RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 CCDC8Q9H0W5 538 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 SH2B1Q9NRF2 756 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 DACT1Q9NYF0 836 aa16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 PIK3C2AO00443 1686 aa16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 FAM200AQ8TCP9 573 aa16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 ZSCAN31Q96LW9 406 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 NUP62CLQ9H1M0 184 aa16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 MAP3K11Q16584 847 aa16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 CCDC186Q7Z3E2 898 aa16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 TLR7Q9NYK1 1049 aaKnown RBP16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 KRT85P78386 507 aa16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 ANO6Q4KMQ2 910 aa16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 TM6SF1Q9BZW5 370 aa16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 C9orf78Q9NZ63 289 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 LARP1Q6PKG0 1096 aaKnown RBP16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 CBX8Q9HC52 389 aa16.09■□□□□ 0.17
ARHGEF39-203ENST00000475323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 PRAMEF22A3QJZ6 481 aa16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 SLC27A2O14975 620 aa16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 KCNB2Q92953 911 aa16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 MAP3K2Q9Y2U5 619 aa16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 U2AF2P26368 475 aaKnown RBP eCLIP16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 PDCL2Q8N4E4 241 aa16.08■□□□□ 0.16
ARHGEF39-203ENST00000475323 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 DRC7Q8IY82 874 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 EAF2Q96CJ1 260 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 C16orf45Q96MC5 204 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 SIL1Q9H173 461 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 TNMDQ9H2S6 317 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 BOLA2Q9H3K6 86 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 UBR1Q8IWV7 1749 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 DMTNQ08495 405 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 NBPF6Q5VWK0 638 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 MAP4K1Q92918 833 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 NBPF4Q96M43 638 aa16.07■□□□□ 0.16
ARHGEF39-203ENST00000475323 SASH1O94885 1247 aa16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 NAA30Q147X3 362 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 KLHDC4Q8TBB5 520 aa16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 EVI5LQ96CN4 794 aa16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 EDC3Q96F86 508 aaKnown RBP16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 BABAM1Q9NWV8 329 aa16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 GOLGA6L6A8MZA4 724 aa16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 IGSF3O75054 1194 aa16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 NR1I2O75469 434 aa16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 CHAF1AQ13111 956 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
ARHGEF39-203ENST00000475323 ZNF589Q86UQ0 364 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 SPATA32Q96LK8 384 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 GOLGA6L4A6NEF3 574 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 JAK2O60674 1132 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 CHGBP05060 677 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 TOB2Q14106 344 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 TRIM5Q9C035 493 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 BLOC1S2Q6QNY1 142 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 PGBD1Q96JS3 809 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
ARHGEF39-203ENST00000475323 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
ARHGEF39-203ENST00000475323 MTX1Q13505 466 aa16.04■□□□□ 0.16
ARHGEF39-203ENST00000475323 LRRC59Q96AG4 307 aaKnown RBP16.04■□□□□ 0.16
ARHGEF39-203ENST00000475323 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
ARHGEF39-203ENST00000475323 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
ARHGEF39-203ENST00000475323 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
ARHGEF39-203ENST00000475323 NDUFB9Q9Y6M9 179 aa16.04■□□□□ 0.16
ARHGEF39-203ENST00000475323 TPM3P06753 285 aa16.03■□□□□ 0.16
ARHGEF39-203ENST00000475323 TEFQ10587 303 aa16.03■□□□□ 0.16
ARHGEF39-203ENST00000475323 ANKRD7Q92527 254 aa16.03■□□□□ 0.16
ARHGEF39-203ENST00000475323 FSD1Q9BTV5 496 aa16.03■□□□□ 0.16
ARHGEF39-203ENST00000475323 A0A087WWV3 80 aa16.03■□□□□ 0.16
ARHGEF39-203ENST00000475323 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
ARHGEF39-203ENST00000475323 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
ARHGEF39-203ENST00000475323 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
ARHGEF39-203ENST00000475323 ELP1O95163 1332 aa16.02■□□□□ 0.16
ARHGEF39-203ENST00000475323 CTIFO43310 598 aaKnown RBP16.02■□□□□ 0.16
ARHGEF39-203ENST00000475323 RPS6KB1P23443 525 aa16.02■□□□□ 0.16
ARHGEF39-203ENST00000475323 ZNF75DP51815 510 aa16.02■□□□□ 0.16
ARHGEF39-203ENST00000475323 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
ARHGEF39-203ENST00000475323 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.16
ARHGEF39-203ENST00000475323 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF39-203ENST00000475323 DIP2AQ14689 1571 aa16.02■□□□□ 0.15
ARHGEF39-203ENST00000475323 FOSBP53539 338 aa16.02■□□□□ 0.15
ARHGEF39-203ENST00000475323 ARID5BQ14865 1188 aa16.02■□□□□ 0.15
ARHGEF39-203ENST00000475323 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.15
ARHGEF39-203ENST00000475323 BICD2Q8TD16 824 aa16.02■□□□□ 0.15
ARHGEF39-203ENST00000475323 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
ARHGEF39-203ENST00000475323 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
ARHGEF39-203ENST00000475323 PSMA5P28066 241 aa16.01■□□□□ 0.15
ARHGEF39-203ENST00000475323 ZNF165P49910 485 aa16.01■□□□□ 0.15
ARHGEF39-203ENST00000475323 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms