RNA–Protein interactions for RNA: ENST00000475988.1

PKP1-204, Transcript of plakophilin 1, humanhuman

TSL 3

Gene PKP1, Length 931 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-204ENST00000475988 RGL2O15211 777 aa16.63■□□□□ 0.25
PKP1-204ENST00000475988 LINC00116Q8NCU8 138 aa16.63■□□□□ 0.25
PKP1-204ENST00000475988 PLA2G12BQ9BX93 195 aa16.63■□□□□ 0.25
PKP1-204ENST00000475988 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
PKP1-204ENST00000475988 CDHR2Q9BYE9 1310 aa16.63■□□□□ 0.25
PKP1-204ENST00000475988 USP42Q9H9J4 1324 aaKnown RBP16.63■□□□□ 0.25
PKP1-204ENST00000475988 LAMB2P55268 1798 aa16.62■□□□□ 0.25
PKP1-204ENST00000475988 PCCAP05165 728 aaPredicted RBP16.62■□□□□ 0.25
PKP1-204ENST00000475988 PDE1AP54750 535 aa16.62■□□□□ 0.25
PKP1-204ENST00000475988 HLFQ16534 295 aa16.62■□□□□ 0.25
PKP1-204ENST00000475988 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
PKP1-204ENST00000475988 APBB1O00213 710 aa16.61■□□□□ 0.25
PKP1-204ENST00000475988 SEC24BO95487 1268 aa16.61■□□□□ 0.25
PKP1-204ENST00000475988 RC3H1Q5TC82 1133 aaKnown RBP16.61■□□□□ 0.25
PKP1-204ENST00000475988 NLRP10Q86W26 655 aa16.61■□□□□ 0.25
PKP1-204ENST00000475988 ERC1Q8IUD2 1116 aa16.61■□□□□ 0.25
PKP1-204ENST00000475988 ZNF34Q8IZ26 560 aa16.61■□□□□ 0.25
PKP1-204ENST00000475988 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
PKP1-204ENST00000475988 ZNF772Q68DY9 489 aaPredicted RBP16.6■□□□□ 0.25
PKP1-204ENST00000475988 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
PKP1-204ENST00000475988 BCL11BQ9C0K0 894 aaPredicted RBP16.6■□□□□ 0.25
PKP1-204ENST00000475988 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
PKP1-204ENST00000475988 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
PKP1-204ENST00000475988 MYH3P11055 1940 aa16.59■□□□□ 0.25
PKP1-204ENST00000475988 MX1P20591 662 aa16.59■□□□□ 0.25
PKP1-204ENST00000475988 PTPN12Q05209 780 aaKnown RBP16.59■□□□□ 0.25
PKP1-204ENST00000475988 FAM182BQ5T319 152 aa16.59■□□□□ 0.25
PKP1-204ENST00000475988 JARID2Q92833 1246 aaPredicted RBP16.59■□□□□ 0.25
PKP1-204ENST00000475988 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
PKP1-204ENST00000475988 LRP5O75197 1615 aa16.59■□□□□ 0.25
PKP1-204ENST00000475988 SASH1O94885 1247 aa16.58■□□□□ 0.24
PKP1-204ENST00000475988 RBM6P78332 1123 aaKnown RBP16.58■□□□□ 0.24
PKP1-204ENST00000475988 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
PKP1-204ENST00000475988 UBN2Q6ZU65 1347 aa16.58■□□□□ 0.24
PKP1-204ENST00000475988 COL24A1Q17RW2 1714 aa16.58■□□□□ 0.24
PKP1-204ENST00000475988 LMBR1LQ6UX01 489 aa16.57■□□□□ 0.24
PKP1-204ENST00000475988 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
PKP1-204ENST00000475988 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
PKP1-204ENST00000475988 DDX60Q8IY21 1712 aaKnown RBP16.56■□□□□ 0.24
PKP1-204ENST00000475988 CDC45O75419 566 aa16.56■□□□□ 0.24
PKP1-204ENST00000475988 CSF1RP07333 972 aa16.56■□□□□ 0.24
PKP1-204ENST00000475988 FAM196AQ6ZSG2 479 aa16.56■□□□□ 0.24
PKP1-204ENST00000475988 KRT27Q7Z3Y8 459 aa16.56■□□□□ 0.24
PKP1-204ENST00000475988 TTC41PQ6P2S7 1318 aa16.55■□□□□ 0.24
PKP1-204ENST00000475988 SDSP20132 328 aa16.55■□□□□ 0.24
PKP1-204ENST00000475988 ANP32AP39687 249 aaKnown RBP16.55■□□□□ 0.24
PKP1-204ENST00000475988 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
PKP1-204ENST00000475988 PI4K2BQ8TCG2 481 aa16.55■□□□□ 0.24
PKP1-204ENST00000475988 RPS6KA4O75676 772 aa16.54■□□□□ 0.24
PKP1-204ENST00000475988 G3BP1Q13283 466 aaKnown RBP eCLIP16.54■□□□□ 0.24
PKP1-204ENST00000475988 OS9Q13438 667 aaPredicted RBP16.54■□□□□ 0.24
PKP1-204ENST00000475988 PARP10Q53GL7 1025 aa16.54■□□□□ 0.24
PKP1-204ENST00000475988 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
PKP1-204ENST00000475988 AK7Q96M32 723 aa16.54■□□□□ 0.24
PKP1-204ENST00000475988 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
PKP1-204ENST00000475988 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
PKP1-204ENST00000475988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.54■□□□□ 0.24
PKP1-204ENST00000475988 UBR3Q6ZT12 1888 aa16.53■□□□□ 0.24
PKP1-204ENST00000475988 GPTP24298 496 aa16.53■□□□□ 0.24
PKP1-204ENST00000475988 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
PKP1-204ENST00000475988 CLASRPQ8N2M8 674 aaKnown RBP16.53■□□□□ 0.24
PKP1-204ENST00000475988 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
PKP1-204ENST00000475988 UPF1Q92900 1129 aaKnown RBP eCLIP16.53■□□□□ 0.24
PKP1-204ENST00000475988 FAM89AQ96GI7 184 aa16.53■□□□□ 0.24
PKP1-204ENST00000475988 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
PKP1-204ENST00000475988 CIAO1O76071 339 aa16.52■□□□□ 0.24
PKP1-204ENST00000475988 ATG9AQ7Z3C6 839 aa16.52■□□□□ 0.24
PKP1-204ENST00000475988 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
PKP1-204ENST00000475988 RGPD3A6NKT7 1758 aaPredicted RBP16.51■□□□□ 0.23
PKP1-204ENST00000475988 RGPD4Q7Z3J3 1758 aa16.51■□□□□ 0.23
PKP1-204ENST00000475988 AK9Q5TCS8 1911 aa16.51■□□□□ 0.23
PKP1-204ENST00000475988 NTSR2O95665 410 aa16.51■□□□□ 0.23
PKP1-204ENST00000475988 KCNQ4P56696 695 aa16.51■□□□□ 0.23
PKP1-204ENST00000475988 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
PKP1-204ENST00000475988 EAF2Q96CJ1 260 aaPredicted RBP16.51■□□□□ 0.23
PKP1-204ENST00000475988 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
PKP1-204ENST00000475988 IRS4O14654 1257 aaPredicted RBP16.5■□□□□ 0.23
PKP1-204ENST00000475988 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
PKP1-204ENST00000475988 CTSWP56202 376 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 RTL5Q5HYW3 569 aaPredicted RBP16.5■□□□□ 0.23
PKP1-204ENST00000475988 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 SYNE4Q8N205 404 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
PKP1-204ENST00000475988 ARXQ96QS3 562 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 SIL1Q9H173 461 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 BCL2L12Q9HB09 334 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 GPR108Q9NPR9 543 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 CASZ1Q86V15 1759 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
PKP1-204ENST00000475988 RTL9Q8NET4 1388 aa16.5■□□□□ 0.23
PKP1-204ENST00000475988 EYA2O00167 538 aa16.49■□□□□ 0.23
PKP1-204ENST00000475988 ZNF609O15014 1411 aa16.49■□□□□ 0.23
PKP1-204ENST00000475988 PDE8AO60658 829 aa16.49■□□□□ 0.23
PKP1-204ENST00000475988 IL15P40933 162 aaPredicted RBP16.49■□□□□ 0.23
PKP1-204ENST00000475988 SLC27A3Q5K4L6 730 aa16.49■□□□□ 0.23
PKP1-204ENST00000475988 AACSQ86V21 672 aa16.49■□□□□ 0.23
PKP1-204ENST00000475988 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
PKP1-204ENST00000475988 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms