RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 FKBP5Q13451 457 aaPredicted RBP11.48□□□□□ -0.57
RPGR-207ENST00000476559 SWI5Q1ZZU3 235 aa11.48□□□□□ -0.57
RPGR-207ENST00000476559 TMEM164Q5U3C3 297 aa11.48□□□□□ -0.57
RPGR-207ENST00000476559 CHSY3Q70JA7 882 aa11.48□□□□□ -0.57
RPGR-207ENST00000476559 MKL2Q9ULH7 1088 aa11.48□□□□□ -0.57
RPGR-207ENST00000476559 TGFBR3LH3BV60 316 aa11.47□□□□□ -0.57
RPGR-207ENST00000476559 KCNQ4P56696 695 aa11.47□□□□□ -0.57
RPGR-207ENST00000476559 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
RPGR-207ENST00000476559 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
RPGR-207ENST00000476559 OCLNQ16625 522 aa11.45□□□□□ -0.58
RPGR-207ENST00000476559 IER5Q5VY09 327 aa11.45□□□□□ -0.58
RPGR-207ENST00000476559 LINC00114Q6XXX2 140 aa11.45□□□□□ -0.58
RPGR-207ENST00000476559 BHMTQ93088 406 aa11.45□□□□□ -0.58
RPGR-207ENST00000476559 DMGDHQ9UI17 866 aaKnown RBP11.45□□□□□ -0.58
RPGR-207ENST00000476559 ELOA3CA0A087WX78 387 aaPredicted RBP11.44□□□□□ -0.58
RPGR-207ENST00000476559 ELOA3DA6NLF2 546 aaPredicted RBP11.44□□□□□ -0.58
RPGR-207ENST00000476559 SIN3BO75182 1162 aa11.44□□□□□ -0.58
RPGR-207ENST00000476559 ELOA3BQ3SY89 546 aa11.44□□□□□ -0.58
RPGR-207ENST00000476559 ELOA3Q8NG57 546 aa11.44□□□□□ -0.58
RPGR-207ENST00000476559 DCAF5Q96JK2 942 aa11.44□□□□□ -0.58
RPGR-207ENST00000476559 C1orf115Q9H7X2 142 aa11.44□□□□□ -0.58
RPGR-207ENST00000476559 DGKGP49619 791 aa11.43□□□□□ -0.58
RPGR-207ENST00000476559 IDH3AP50213 366 aa11.43□□□□□ -0.58
RPGR-207ENST00000476559 MKNK1Q9BUB5 465 aa11.43□□□□□ -0.58
RPGR-207ENST00000476559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.58
RPGR-207ENST00000476559 LRFN2Q9ULH4 789 aa11.43□□□□□ -0.58
RPGR-207ENST00000476559 ALAS2P22557 587 aa11.42□□□□□ -0.58
RPGR-207ENST00000476559 C11orf91Q3C1V1 193 aa11.42□□□□□ -0.58
RPGR-207ENST00000476559 MYO19Q96H55 970 aa11.42□□□□□ -0.58
RPGR-207ENST00000476559 SUV39H2Q9H5I1 410 aa11.42□□□□□ -0.58
RPGR-207ENST00000476559 TBC1D8BQ0IIM8 1120 aa11.41□□□□□ -0.58
RPGR-207ENST00000476559 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
RPGR-207ENST00000476559 MDFIQ99750 246 aa11.41□□□□□ -0.58
RPGR-207ENST00000476559 IGFLR1Q9H665 355 aa11.41□□□□□ -0.58
RPGR-207ENST00000476559 GNB5O14775 395 aa11.4□□□□□ -0.58
RPGR-207ENST00000476559 MICAL2O94851 1124 aa11.4□□□□□ -0.58
RPGR-207ENST00000476559 COL8A1P27658 744 aa11.4□□□□□ -0.58
RPGR-207ENST00000476559 INPP5BP32019 993 aa11.4□□□□□ -0.58
RPGR-207ENST00000476559 COX20Q5RI15 118 aa11.4□□□□□ -0.58
RPGR-207ENST00000476559 CAPN12Q6ZSI9 719 aa11.4□□□□□ -0.58
RPGR-207ENST00000476559 TNFRSF25Q93038 417 aa11.4□□□□□ -0.58
RPGR-207ENST00000476559 IFT43Q96FT9 208 aa11.4□□□□□ -0.58
RPGR-207ENST00000476559 ADARB2-AS1A8MUL3 147 aa11.39□□□□□ -0.59
RPGR-207ENST00000476559 GRNP28799 593 aaKnown RBP11.39□□□□□ -0.59
RPGR-207ENST00000476559 ADH7P40394 386 aa11.39□□□□□ -0.59
RPGR-207ENST00000476559 PNMA5Q96PV4 448 aa11.39□□□□□ -0.59
RPGR-207ENST00000476559 GSX2Q9BZM3 304 aa11.39□□□□□ -0.59
RPGR-207ENST00000476559 SAP130Q9H0E3 1048 aa11.39□□□□□ -0.59
RPGR-207ENST00000476559 CXXC1Q9P0U4 656 aaPredicted RBP11.39□□□□□ -0.59
RPGR-207ENST00000476559 NAA30Q147X3 362 aaPredicted RBP11.38□□□□□ -0.59
RPGR-207ENST00000476559 SLAIN2Q9P270 581 aa11.38□□□□□ -0.59
RPGR-207ENST00000476559 USP20Q9Y2K6 914 aa11.38□□□□□ -0.59
RPGR-207ENST00000476559 EPB42P16452 691 aa11.37□□□□□ -0.59
RPGR-207ENST00000476559 ARSDP51689 593 aa11.37□□□□□ -0.59
RPGR-207ENST00000476559 CCINQ13939 588 aa11.37□□□□□ -0.59
RPGR-207ENST00000476559 CLP1Q92989 425 aaKnown RBP11.37□□□□□ -0.59
RPGR-207ENST00000476559 UBE2OQ9C0C9 1292 aaKnown RBP11.37□□□□□ -0.59
RPGR-207ENST00000476559 PIK3R2O00459 728 aa11.36□□□□□ -0.59
RPGR-207ENST00000476559 NFKB1P19838 968 aa11.36□□□□□ -0.59
RPGR-207ENST00000476559 PLA2G4EQ3MJ16 856 aa11.36□□□□□ -0.59
RPGR-207ENST00000476559 KRT25Q7Z3Z0 450 aa11.36□□□□□ -0.59
RPGR-207ENST00000476559 STARD13Q9Y3M8 1113 aa11.36□□□□□ -0.59
RPGR-207ENST00000476559 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
RPGR-207ENST00000476559 OPLAHO14841 1288 aa11.35□□□□□ -0.59
RPGR-207ENST00000476559 C16orf46Q6P387 395 aa11.35□□□□□ -0.59
RPGR-207ENST00000476559 TREML1Q86YW5 311 aa11.35□□□□□ -0.59
RPGR-207ENST00000476559 M0R082 166 aa11.34□□□□□ -0.59
RPGR-207ENST00000476559 C8orf86Q6ZUL3 223 aa11.34□□□□□ -0.59
RPGR-207ENST00000476559 ZNF417Q8TAU3 575 aa11.34□□□□□ -0.59
RPGR-207ENST00000476559 TRIM11Q96F44 468 aa11.34□□□□□ -0.59
RPGR-207ENST00000476559 ZNF587Q96SQ5 575 aaPredicted RBP11.34□□□□□ -0.59
RPGR-207ENST00000476559 KRBA1A5PL33 1030 aa11.33□□□□□ -0.6
RPGR-207ENST00000476559 ALBP02768 609 aa11.33□□□□□ -0.6
RPGR-207ENST00000476559 ATP2B4P23634 1241 aa11.33□□□□□ -0.6
RPGR-207ENST00000476559 RGL4Q8IZJ4 473 aa11.33□□□□□ -0.6
RPGR-207ENST00000476559 PLVAPQ9BX97 442 aa11.33□□□□□ -0.6
RPGR-207ENST00000476559 RTCBQ9Y3I0 505 aaKnown RBP11.33□□□□□ -0.6
RPGR-207ENST00000476559 ITGB2P05107 769 aa11.32□□□□□ -0.6
RPGR-207ENST00000476559 TARSP26639 723 aaKnown RBP11.32□□□□□ -0.6
RPGR-207ENST00000476559 ETFBKMTQ8IXQ9 262 aa11.32□□□□□ -0.6
RPGR-207ENST00000476559 COL26A1Q96A83 441 aa11.32□□□□□ -0.6
RPGR-207ENST00000476559 DNAJB12Q9NXW2 375 aaKnown RBP11.32□□□□□ -0.6
RPGR-207ENST00000476559 SASH3O75995 380 aa11.31□□□□□ -0.6
RPGR-207ENST00000476559 FAM26DQ5JW98 314 aa11.31□□□□□ -0.6
RPGR-207ENST00000476559 CMTR1Q8N1G2 835 aaKnown RBP11.31□□□□□ -0.6
RPGR-207ENST00000476559 MICALL1Q8N3F8 863 aa11.31□□□□□ -0.6
RPGR-207ENST00000476559 EFCC1Q9HA90 598 aa11.31□□□□□ -0.6
RPGR-207ENST00000476559 NOP53Q9NZM5 478 aaKnown RBP11.31□□□□□ -0.6
RPGR-207ENST00000476559 SLC6A14Q9UN76 642 aa11.31□□□□□ -0.6
RPGR-207ENST00000476559 PTCD1O75127 700 aaKnown RBP11.3□□□□□ -0.6
RPGR-207ENST00000476559 BRD2P25440 801 aaKnown RBP11.3□□□□□ -0.6
RPGR-207ENST00000476559 ZFATQ9P243 1243 aa11.3□□□□□ -0.6
RPGR-207ENST00000476559 TNFRSF10BO14763 440 aa11.29□□□□□ -0.6
RPGR-207ENST00000476559 SEPT3Q9UH03 358 aa11.29□□□□□ -0.6
RPGR-207ENST00000476559 PPP1R15AO75807 674 aaPredicted RBP11.28□□□□□ -0.6
RPGR-207ENST00000476559 IGHA1P01876 353 aa11.28□□□□□ -0.6
RPGR-207ENST00000476559 RARAP10276 462 aa11.28□□□□□ -0.6
RPGR-207ENST00000476559 ALYREFQ86V81 257 aaKnown RBP11.28□□□□□ -0.6
RPGR-207ENST00000476559 NUDT8Q8WV74 236 aa11.28□□□□□ -0.6
RPGR-207ENST00000476559 XYLBO75191 536 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms