-204ENST00000476792 GRAPQ13588 217 aa27.48■■□□□ 1.99
LIMK1-204ENST00000476792 GRAPLQ8TC17 118 aaPredicted RBP27.48■■□□□ 1.99
LIMK1-204ENST00000476792 METTL22Q9BUU2 404 aaPredicted RBP27.48■■□□□ 1.99
LIMK1-204ENST00000476792 TAF1P21675 1872 aa27.47■■□□□ 1.99
LIMK1-204ENST00000476792 SP8Q8IXZ3 490 aa27.47■■□□□ 1.99
LIMK1-204ENST00000476792 DDX60Q8IY21 1712 aaKnown RBP27.47■■□□□ 1.99
LIMK1-204ENST00000476792 FZD9O00144 591 aa27.46■■□□□ 1.99
LIMK1-204ENST00000476792 SLC4A2P04920 1241 aa27.46■■□□□ 1.99
LIMK1-204ENST00000476792 HTRA3P83110 453 aa27.46■■□□□ 1.99
LIMK1-204ENST00000476792 G2E3Q7L622 706 aa27.46■■□□□ 1.99
LIMK1-204ENST00000476792 ZBTB38Q8NAP3 1195 aaPredicted RBP27.46■■□□□ 1.99
LIMK1-204ENST00000476792 PI4KAP2A4QPH2 592 aa27.45■■□□□ 1.98
LIMK1-204ENST00000476792 PPIP5K2O43314 1243 aa27.45■■□□□ 1.98
LIMK1-204ENST00000476792 DPP8Q6V1X1 898 aaPredicted RBP27.45■■□□□ 1.98
LIMK1-204ENST00000476792 KSR2Q6VAB6 950 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms