RNA–Protein interactions for RNA: ENST00000476038.5

LCLAT1-207, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-207ENST00000476038 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
LCLAT1-207ENST00000476038 GJA3Q9Y6H8 435 aa12.96□□□□□ -0.33
LCLAT1-207ENST00000476038 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
LCLAT1-207ENST00000476038 KCNQ3O43525 872 aa12.95□□□□□ -0.34
LCLAT1-207ENST00000476038 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
LCLAT1-207ENST00000476038 RGS19P49795 217 aa12.95□□□□□ -0.34
LCLAT1-207ENST00000476038 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
LCLAT1-207ENST00000476038 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
LCLAT1-207ENST00000476038 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
LCLAT1-207ENST00000476038 COL4A5P29400 1685 aa12.94□□□□□ -0.34
LCLAT1-207ENST00000476038 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
LCLAT1-207ENST00000476038 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
LCLAT1-207ENST00000476038 CYP4F22Q6NT55 531 aa12.94□□□□□ -0.34
LCLAT1-207ENST00000476038 USP50Q70EL3 339 aaPredicted RBP12.94□□□□□ -0.34
LCLAT1-207ENST00000476038 NYXQ9GZU5 481 aa12.94□□□□□ -0.34
LCLAT1-207ENST00000476038 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
LCLAT1-207ENST00000476038 NUP98P52948 1817 aa12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 CA12O43570 354 aa12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 MAP2K2P36507 400 aa12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 SCNN1DP51172 638 aa12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 CRY2Q49AN0 593 aa12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 LARGE2Q8N3Y3 721 aa12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 RPGRQ92834 1020 aaKnown RBP12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 TLL2Q9Y6L7 1015 aa12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 ABCC12Q96J65 1359 aa12.93□□□□□ -0.34
LCLAT1-207ENST00000476038 KIF7Q2M1P5 1343 aa12.92□□□□□ -0.34
LCLAT1-207ENST00000476038 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
LCLAT1-207ENST00000476038 EPS15P42566 896 aa12.92□□□□□ -0.34
LCLAT1-207ENST00000476038 RTF1Q92541 710 aaKnown RBP12.92□□□□□ -0.34
LCLAT1-207ENST00000476038 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
LCLAT1-207ENST00000476038 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
LCLAT1-207ENST00000476038 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.34
LCLAT1-207ENST00000476038 NIM1KQ8IY84 436 aa12.91□□□□□ -0.34
LCLAT1-207ENST00000476038 IBTKQ9P2D0 1353 aaPredicted RBP12.91□□□□□ -0.34
LCLAT1-207ENST00000476038 NPC1L1Q9UHC9 1359 aa12.91□□□□□ -0.34
LCLAT1-207ENST00000476038 CASP8AP2Q9UKL3 1982 aa12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 NBPF26B4DH59 902 aa12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 TRAF5O00463 557 aa12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 HLFQ16534 295 aa12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 CST9Q5W186 159 aa12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 NBPF10Q6P3W6 841 aaKnown RBP12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 NBPF15Q8N660 670 aa12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 MCOLN1Q9GZU1 580 aa12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 ADARB2Q9NS39 739 aaKnown RBP12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
LCLAT1-207ENST00000476038 PER1O15534 1290 aaPredicted RBP12.89□□□□□ -0.35
LCLAT1-207ENST00000476038 AOC2O75106 756 aa12.89□□□□□ -0.35
LCLAT1-207ENST00000476038 HOXA10P31260 410 aaPredicted RBP12.89□□□□□ -0.35
LCLAT1-207ENST00000476038 HHIPL1Q96JK4 782 aa12.89□□□□□ -0.35
LCLAT1-207ENST00000476038 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
LCLAT1-207ENST00000476038 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
LCLAT1-207ENST00000476038 RSPH6AQ9H0K4 717 aa12.89□□□□□ -0.35
LCLAT1-207ENST00000476038 PPEF1O14829 653 aaPredicted RBP12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 PPIP5K2O43314 1243 aa12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 MCM10Q7L590 875 aa12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 SAPCD2Q86UD0 394 aa12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 TMX4Q9H1E5 349 aaPredicted RBP12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 GPRC5DQ9NZD1 345 aa12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
LCLAT1-207ENST00000476038 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 ERVV-1B6SEH8 477 aa12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 CELF2O95319 508 aaKnown RBP12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 CRAMP1Q96RY5 1269 aa12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 PCGF6Q9BYE7 350 aa12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 NUDCQ9Y266 331 aa12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
LCLAT1-207ENST00000476038 DGKZQ13574 1117 aa12.86□□□□□ -0.35
LCLAT1-207ENST00000476038 CNGB1Q14028 1251 aaPredicted RBP12.86□□□□□ -0.35
LCLAT1-207ENST00000476038 PDE4DIPQ5VU43 2346 aa12.86□□□□□ -0.35
LCLAT1-207ENST00000476038 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
LCLAT1-207ENST00000476038 HTATSF1O43719 755 aaKnown RBP12.85□□□□□ -0.35
LCLAT1-207ENST00000476038 NOGQ13253 232 aa12.85□□□□□ -0.35
LCLAT1-207ENST00000476038 AOC3Q16853 763 aa12.85□□□□□ -0.35
LCLAT1-207ENST00000476038 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
LCLAT1-207ENST00000476038 SUPT20HQ8NEM7 779 aa12.85□□□□□ -0.35
LCLAT1-207ENST00000476038 GPTP24298 496 aa12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 GMPSP49915 693 aaPredicted RBP12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 ZNF408Q9H9D4 720 aa12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 ZNRF3Q9ULT6 936 aa12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 UBN2Q6ZU65 1347 aa12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
LCLAT1-207ENST00000476038 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
LCLAT1-207ENST00000476038 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
LCLAT1-207ENST00000476038 CXCL9Q07325 125 aa12.83□□□□□ -0.36
LCLAT1-207ENST00000476038 DCTN1Q14203 1278 aa12.83□□□□□ -0.36
LCLAT1-207ENST00000476038 CIAPIN1Q6FI81 312 aa12.83□□□□□ -0.36
LCLAT1-207ENST00000476038 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
LCLAT1-207ENST00000476038 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.36
LCLAT1-207ENST00000476038 LAMB2P55268 1798 aa12.83□□□□□ -0.36
LCLAT1-207ENST00000476038 ANKRD36CQ5JPF3 1778 aa12.82□□□□□ -0.36
LCLAT1-207ENST00000476038 NTSR2O95665 410 aa12.82□□□□□ -0.36
LCLAT1-207ENST00000476038 TNIP1Q15025 636 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms