RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 ABCC12Q96J65 1359 aa19.29■□□□□ 0.68
DFFA-203ENST00000476658 ATP5J2-PTCD1G3V325 749 aa19.28■□□□□ 0.68
DFFA-203ENST00000476658 TTLL6Q8N841 843 aa19.28■□□□□ 0.68
DFFA-203ENST00000476658 ZNF428Q96B54 188 aa19.28■□□□□ 0.68
DFFA-203ENST00000476658 YY1P25490 414 aa19.27■□□□□ 0.68
DFFA-203ENST00000476658 HNRNPUQ00839 825 aaKnown RBP eCLIP19.27■□□□□ 0.68
DFFA-203ENST00000476658 G2E3Q7L622 706 aa19.27■□□□□ 0.68
DFFA-203ENST00000476658 TRMT112Q9UI30 125 aaKnown RBP19.27■□□□□ 0.68
DFFA-203ENST00000476658 SRGNP10124 158 aa19.26■□□□□ 0.67
DFFA-203ENST00000476658 MASTLQ96GX5 879 aa19.26■□□□□ 0.67
DFFA-203ENST00000476658 MYD88Q99836 296 aa19.26■□□□□ 0.67
DFFA-203ENST00000476658 ISCA1Q9BUE6 129 aa19.26■□□□□ 0.67
DFFA-203ENST00000476658 MAP3K2Q9Y2U5 619 aa19.26■□□□□ 0.67
DFFA-203ENST00000476658 PI4KAP2A4QPH2 592 aa19.25■□□□□ 0.67
DFFA-203ENST00000476658 FLIIQ13045 1269 aa19.25■□□□□ 0.67
DFFA-203ENST00000476658 STYK1Q6J9G0 422 aa19.25■□□□□ 0.67
DFFA-203ENST00000476658 KSR2Q6VAB6 950 aa19.25■□□□□ 0.67
DFFA-203ENST00000476658 ARHGAP27Q6ZUM4 889 aa19.25■□□□□ 0.67
DFFA-203ENST00000476658 PI4KAP1Q8N8J0 262 aa19.25■□□□□ 0.67
DFFA-203ENST00000476658 SLX4Q8IY92 1834 aa19.25■□□□□ 0.67
DFFA-203ENST00000476658 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
DFFA-203ENST00000476658 NPR1P16066 1061 aa19.24■□□□□ 0.67
DFFA-203ENST00000476658 CNKSR1Q969H4 720 aa19.24■□□□□ 0.67
DFFA-203ENST00000476658 METTL22Q9BUU2 404 aaPredicted RBP19.24■□□□□ 0.67
DFFA-203ENST00000476658 RIC1Q4ADV7 1423 aa19.24■□□□□ 0.67
DFFA-203ENST00000476658 LAMB2P55268 1798 aa19.24■□□□□ 0.67
DFFA-203ENST00000476658 SH3TC1Q8TE82 1336 aa19.24■□□□□ 0.67
DFFA-203ENST00000476658 KLRG2A4D1S0 409 aaPredicted RBP19.23■□□□□ 0.67
DFFA-203ENST00000476658 FKBP5Q13451 457 aaPredicted RBP19.23■□□□□ 0.67
DFFA-203ENST00000476658 ADCY9O60503 1353 aa19.22■□□□□ 0.67
DFFA-203ENST00000476658 SYNE4Q8N205 404 aa19.22■□□□□ 0.67
DFFA-203ENST00000476658 RPGRQ92834 1020 aaKnown RBP19.22■□□□□ 0.67
DFFA-203ENST00000476658 NLRP3Q96P20 1036 aa19.22■□□□□ 0.67
DFFA-203ENST00000476658 ZNF219Q9P2Y4 722 aaPredicted RBP19.22■□□□□ 0.67
DFFA-203ENST00000476658 HCLS1P14317 486 aaPredicted RBP19.21■□□□□ 0.67
DFFA-203ENST00000476658 NEXNQ0ZGT2 675 aa19.21■□□□□ 0.67
DFFA-203ENST00000476658 TRIM28Q13263 835 aaKnown RBP19.21■□□□□ 0.67
DFFA-203ENST00000476658 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
DFFA-203ENST00000476658 SLC10A5Q5PT55 438 aa19.21■□□□□ 0.67
DFFA-203ENST00000476658 PRPF40BQ6NWY9 871 aaKnown RBP19.21■□□□□ 0.67
DFFA-203ENST00000476658 DDX60Q8IY21 1712 aaKnown RBP19.21■□□□□ 0.67
DFFA-203ENST00000476658 TRMT2AQ8IZ69 625 aaKnown RBP19.21■□□□□ 0.67
DFFA-203ENST00000476658 CRY2Q49AN0 593 aa19.2■□□□□ 0.66
DFFA-203ENST00000476658 CCDC191Q8NCU4 936 aa19.2■□□□□ 0.66
DFFA-203ENST00000476658 FAM89AQ96GI7 184 aa19.2■□□□□ 0.66
DFFA-203ENST00000476658 CWC25Q9NXE8 425 aaPredicted RBP19.2■□□□□ 0.66
DFFA-203ENST00000476658 C21orf2O43822 256 aa19.19■□□□□ 0.66
DFFA-203ENST00000476658 ALDH1B1P30837 517 aa19.19■□□□□ 0.66
DFFA-203ENST00000476658 C3orf67Q6ZVT6 689 aa19.19■□□□□ 0.66
DFFA-203ENST00000476658 SBF1O95248 1867 aa19.19■□□□□ 0.66
DFFA-203ENST00000476658 CCDC88AQ3V6T2 1871 aa19.19■□□□□ 0.66
DFFA-203ENST00000476658 DNAAF4Q8WXU2 420 aa19.18■□□□□ 0.66
DFFA-203ENST00000476658 IGKV5-2P06315 115 aa19.17■□□□□ 0.66
DFFA-203ENST00000476658 CWF19L2Q2TBE0 894 aaKnown RBP19.17■□□□□ 0.66
DFFA-203ENST00000476658 ZBTB38Q8NAP3 1195 aaPredicted RBP19.17■□□□□ 0.66
DFFA-203ENST00000476658 RBM17Q96I25 401 aaKnown RBP19.17■□□□□ 0.66
DFFA-203ENST00000476658 FER1L6Q2WGJ9 1857 aa19.17■□□□□ 0.66
DFFA-203ENST00000476658 IRS4O14654 1257 aaPredicted RBP19.16■□□□□ 0.66
DFFA-203ENST00000476658 HOXA10P31260 410 aaPredicted RBP19.16■□□□□ 0.66
DFFA-203ENST00000476658 SSH1Q8WYL5 1049 aa19.16■□□□□ 0.66
DFFA-203ENST00000476658 TAF1P21675 1872 aa19.16■□□□□ 0.66
DFFA-203ENST00000476658 NEURL1BA8MQ27 555 aa19.15■□□□□ 0.66
DFFA-203ENST00000476658 F6X3S4 739 aa19.15■□□□□ 0.66
DFFA-203ENST00000476658 PCCAP05165 728 aaPredicted RBP19.15■□□□□ 0.66
DFFA-203ENST00000476658 RASSF7Q02833 373 aa19.15■□□□□ 0.66
DFFA-203ENST00000476658 MRPL50Q8N5N7 158 aaKnown RBP19.15■□□□□ 0.66
DFFA-203ENST00000476658 JARID2Q92833 1246 aaPredicted RBP19.15■□□□□ 0.66
DFFA-203ENST00000476658 BCL2L13Q9BXK5 485 aa19.15■□□□□ 0.66
DFFA-203ENST00000476658 MYH3P11055 1940 aa19.14■□□□□ 0.65
DFFA-203ENST00000476658 CT47B1P0C2W7 299 aaPredicted RBP19.14■□□□□ 0.65
DFFA-203ENST00000476658 SOGA3Q5TF21 947 aa19.14■□□□□ 0.65
DFFA-203ENST00000476658 CRAMP1Q96RY5 1269 aa19.14■□□□□ 0.65
DFFA-203ENST00000476658 SMC4Q9NTJ3 1288 aa19.14■□□□□ 0.65
DFFA-203ENST00000476658 HSP90B1P14625 803 aaKnown RBP19.13■□□□□ 0.65
DFFA-203ENST00000476658 ALDH1L2Q3SY69 923 aa19.13■□□□□ 0.65
DFFA-203ENST00000476658 DDX46Q7L014 1031 aaKnown RBP19.13■□□□□ 0.65
DFFA-203ENST00000476658 LINS1Q8NG48 757 aa19.13■□□□□ 0.65
DFFA-203ENST00000476658 ZBED9Q6R2W3 1325 aa19.13■□□□□ 0.65
DFFA-203ENST00000476658 ABCC4O15439 1325 aa19.12■□□□□ 0.65
DFFA-203ENST00000476658 NFKBIEO00221 500 aa19.12■□□□□ 0.65
DFFA-203ENST00000476658 CCDC93Q567U6 631 aa19.12■□□□□ 0.65
DFFA-203ENST00000476658 C9orf131Q5VYM1 1079 aa19.12■□□□□ 0.65
DFFA-203ENST00000476658 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
DFFA-203ENST00000476658 C7orf43Q8WVR3 580 aa19.12■□□□□ 0.65
DFFA-203ENST00000476658 RNF181Q9P0P0 153 aa19.12■□□□□ 0.65
DFFA-203ENST00000476658 PPEF1O14829 653 aaPredicted RBP19.11■□□□□ 0.65
DFFA-203ENST00000476658 GCKRQ14397 625 aa19.11■□□□□ 0.65
DFFA-203ENST00000476658 OLFM4Q6UX06 510 aa19.11■□□□□ 0.65
DFFA-203ENST00000476658 PTPRCP08575 1304 aa19.1■□□□□ 0.65
DFFA-203ENST00000476658 CDHR2Q9BYE9 1310 aa19.1■□□□□ 0.65
DFFA-203ENST00000476658 PDE8AO60658 829 aa19.1■□□□□ 0.65
DFFA-203ENST00000476658 LMNB1P20700 586 aa19.1■□□□□ 0.65
DFFA-203ENST00000476658 SF3B3Q15393 1217 aaKnown RBP19.1■□□□□ 0.65
DFFA-203ENST00000476658 UBE3BQ7Z3V4 1068 aa19.1■□□□□ 0.65
DFFA-203ENST00000476658 ZNF784Q8NCA9 323 aaPredicted RBP19.1■□□□□ 0.65
DFFA-203ENST00000476658 TAOK3Q9H2K8 898 aa19.1■□□□□ 0.65
DFFA-203ENST00000476658 DICER1Q9UPY3 1922 aaKnown RBP19.1■□□□□ 0.65
DFFA-203ENST00000476658 BEND3Q5T5X7 828 aa19.09■□□□□ 0.65
DFFA-203ENST00000476658 TMX4Q9H1E5 349 aaPredicted RBP19.09■□□□□ 0.65
DFFA-203ENST00000476658 H7C1W4 665 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms