RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-204ENST00000476104 UTP14AQ9BVJ6 771 aaKnown RBP18.48■□□□□ 0.55
SLC48A1-204ENST00000476104 DDX21Q9NR30 783 aaKnown RBP eCLIP18.48■□□□□ 0.55
SLC48A1-204ENST00000476104 ZNF277Q9NRM2 450 aaPredicted RBP18.48■□□□□ 0.55
SLC48A1-204ENST00000476104 RIC1Q4ADV7 1423 aa18.48■□□□□ 0.55
SLC48A1-204ENST00000476104 POTECB2RU33 542 aa18.47■□□□□ 0.55
SLC48A1-204ENST00000476104 HOXA10P31260 410 aaPredicted RBP18.47■□□□□ 0.55
SLC48A1-204ENST00000476104 KRT24Q2M2I5 525 aa18.47■□□□□ 0.55
SLC48A1-204ENST00000476104 NLRP3Q96P20 1036 aa18.47■□□□□ 0.55
SLC48A1-204ENST00000476104 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
SLC48A1-204ENST00000476104 WDR90Q96KV7 1748 aa18.46■□□□□ 0.55
SLC48A1-204ENST00000476104 IQCA1LA6NCM1 817 aa18.46■□□□□ 0.55
SLC48A1-204ENST00000476104 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
SLC48A1-204ENST00000476104 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
SLC48A1-204ENST00000476104 DNAJC5GQ8N7S2 189 aa18.46■□□□□ 0.55
SLC48A1-204ENST00000476104 CRAMP1Q96RY5 1269 aa18.46■□□□□ 0.55
SLC48A1-204ENST00000476104 HOXB7P09629 217 aa18.45■□□□□ 0.54
SLC48A1-204ENST00000476104 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
SLC48A1-204ENST00000476104 HTRA3P83110 453 aa18.45■□□□□ 0.54
SLC48A1-204ENST00000476104 CALD1Q05682 793 aaKnown RBP18.45■□□□□ 0.54
SLC48A1-204ENST00000476104 GRIPAP1Q4V328 841 aa18.45■□□□□ 0.54
SLC48A1-204ENST00000476104 CFAP44Q96MT7 982 aa18.45■□□□□ 0.54
SLC48A1-204ENST00000476104 RNF123Q5XPI4 1314 aa18.45■□□□□ 0.54
SLC48A1-204ENST00000476104 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
SLC48A1-204ENST00000476104 PSMD1Q99460 953 aa18.44■□□□□ 0.54
SLC48A1-204ENST00000476104 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
SLC48A1-204ENST00000476104 DBF4Q9UBU7 674 aaPredicted RBP18.44■□□□□ 0.54
SLC48A1-204ENST00000476104 APAF1O14727 1248 aa18.43■□□□□ 0.54
SLC48A1-204ENST00000476104 TCERG1O14776 1098 aaKnown RBP18.43■□□□□ 0.54
SLC48A1-204ENST00000476104 PPEF1O14829 653 aaPredicted RBP18.43■□□□□ 0.54
SLC48A1-204ENST00000476104 TCIRG1Q13488 830 aa18.43■□□□□ 0.54
SLC48A1-204ENST00000476104 SLC10A5Q5PT55 438 aa18.43■□□□□ 0.54
SLC48A1-204ENST00000476104 KLRG1Q96E93 195 aa18.43■□□□□ 0.54
SLC48A1-204ENST00000476104 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
SLC48A1-204ENST00000476104 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
SLC48A1-204ENST00000476104 NLRP10Q86W26 655 aa18.42■□□□□ 0.54
SLC48A1-204ENST00000476104 L3MBTL3Q96JM7 780 aaPredicted RBP18.42■□□□□ 0.54
SLC48A1-204ENST00000476104 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
SLC48A1-204ENST00000476104 TRMT112Q9UI30 125 aaKnown RBP18.42■□□□□ 0.54
SLC48A1-204ENST00000476104 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
SLC48A1-204ENST00000476104 GNAI1P63096 354 aa18.41■□□□□ 0.54
SLC48A1-204ENST00000476104 C3orf67Q6ZVT6 689 aa18.41■□□□□ 0.54
SLC48A1-204ENST00000476104 HYPKQ9NX55 129 aa18.41■□□□□ 0.54
SLC48A1-204ENST00000476104 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
SLC48A1-204ENST00000476104 ANKRD13DQ6ZTN6 518 aa18.4■□□□□ 0.54
SLC48A1-204ENST00000476104 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
SLC48A1-204ENST00000476104 SH3TC1Q8TE82 1336 aa18.4■□□□□ 0.54
SLC48A1-204ENST00000476104 FZD9O00144 591 aa18.39■□□□□ 0.53
SLC48A1-204ENST00000476104 HCLS1P14317 486 aaPredicted RBP18.39■□□□□ 0.53
SLC48A1-204ENST00000476104 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.53
SLC48A1-204ENST00000476104 LARGE2Q8N3Y3 721 aa18.39■□□□□ 0.53
SLC48A1-204ENST00000476104 TAF1DQ9H5J8 278 aaPredicted RBP18.39■□□□□ 0.53
SLC48A1-204ENST00000476104 IFT57Q9NWB7 429 aa18.39■□□□□ 0.53
SLC48A1-204ENST00000476104 HACL1Q9UJ83 578 aa18.39■□□□□ 0.53
SLC48A1-204ENST00000476104 LDHDQ86WU2 507 aa18.38■□□□□ 0.53
SLC48A1-204ENST00000476104 GPC2Q8N158 579 aa18.38■□□□□ 0.53
SLC48A1-204ENST00000476104 ATP6V0A2Q9Y487 856 aa18.38■□□□□ 0.53
SLC48A1-204ENST00000476104 ANKRD36CQ5JPF3 1778 aa18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 SCN4AP35499 1836 aa18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 BBOX1O75936 387 aa18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 POTEIP0CG38 1075 aa18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 POTEJP0CG39 1038 aa18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 EAPPQ56P03 285 aaPredicted RBP18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 ABCC4O15439 1325 aa18.37■□□□□ 0.53
SLC48A1-204ENST00000476104 ELL2O00472 640 aaPredicted RBP18.36■□□□□ 0.53
SLC48A1-204ENST00000476104 NIM1KQ8IY84 436 aa18.36■□□□□ 0.53
SLC48A1-204ENST00000476104 SUPT20HQ8NEM7 779 aa18.36■□□□□ 0.53
SLC48A1-204ENST00000476104 SNED1Q8TER0 1413 aa18.36■□□□□ 0.53
SLC48A1-204ENST00000476104 CLEC11AQ9Y240 323 aa18.36■□□□□ 0.53
SLC48A1-204ENST00000476104 GJA3Q9Y6H8 435 aa18.36■□□□□ 0.53
SLC48A1-204ENST00000476104 PPIP5K2O43314 1243 aa18.35■□□□□ 0.53
SLC48A1-204ENST00000476104 EPHX2P34913 555 aa18.35■□□□□ 0.53
SLC48A1-204ENST00000476104 GOLGA2Q08379 1002 aa18.35■□□□□ 0.53
SLC48A1-204ENST00000476104 RIC3Q7Z5B4 369 aa18.35■□□□□ 0.53
SLC48A1-204ENST00000476104 PNMA8AQ86V59 439 aaPredicted RBP18.35■□□□□ 0.53
SLC48A1-204ENST00000476104 JMYQ8N9B5 988 aa18.35■□□□□ 0.53
SLC48A1-204ENST00000476104 ZNF428Q96B54 188 aa18.35■□□□□ 0.53
SLC48A1-204ENST00000476104 ATP5J2-PTCD1G3V325 749 aa18.34■□□□□ 0.53
SLC48A1-204ENST00000476104 LMOD1P29536 600 aaPredicted RBP18.34■□□□□ 0.53
SLC48A1-204ENST00000476104 DPP8Q6V1X1 898 aaPredicted RBP18.34■□□□□ 0.53
SLC48A1-204ENST00000476104 SP8Q8IXZ3 490 aa18.34■□□□□ 0.53
SLC48A1-204ENST00000476104 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
SLC48A1-204ENST00000476104 VPS33BQ9H267 617 aa18.34■□□□□ 0.53
SLC48A1-204ENST00000476104 GRAPQ13588 217 aa18.33■□□□□ 0.52
SLC48A1-204ENST00000476104 MPNDQ8N594 471 aa18.33■□□□□ 0.52
SLC48A1-204ENST00000476104 GRAPLQ8TC17 118 aaPredicted RBP18.33■□□□□ 0.52
SLC48A1-204ENST00000476104 FAM89AQ96GI7 184 aa18.33■□□□□ 0.52
SLC48A1-204ENST00000476104 AOC3Q16853 763 aa18.32■□□□□ 0.52
SLC48A1-204ENST00000476104 IFFO2Q5TF58 517 aa18.32■□□□□ 0.52
SLC48A1-204ENST00000476104 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
SLC48A1-204ENST00000476104 SLC51AQ86UW1 340 aa18.32■□□□□ 0.52
SLC48A1-204ENST00000476104 CREBZFQ9NS37 354 aa18.32■□□□□ 0.52
SLC48A1-204ENST00000476104 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
SLC48A1-204ENST00000476104 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
SLC48A1-204ENST00000476104 CCDC30Q5VVM6 783 aa18.31■□□□□ 0.52
SLC48A1-204ENST00000476104 DDX58O95786 925 aaKnown RBP18.3■□□□□ 0.52
SLC48A1-204ENST00000476104 HSP90B1P14625 803 aaKnown RBP18.3■□□□□ 0.52
SLC48A1-204ENST00000476104 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms